RNA–Protein interactions for RNA: ENST00000323250.9

TYMS-202, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-202ENST00000323250 TRIM52Q96A61 297 aa26.62■■□□□ 1.85
TYMS-202ENST00000323250 PLEKHG1Q9ULL1 1385 aa26.58■■□□□ 1.85
TYMS-202ENST00000323250 ALKQ9UM73 1620 aa26.58■■□□□ 1.85
TYMS-202ENST00000323250 BCANQ96GW7 911 aa26.58■■□□□ 1.85
TYMS-202ENST00000323250 PPP1R15AO75807 674 aaPredicted RBP26.57■■□□□ 1.84
TYMS-202ENST00000323250 KCNA6P17658 529 aa26.57■■□□□ 1.84
TYMS-202ENST00000323250 PIP4K2BP78356 416 aa26.57■■□□□ 1.84
TYMS-202ENST00000323250 TOM1O60784 492 aa26.56■■□□□ 1.84
TYMS-202ENST00000323250 HDGFP51858 240 aaKnown RBP26.55■■□□□ 1.84
TYMS-202ENST00000323250 SPHKAPQ2M3C7 1700 aa26.54■■□□□ 1.84
TYMS-202ENST00000323250 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.54■■□□□ 1.84
TYMS-202ENST00000323250 RBM33Q96EV2 1170 aaKnown RBP26.53■■□□□ 1.84
TYMS-202ENST00000323250 SLC4A1APQ9BWU0 796 aaKnown RBP26.52■■□□□ 1.84
TYMS-202ENST00000323250 SCAF1Q9H7N4 1312 aaKnown RBP26.52■■□□□ 1.84
TYMS-202ENST00000323250 ADAMTS13Q76LX8 1427 aa26.5■■□□□ 1.83
TYMS-202ENST00000323250 CLTCL1P53675 1640 aa26.5■■□□□ 1.83
TYMS-202ENST00000323250 TRPM2O94759 1503 aa26.49■■□□□ 1.83
TYMS-202ENST00000323250 FOXD1Q16676 465 aa26.49■■□□□ 1.83
TYMS-202ENST00000323250 TBX22Q9Y458 520 aa26.49■■□□□ 1.83
TYMS-202ENST00000323250 TMEM94Q12767 1356 aa26.48■■□□□ 1.83
TYMS-202ENST00000323250 HSPA1LP34931 641 aa26.47■■□□□ 1.83
TYMS-202ENST00000323250 XIRP1Q702N8 1843 aaKnown RBP26.46■■□□□ 1.83
TYMS-202ENST00000323250 ZNF326Q5BKZ1 582 aaKnown RBP26.46■■□□□ 1.83
TYMS-202ENST00000323250 PROSER2Q86WR7 435 aaPredicted RBP26.46■■□□□ 1.83
TYMS-202ENST00000323250 NWD1Q149M9 1564 aa26.45■■□□□ 1.82
TYMS-202ENST00000323250 MPHOSPH9Q99550 1183 aa26.41■■□□□ 1.82
TYMS-202ENST00000323250 NKTRP30414 1462 aaKnown RBP26.4■■□□□ 1.82
TYMS-202ENST00000323250 SETD5Q9C0A6 1442 aa26.39■■□□□ 1.81
TYMS-202ENST00000323250 CHD2O14647 1828 aaKnown RBP26.37■■□□□ 1.81
TYMS-202ENST00000323250 NEXMIFQ5QGS0 1516 aa26.37■■□□□ 1.81
TYMS-202ENST00000323250 PTPRUQ92729 1446 aa26.37■■□□□ 1.81
TYMS-202ENST00000323250 NRXN3Q9Y4C0 1643 aa26.36■■□□□ 1.81
TYMS-202ENST00000323250 DIP2AQ14689 1571 aa26.34■■□□□ 1.81
TYMS-202ENST00000323250 PIK3R4Q99570 1358 aa26.33■■□□□ 1.81
TYMS-202ENST00000323250 AMOTL2Q9Y2J4 779 aa26.33■■□□□ 1.81
TYMS-202ENST00000323250 SETBP1Q9Y6X0 1596 aa26.33■■□□□ 1.8
TYMS-202ENST00000323250 METP08581 1390 aa26.33■■□□□ 1.8
TYMS-202ENST00000323250 DISP3Q9P2K9 1392 aa26.33■■□□□ 1.8
TYMS-202ENST00000323250 RAB3GAP2Q9H2M9 1393 aa26.32■■□□□ 1.8
TYMS-202ENST00000323250 KIF1BO60333 1816 aa26.3■■□□□ 1.8
TYMS-202ENST00000323250 MSH6P52701 1360 aa26.27■■□□□ 1.8
TYMS-202ENST00000323250 FAM135BQ49AJ0 1406 aa26.26■■□□□ 1.79
TYMS-202ENST00000323250 RPGRIP1LQ68CZ1 1315 aa26.25■■□□□ 1.79
TYMS-202ENST00000323250 CCDC144AA2RUR9 1427 aa26.24■■□□□ 1.79
TYMS-202ENST00000323250 VGFO15240 615 aaPredicted RBP26.24■■□□□ 1.79
TYMS-202ENST00000323250 SPATA31E1Q6ZUB1 1445 aa26.23■■□□□ 1.79
TYMS-202ENST00000323250 NCOA3Q9Y6Q9 1424 aa26.23■■□□□ 1.79
TYMS-202ENST00000323250 RGL3Q3MIN7 710 aa26.22■■□□□ 1.79
TYMS-202ENST00000323250 ILDR2Q71H61 639 aa26.22■■□□□ 1.79
TYMS-202ENST00000323250 SLAIN2Q9P270 581 aa26.22■■□□□ 1.79
TYMS-202ENST00000323250 C14orf37Q86TY3 774 aa26.21■■□□□ 1.79
TYMS-202ENST00000323250 ACIN1Q9UKV3 1341 aaKnown RBP26.2■■□□□ 1.79
TYMS-202ENST00000323250 XRN1Q8IZH2 1706 aaKnown RBP26.2■■□□□ 1.79
TYMS-202ENST00000323250 C19orf44Q9H6X5 657 aa26.19■■□□□ 1.78
TYMS-202ENST00000323250 ADGRF5Q8IZF2 1346 aa26.18■■□□□ 1.78
TYMS-202ENST00000323250 PPLO60437 1756 aa26.16■■□□□ 1.78
TYMS-202ENST00000323250 ROBO1Q9Y6N7 1651 aa26.15■■□□□ 1.78
TYMS-202ENST00000323250 SETD1AO15047 1707 aaKnown RBP26.14■■□□□ 1.77
TYMS-202ENST00000323250 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.14■■□□□ 1.77
TYMS-202ENST00000323250 MED1Q15648 1581 aaPredicted RBP26.12■■□□□ 1.77
TYMS-202ENST00000323250 ATF3P18847 181 aa26.12■■□□□ 1.77
TYMS-202ENST00000323250 CADPS2Q86UW7 1296 aa26.12■■□□□ 1.77
TYMS-202ENST00000323250 HRCP23327 699 aa26.11■■□□□ 1.77
TYMS-202ENST00000323250 ANKRD30BQ9BXX2 1392 aa26.09■■□□□ 1.77
TYMS-202ENST00000323250 ROBO2Q9HCK4 1378 aa26.09■■□□□ 1.77
TYMS-202ENST00000323250 IFT172Q9UG01 1749 aa26.05■■□□□ 1.76
TYMS-202ENST00000323250 PTCH1Q13635 1447 aa26.05■■□□□ 1.76
TYMS-202ENST00000323250 ADGRL3Q9HAR2 1447 aa26.05■■□□□ 1.76
TYMS-202ENST00000323250 DCCP43146 1447 aa26.04■■□□□ 1.76
TYMS-202ENST00000323250 BRINP3Q76B58 766 aa26.03■■□□□ 1.76
TYMS-202ENST00000323250 PIK3C2GO75747 1445 aa26.03■■□□□ 1.76
TYMS-202ENST00000323250 PRAG1Q86YV5 1406 aa26.03■■□□□ 1.76
TYMS-202ENST00000323250 TMEM132EQ6IEE7 984 aa26.02■■□□□ 1.76
TYMS-202ENST00000323250 MST1RQ04912 1400 aa26.02■■□□□ 1.76
TYMS-202ENST00000323250 ASXL1Q8IXJ9 1541 aa25.99■■□□□ 1.75
TYMS-202ENST00000323250 STK26Q9P289 416 aa25.99■■□□□ 1.75
TYMS-202ENST00000323250 NALCNQ8IZF0 1738 aa25.99■■□□□ 1.75
TYMS-202ENST00000323250 NRXN1Q9ULB1 1477 aa25.98■■□□□ 1.75
TYMS-202ENST00000323250 PHLPP1O60346 1717 aa25.97■■□□□ 1.75
TYMS-202ENST00000323250 C14orf93Q9H972 538 aaKnown RBP25.96■■□□□ 1.75
TYMS-202ENST00000323250 COL16A1Q07092 1604 aaPredicted RBP25.96■■□□□ 1.75
TYMS-202ENST00000323250 LRPPRCP42704 1394 aaKnown RBP25.95■■□□□ 1.75
TYMS-202ENST00000323250 CFAP70Q5T0N1 1121 aa25.95■■□□□ 1.74
TYMS-202ENST00000323250 WAPLQ7Z5K2 1190 aa25.95■■□□□ 1.74
TYMS-202ENST00000323250 RGS17Q9UGC6 210 aaPredicted RBP25.94■■□□□ 1.74
TYMS-202ENST00000323250 MYOM2P54296 1465 aa25.93■■□□□ 1.74
TYMS-202ENST00000323250 DDX17Q92841 729 aaKnown RBP25.93■■□□□ 1.74
TYMS-202ENST00000323250 PHF23Q9BUL5 403 aaPredicted RBP25.93■■□□□ 1.74
TYMS-202ENST00000323250 AHDC1Q5TGY3 1603 aaPredicted RBP25.92■■□□□ 1.74
TYMS-202ENST00000323250 TECPR2O15040 1411 aa25.92■■□□□ 1.74
TYMS-202ENST00000323250 ABCC11Q96J66 1382 aa25.92■■□□□ 1.74
TYMS-202ENST00000323250 JCADQ9P266 1359 aa25.92■■□□□ 1.74
TYMS-202ENST00000323250 PLEKHH1Q9ULM0 1364 aa25.92■■□□□ 1.74
TYMS-202ENST00000323250 C1orf167Q5SNV9 1468 aa25.91■■□□□ 1.74
TYMS-202ENST00000323250 YTHDC2Q9H6S0 1430 aaKnown RBP25.89■■□□□ 1.74
TYMS-202ENST00000323250 KDM2AQ9Y2K7 1162 aa25.89■■□□□ 1.74
TYMS-202ENST00000323250 DHX57Q6P158 1386 aaKnown RBP25.88■■□□□ 1.73
TYMS-202ENST00000323250 DCAF11Q8TEB1 546 aa25.88■■□□□ 1.73
TYMS-202ENST00000323250 ORAI2Q96SN7 254 aa25.88■■□□□ 1.73
TYMS-202ENST00000323250 SOCS7O14512 581 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms