RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 ZNF335Q9H4Z2 1342 aaPredicted RBP22.91■■□□□ 1.26
TSFM-201ENST00000323833 LTBP4Q8N2S1 1624 aa22.91■■□□□ 1.26
TSFM-201ENST00000323833 HRCP23327 699 aa22.91■■□□□ 1.26
TSFM-201ENST00000323833 NUTM2DQ5VT03 806 aaPredicted RBP22.88■■□□□ 1.25
TSFM-201ENST00000323833 STRCP1A6NGW2 1772 aa22.88■■□□□ 1.25
TSFM-201ENST00000323833 ZNF326Q5BKZ1 582 aaKnown RBP22.86■■□□□ 1.25
TSFM-201ENST00000323833 PPP1R15AO75807 674 aaPredicted RBP22.85■■□□□ 1.25
TSFM-201ENST00000323833 TRIM26Q12899 539 aaPredicted RBP22.85■■□□□ 1.25
TSFM-201ENST00000323833 CERKQ8TCT0 537 aa22.85■■□□□ 1.25
TSFM-201ENST00000323833 HDGFP51858 240 aaKnown RBP22.84■■□□□ 1.25
TSFM-201ENST00000323833 CCDC144AA2RUR9 1427 aa22.83■■□□□ 1.25
TSFM-201ENST00000323833 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.83■■□□□ 1.25
TSFM-201ENST00000323833 NEXMIFQ5QGS0 1516 aa22.82■■□□□ 1.24
TSFM-201ENST00000323833 PPLO60437 1756 aa22.82■■□□□ 1.24
TSFM-201ENST00000323833 PLEKHG1Q9ULL1 1385 aa22.82■■□□□ 1.24
TSFM-201ENST00000323833 BCANQ96GW7 911 aa22.82■■□□□ 1.24
TSFM-201ENST00000323833 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
TSFM-201ENST00000323833 CHD2O14647 1828 aaKnown RBP22.77■■□□□ 1.24
TSFM-201ENST00000323833 IFT172Q9UG01 1749 aa22.77■■□□□ 1.23
TSFM-201ENST00000323833 NRXN3Q9Y4C0 1643 aa22.76■■□□□ 1.23
TSFM-201ENST00000323833 CPS1P31327 1500 aa22.76■■□□□ 1.23
TSFM-201ENST00000323833 ANKRD30BQ9BXX2 1392 aa22.76■■□□□ 1.23
TSFM-201ENST00000323833 SPATA31E1Q6ZUB1 1445 aa22.74■■□□□ 1.23
TSFM-201ENST00000323833 ADAMTS13Q76LX8 1427 aa22.74■■□□□ 1.23
TSFM-201ENST00000323833 RGL3Q3MIN7 710 aa22.73■■□□□ 1.23
TSFM-201ENST00000323833 XIRP1Q702N8 1843 aaKnown RBP22.73■■□□□ 1.23
TSFM-201ENST00000323833 DIP2AQ14689 1571 aa22.72■■□□□ 1.23
TSFM-201ENST00000323833 SETBP1Q9Y6X0 1596 aa22.72■■□□□ 1.23
TSFM-201ENST00000323833 RPGRIP1LQ68CZ1 1315 aa22.71■■□□□ 1.23
TSFM-201ENST00000323833 IQSEC2Q5JU85 1478 aa22.7■■□□□ 1.22
TSFM-201ENST00000323833 NWD1Q149M9 1564 aa22.69■■□□□ 1.22
TSFM-201ENST00000323833 TBX22Q9Y458 520 aa22.69■■□□□ 1.22
TSFM-201ENST00000323833 LRRC7Q96NW7 1537 aa22.68■■□□□ 1.22
TSFM-201ENST00000323833 FBXO41Q8TF61 875 aa22.68■■□□□ 1.22
TSFM-201ENST00000323833 VGFO15240 615 aaPredicted RBP22.67■■□□□ 1.22
TSFM-201ENST00000323833 KCNA6P17658 529 aa22.67■■□□□ 1.22
TSFM-201ENST00000323833 ILDR1Q86SU0 546 aaPredicted RBP22.67■■□□□ 1.22
TSFM-201ENST00000323833 SETD1AO15047 1707 aaKnown RBP22.67■■□□□ 1.22
TSFM-201ENST00000323833 ADGRF5Q8IZF2 1346 aa22.62■■□□□ 1.21
TSFM-201ENST00000323833 ALKQ9UM73 1620 aa22.62■■□□□ 1.21
TSFM-201ENST00000323833 PTPRUQ92729 1446 aa22.61■■□□□ 1.21
TSFM-201ENST00000323833 NKTRP30414 1462 aaKnown RBP22.6■■□□□ 1.21
TSFM-201ENST00000323833 METP08581 1390 aa22.6■■□□□ 1.21
TSFM-201ENST00000323833 PIK3R4Q99570 1358 aa22.6■■□□□ 1.21
TSFM-201ENST00000323833 XRN1Q8IZH2 1706 aaKnown RBP22.6■■□□□ 1.21
TSFM-201ENST00000323833 PROSER2Q86WR7 435 aaPredicted RBP22.59■■□□□ 1.21
TSFM-201ENST00000323833 RBM33Q96EV2 1170 aaKnown RBP22.59■■□□□ 1.21
TSFM-201ENST00000323833 DHX57Q6P158 1386 aaKnown RBP22.58■■□□□ 1.21
TSFM-201ENST00000323833 TMEM94Q12767 1356 aa22.56■■□□□ 1.2
TSFM-201ENST00000323833 UBAP1LF5GYI3 381 aa22.56■■□□□ 1.2
TSFM-201ENST00000323833 AMOTL2Q9Y2J4 779 aa22.56■■□□□ 1.2
TSFM-201ENST00000323833 MYOM2P54296 1465 aa22.55■■□□□ 1.2
TSFM-201ENST00000323833 PCGF6Q9BYE7 350 aa22.55■■□□□ 1.2
TSFM-201ENST00000323833 PIK3C2GO75747 1445 aa22.54■■□□□ 1.2
TSFM-201ENST00000323833 NRXN1Q9ULB1 1477 aa22.52■■□□□ 1.2
TSFM-201ENST00000323833 DCAF11Q8TEB1 546 aa22.51■■□□□ 1.19
TSFM-201ENST00000323833 KDM2AQ9Y2K7 1162 aa22.51■■□□□ 1.19
TSFM-201ENST00000323833 SIN3AQ96ST3 1273 aa22.5■■□□□ 1.19
TSFM-201ENST00000323833 LAMC1P11047 1609 aa22.49■■□□□ 1.19
TSFM-201ENST00000323833 ASXL1Q8IXJ9 1541 aa22.48■■□□□ 1.19
TSFM-201ENST00000323833 TOM1O60784 492 aa22.48■■□□□ 1.19
TSFM-201ENST00000323833 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.47■■□□□ 1.19
TSFM-201ENST00000323833 PIP4K2BP78356 416 aa22.46■■□□□ 1.19
TSFM-201ENST00000323833 NEUROD1Q13562 356 aa22.45■■□□□ 1.18
TSFM-201ENST00000323833 CFAP70Q5T0N1 1121 aa22.45■■□□□ 1.18
TSFM-201ENST00000323833 TMEM132EQ6IEE7 984 aa22.45■■□□□ 1.18
TSFM-201ENST00000323833 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
TSFM-201ENST00000323833 MSH6P52701 1360 aa22.44■■□□□ 1.18
TSFM-201ENST00000323833 KNDC1Q76NI1 1749 aa22.44■■□□□ 1.18
TSFM-201ENST00000323833 C14orf93Q9H972 538 aaKnown RBP22.44■■□□□ 1.18
TSFM-201ENST00000323833 NALCNQ8IZF0 1738 aa22.43■■□□□ 1.18
TSFM-201ENST00000323833 NCOA3Q9Y6Q9 1424 aa22.43■■□□□ 1.18
TSFM-201ENST00000323833 C14orf37Q86TY3 774 aa22.43■■□□□ 1.18
TSFM-201ENST00000323833 ROBO2Q9HCK4 1378 aa22.41■■□□□ 1.18
TSFM-201ENST00000323833 STK26Q9P289 416 aa22.41■■□□□ 1.18
TSFM-201ENST00000323833 PTCH1Q13635 1447 aa22.4■■□□□ 1.18
TSFM-201ENST00000323833 STAC3Q96MF2 364 aa22.4■■□□□ 1.18
TSFM-201ENST00000323833 PRAG1Q86YV5 1406 aa22.4■■□□□ 1.18
TSFM-201ENST00000323833 YTHDC2Q9H6S0 1430 aaKnown RBP22.39■■□□□ 1.17
TSFM-201ENST00000323833 LRPPRCP42704 1394 aaKnown RBP22.38■■□□□ 1.17
TSFM-201ENST00000323833 L3MBTL2Q969R5 705 aa22.37■■□□□ 1.17
TSFM-201ENST00000323833 C19orf44Q9H6X5 657 aa22.37■■□□□ 1.17
TSFM-201ENST00000323833 KIAA1210Q9ULL0 1709 aa22.37■■□□□ 1.17
TSFM-201ENST00000323833 TECPR2O15040 1411 aa22.36■■□□□ 1.17
TSFM-201ENST00000323833 ADGRB1O14514 1584 aa22.36■■□□□ 1.17
TSFM-201ENST00000323833 ROBO1Q9Y6N7 1651 aa22.36■■□□□ 1.17
TSFM-201ENST00000323833 ABCC11Q96J66 1382 aa22.35■■□□□ 1.17
TSFM-201ENST00000323833 ADGRL3Q9HAR2 1447 aa22.34■■□□□ 1.17
TSFM-201ENST00000323833 ATF3P18847 181 aa22.33■■□□□ 1.17
TSFM-201ENST00000323833 WAPLQ7Z5K2 1190 aa22.32■■□□□ 1.16
TSFM-201ENST00000323833 PLEKHH1Q9ULM0 1364 aa22.31■■□□□ 1.16
TSFM-201ENST00000323833 CADPS2Q86UW7 1296 aa22.31■■□□□ 1.16
TSFM-201ENST00000323833 SLAIN2Q9P270 581 aa22.31■■□□□ 1.16
TSFM-201ENST00000323833 DCCP43146 1447 aa22.31■■□□□ 1.16
TSFM-201ENST00000323833 HSPA1LP34931 641 aa22.29■■□□□ 1.16
TSFM-201ENST00000323833 FAM135BQ49AJ0 1406 aa22.29■■□□□ 1.16
TSFM-201ENST00000323833 ARHGEF28Q8N1W1 1705 aaKnown RBP22.28■■□□□ 1.16
TSFM-201ENST00000323833 TRPM1Q7Z4N2 1603 aa22.28■■□□□ 1.16
TSFM-201ENST00000323833 DLC1Q96QB1 1528 aa22.27■■□□□ 1.16
TSFM-201ENST00000323833 TRAK1Q9UPV9 953 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms