RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 STK31Q9BXU1 1019 aa21.47■■□□□ 1.03
LMNB2-201ENST00000325327 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
LMNB2-201ENST00000325327 PTPN23Q9H3S7 1636 aa21.46■■□□□ 1.03
LMNB2-201ENST00000325327 CCDC7Q96M83 1385 aa21.46■■□□□ 1.03
LMNB2-201ENST00000325327 TEFQ10587 303 aa21.46■■□□□ 1.03
LMNB2-201ENST00000325327 NGEFQ8N5V2 710 aa21.46■■□□□ 1.03
LMNB2-201ENST00000325327 SMC4Q9NTJ3 1288 aa21.46■■□□□ 1.03
LMNB2-201ENST00000325327 ADGRF5Q8IZF2 1346 aa21.46■■□□□ 1.03
LMNB2-201ENST00000325327 WDR7Q9Y4E6 1490 aa21.46■■□□□ 1.03
LMNB2-201ENST00000325327 C1orf141Q5JVX7 400 aa21.45■■□□□ 1.02
LMNB2-201ENST00000325327 RCAN3Q9UKA8 241 aa21.45■■□□□ 1.02
LMNB2-201ENST00000325327 RAPGEF6Q8TEU7 1601 aa21.45■■□□□ 1.02
LMNB2-201ENST00000325327 STRN4Q9NRL3 753 aa21.45■■□□□ 1.02
LMNB2-201ENST00000325327 DHX29Q7Z478 1369 aaKnown RBP21.45■■□□□ 1.02
LMNB2-201ENST00000325327 MTHFSP49914 203 aa21.44■■□□□ 1.02
LMNB2-201ENST00000325327 TRAPPC8Q9Y2L5 1435 aa21.44■■□□□ 1.02
LMNB2-201ENST00000325327 HSPA2P54652 639 aa21.44■■□□□ 1.02
LMNB2-201ENST00000325327 NECTIN2Q92692 538 aa21.44■■□□□ 1.02
LMNB2-201ENST00000325327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.44■■□□□ 1.024e-6■□□□□ 11.2
LMNB2-201ENST00000325327 GPRASP1Q5JY77 1395 aa21.43■■□□□ 1.02
LMNB2-201ENST00000325327 ITPRIPQ8IWB1 547 aa21.42■■□□□ 1.02
LMNB2-201ENST00000325327 UGGT2Q9NYU1 1516 aa21.41■■□□□ 1.02
LMNB2-201ENST00000325327 MS4A1P11836 297 aa21.41■■□□□ 1.02
LMNB2-201ENST00000325327 TAOK2Q9UL54 1235 aa21.4■■□□□ 1.02
LMNB2-201ENST00000325327 AMOTL2Q9Y2J4 779 aa21.4■■□□□ 1.02
LMNB2-201ENST00000325327 KIAA0556O60303 1618 aa21.4■■□□□ 1.02
LMNB2-201ENST00000325327 CHMP3Q9Y3E7 222 aa21.4■■□□□ 1.02
LMNB2-201ENST00000325327 ANKRD30BQ9BXX2 1392 aa21.4■■□□□ 1.02
LMNB2-201ENST00000325327 RAPGEF4Q8WZA2 1011 aa21.4■■□□□ 1.02
LMNB2-201ENST00000325327 DISP1Q96F81 1524 aa21.39■■□□□ 1.01
LMNB2-201ENST00000325327 EIF2S2P20042 333 aaKnown RBP21.39■■□□□ 1.01
LMNB2-201ENST00000325327 IPO8O15397 1037 aaKnown RBP21.39■■□□□ 1.01
LMNB2-201ENST00000325327 RPGRIP1LQ68CZ1 1315 aa21.38■■□□□ 1.01
LMNB2-201ENST00000325327 FOXO3O43524 673 aa21.38■■□□□ 1.01
LMNB2-201ENST00000325327 LMOD3Q0VAK6 560 aa21.38■■□□□ 1.01
LMNB2-201ENST00000325327 PTPRKQ15262 1439 aa21.37■■□□□ 1.01
LMNB2-201ENST00000325327 MSH5O43196 834 aa21.37■■□□□ 1.01
LMNB2-201ENST00000325327 RIPK4P57078 832 aa21.37■■□□□ 1.01
LMNB2-201ENST00000325327 ZC3H6P61129 1189 aaKnown RBP21.37■■□□□ 1.01
LMNB2-201ENST00000325327 GTF2E1P29083 439 aaPredicted RBP21.35■■□□□ 1.01
LMNB2-201ENST00000325327 RTEL1-TNFRSF6BF6WH68 1400 aa21.35■■□□□ 1.01
LMNB2-201ENST00000325327 ABCC2Q92887 1545 aa21.35■■□□□ 1.01
LMNB2-201ENST00000325327 PPP4R2Q9NY27 417 aa21.35■■□□□ 1.01
LMNB2-201ENST00000325327 NUDT16Q96DE0 195 aaKnown RBP21.34■■□□□ 1.01
LMNB2-201ENST00000325327 SYCP2Q9BX26 1530 aa21.33■■□□□ 1.01
LMNB2-201ENST00000325327 CHMP4BQ9H444 224 aaKnown RBP21.33■■□□□ 1.01
LMNB2-201ENST00000325327 MAP3K1Q13233 1512 aa21.33■■□□□ 1
LMNB2-201ENST00000325327 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1
LMNB2-201ENST00000325327 CCDC61Q9Y6R9 512 aa21.33■■□□□ 1
LMNB2-201ENST00000325327 CEP170Q5SW79 1584 aa21.32■■□□□ 1
LMNB2-201ENST00000325327 RRS1Q15050 365 aaKnown RBP21.31■■□□□ 1
LMNB2-201ENST00000325327 TTC5Q8N0Z6 440 aa21.31■■□□□ 1
LMNB2-201ENST00000325327 PRDM11Q9NQV5 511 aa21.31■■□□□ 1
LMNB2-201ENST00000325327 TEX14Q8IWB6 1497 aa21.3■■□□□ 1
LMNB2-201ENST00000325327 PLIN1O60240 522 aa21.3■■□□□ 1
LMNB2-201ENST00000325327 PPP6R1Q9UPN7 881 aa21.29■■□□□ 1
LMNB2-201ENST00000325327 ADAMTS8Q9UP79 889 aa21.28■■□□□ 1
LMNB2-201ENST00000325327 A2MP01023 1474 aa21.28■■□□□ 1
LMNB2-201ENST00000325327 KDM5BQ9UGL1 1544 aa21.28■■□□□ 1
LMNB2-201ENST00000325327 ABCA5Q8WWZ7 1642 aa21.27■■□□□ 1
LMNB2-201ENST00000325327 TNRQ92752 1358 aa21.26■□□□□ 0.99
LMNB2-201ENST00000325327 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
LMNB2-201ENST00000325327 NOS1P29475 1434 aa21.25■□□□□ 0.99
LMNB2-201ENST00000325327 KCNJ4P48050 445 aa21.25■□□□□ 0.99
LMNB2-201ENST00000325327 ZNF518AQ6AHZ1 1483 aa21.25■□□□□ 0.99
LMNB2-201ENST00000325327 CTTNBP2Q8WZ74 1663 aa21.25■□□□□ 0.99
LMNB2-201ENST00000325327 TAF7LQ5H9L4 462 aa21.25■□□□□ 0.99
LMNB2-201ENST00000325327 ZNF692Q9BU19 519 aaPredicted RBP21.25■□□□□ 0.99
LMNB2-201ENST00000325327 TOM1L2Q6ZVM7 507 aa21.24■□□□□ 0.99
LMNB2-201ENST00000325327 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
LMNB2-201ENST00000325327 PPP2R1AP30153 589 aa21.23■□□□□ 0.99
LMNB2-201ENST00000325327 PRKAR2BP31323 418 aa21.23■□□□□ 0.99
LMNB2-201ENST00000325327 SULT6B1Q6IMI4 303 aa21.23■□□□□ 0.99
LMNB2-201ENST00000325327 DDX54Q8TDD1 881 aaKnown RBP21.23■□□□□ 0.99
LMNB2-201ENST00000325327 ADAMTS2O95450 1211 aa21.22■□□□□ 0.99
LMNB2-201ENST00000325327 C11orf95C9JLR9 678 aaPredicted RBP21.22■□□□□ 0.99
LMNB2-201ENST00000325327 TPRNQ4KMQ1 711 aa21.21■□□□□ 0.99
LMNB2-201ENST00000325327 CASC1Q6TDU7 716 aa21.21■□□□□ 0.99
LMNB2-201ENST00000325327 CHMP4AQ9BY43 222 aa21.21■□□□□ 0.99
LMNB2-201ENST00000325327 RUNDC1Q96C34 613 aa21.2■□□□□ 0.98
LMNB2-201ENST00000325327 TCP11L2Q8N4U5 519 aa21.2■□□□□ 0.98
LMNB2-201ENST00000325327 TSPYL4Q9UJ04 414 aa21.2■□□□□ 0.98
LMNB2-201ENST00000325327 PDE3BQ13370 1112 aa21.18■□□□□ 0.98
LMNB2-201ENST00000325327 NAP1L2Q9ULW6 460 aaPredicted RBP21.18■□□□□ 0.98
LMNB2-201ENST00000325327 PHF8Q9UPP1 1060 aa21.18■□□□□ 0.98
LMNB2-201ENST00000325327 NME9Q86XW9 330 aa21.17■□□□□ 0.98
LMNB2-201ENST00000325327 CNTLNQ9NXG0 1405 aa21.17■□□□□ 0.98
LMNB2-201ENST00000325327 FGD1P98174 961 aa21.17■□□□□ 0.98
LMNB2-201ENST00000325327 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
LMNB2-201ENST00000325327 GORABQ5T7V8 394 aa21.17■□□□□ 0.98
LMNB2-201ENST00000325327 AIMP1Q12904 312 aaKnown RBP21.16■□□□□ 0.98
LMNB2-201ENST00000325327 ZNF428Q96B54 188 aa21.16■□□□□ 0.98
LMNB2-201ENST00000325327 E9PSI1 815 aa21.16■□□□□ 0.98
LMNB2-201ENST00000325327 ABCC10Q5T3U5 1492 aa21.15■□□□□ 0.98
LMNB2-201ENST00000325327 WASLO00401 505 aaPredicted RBP21.14■□□□□ 0.98
LMNB2-201ENST00000325327 ZMYM3Q14202 1370 aa21.14■□□□□ 0.98
LMNB2-201ENST00000325327 NBR1Q14596 966 aa21.14■□□□□ 0.98
LMNB2-201ENST00000325327 C14orf93Q9H972 538 aaKnown RBP21.14■□□□□ 0.98
LMNB2-201ENST00000325327 COG6Q9Y2V7 657 aa21.14■□□□□ 0.98
LMNB2-201ENST00000325327 NCKAP5LQ9HCH0 1330 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms