RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 ILDR1Q86SU0 546 aaPredicted RBP34.7■■■■□ 3.15
TNFSF12-202ENST00000322272 FBXO41Q8TF61 875 aa34.66■■■■□ 3.14
TNFSF12-202ENST00000322272 MYO5BQ9ULV0 1848 aa34.64■■■■□ 3.14
TNFSF12-202ENST00000322272 MPHOSPH9Q99550 1183 aa34.64■■■■□ 3.14
TNFSF12-202ENST00000322272 TRPM2O94759 1503 aa34.64■■■■□ 3.14
TNFSF12-202ENST00000322272 ZFYVE9O95405 1425 aa34.63■■■■□ 3.13
TNFSF12-202ENST00000322272 RIMS2Q9UQ26 1411 aa34.63■■■■□ 3.13
TNFSF12-202ENST00000322272 FOXD1Q16676 465 aa34.63■■■■□ 3.13
TNFSF12-202ENST00000322272 HDGFP51858 240 aaKnown RBP34.62■■■■□ 3.13
TNFSF12-202ENST00000322272 PPP1R15AO75807 674 aaPredicted RBP34.59■■■■□ 3.13
TNFSF12-202ENST00000322272 CLTCL1P53675 1640 aa34.58■■■■□ 3.13
TNFSF12-202ENST00000322272 NUTM2DQ5VT03 806 aaPredicted RBP34.56■■■■□ 3.12
TNFSF12-202ENST00000322272 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.56■■■■□ 3.12
TNFSF12-202ENST00000322272 BCANQ96GW7 911 aa34.56■■■■□ 3.12
TNFSF12-202ENST00000322272 SENP3Q9H4L4 574 aaPredicted RBP34.56■■■■□ 3.12
TNFSF12-202ENST00000322272 ZNF326Q5BKZ1 582 aaKnown RBP34.54■■■■□ 3.12
TNFSF12-202ENST00000322272 SLC26A8Q96RN1 970 aa34.54■■■■□ 3.12
TNFSF12-202ENST00000322272 CPS1P31327 1500 aa34.52■■■■□ 3.12
TNFSF12-202ENST00000322272 PLEKHG1Q9ULL1 1385 aa34.52■■■■□ 3.12
TNFSF12-202ENST00000322272 IQSEC2Q5JU85 1478 aa34.5■■■■□ 3.11
TNFSF12-202ENST00000322272 KIF1BO60333 1816 aa34.43■■■■□ 3.1
TNFSF12-202ENST00000322272 CCDC144AA2RUR9 1427 aa34.43■■■■□ 3.1
TNFSF12-202ENST00000322272 STRCP1A6NGW2 1772 aa34.42■■■■□ 3.1
TNFSF12-202ENST00000322272 KCNA6P17658 529 aa34.37■■■■□ 3.09
TNFSF12-202ENST00000322272 TBX22Q9Y458 520 aa34.37■■■■□ 3.09
TNFSF12-202ENST00000322272 NEXMIFQ5QGS0 1516 aa34.36■■■■□ 3.09
TNFSF12-202ENST00000322272 LRRC7Q96NW7 1537 aa34.36■■■■□ 3.09
TNFSF12-202ENST00000322272 ADAMTS13Q76LX8 1427 aa34.36■■■■□ 3.09
TNFSF12-202ENST00000322272 UBAP1LF5GYI3 381 aa34.33■■■■□ 3.09
TNFSF12-202ENST00000322272 RPGRIP1LQ68CZ1 1315 aa34.31■■■■□ 3.08
TNFSF12-202ENST00000322272 RGL3Q3MIN7 710 aa34.29■■■■□ 3.08
TNFSF12-202ENST00000322272 VGFO15240 615 aaPredicted RBP34.28■■■■□ 3.08
TNFSF12-202ENST00000322272 DIP2AQ14689 1571 aa34.28■■■■□ 3.08
TNFSF12-202ENST00000322272 SPATA31E1Q6ZUB1 1445 aa34.27■■■■□ 3.08
TNFSF12-202ENST00000322272 SETBP1Q9Y6X0 1596 aa34.25■■■■□ 3.07
TNFSF12-202ENST00000322272 NWD1Q149M9 1564 aa34.25■■■■□ 3.07
TNFSF12-202ENST00000322272 PROSER2Q86WR7 435 aaPredicted RBP34.24■■■■□ 3.07
TNFSF12-202ENST00000322272 NRXN3Q9Y4C0 1643 aa34.23■■■■□ 3.07
TNFSF12-202ENST00000322272 TOM1O60784 492 aa34.22■■■■□ 3.07
TNFSF12-202ENST00000322272 ANKRD30BQ9BXX2 1392 aa34.22■■■■□ 3.07
TNFSF12-202ENST00000322272 NKTRP30414 1462 aaKnown RBP34.22■■■■□ 3.07
TNFSF12-202ENST00000322272 TMEM94Q12767 1356 aa34.22■■■■□ 3.07
TNFSF12-202ENST00000322272 PIK3R4Q99570 1358 aa34.22■■■■□ 3.07
TNFSF12-202ENST00000322272 RBM33Q96EV2 1170 aaKnown RBP34.21■■■■□ 3.07
TNFSF12-202ENST00000322272 CHD2O14647 1828 aaKnown RBP34.2■■■■□ 3.07
TNFSF12-202ENST00000322272 SIN3AQ96ST3 1273 aa34.18■■■■□ 3.06
TNFSF12-202ENST00000322272 PPLO60437 1756 aa34.18■■■■□ 3.06
TNFSF12-202ENST00000322272 TIMELESSQ9UNS1 1208 aa34.15■■■■□ 3.06
TNFSF12-202ENST00000322272 AMOTL2Q9Y2J4 779 aa34.15■■■■□ 3.06
TNFSF12-202ENST00000322272 METP08581 1390 aa34.15■■■■□ 3.06
TNFSF12-202ENST00000322272 PIP4K2BP78356 416 aa34.15■■■■□ 3.06
TNFSF12-202ENST00000322272 PTPRUQ92729 1446 aa34.15■■■■□ 3.06
TNFSF12-202ENST00000322272 SCAF1Q9H7N4 1312 aaKnown RBP34.14■■■■□ 3.06
TNFSF12-202ENST00000322272 XIRP1Q702N8 1843 aaKnown RBP34.13■■■■□ 3.05
TNFSF12-202ENST00000322272 NEUROD1Q13562 356 aa34.13■■■■□ 3.05
TNFSF12-202ENST00000322272 ADGRF5Q8IZF2 1346 aa34.12■■■■□ 3.05
TNFSF12-202ENST00000322272 ALKQ9UM73 1620 aa34.09■■■■□ 3.05
TNFSF12-202ENST00000322272 TONSLQ96HA7 1378 aa34.06■■■■□ 3.04
TNFSF12-202ENST00000322272 IFT172Q9UG01 1749 aa34.06■■■■□ 3.04
TNFSF12-202ENST00000322272 MSH6P52701 1360 aa34.03■■■■□ 3.04
TNFSF12-202ENST00000322272 C14orf37Q86TY3 774 aa34.02■■■■□ 3.04
TNFSF12-202ENST00000322272 XRN1Q8IZH2 1706 aaKnown RBP34.02■■■■□ 3.04
TNFSF12-202ENST00000322272 NCOA3Q9Y6Q9 1424 aa34.01■■■■□ 3.03
TNFSF12-202ENST00000322272 SETD1AO15047 1707 aaKnown RBP34■■■■□ 3.03
TNFSF12-202ENST00000322272 PIK3C2GO75747 1445 aa33.99■■■■□ 3.03
TNFSF12-202ENST00000322272 MYOM2P54296 1465 aa33.96■■■■□ 3.03
TNFSF12-202ENST00000322272 DCAF11Q8TEB1 546 aa33.93■■■■□ 3.02
TNFSF12-202ENST00000322272 C19orf44Q9H6X5 657 aa33.92■■■■□ 3.02
TNFSF12-202ENST00000322272 NRXN1Q9ULB1 1477 aa33.92■■■■□ 3.02
TNFSF12-202ENST00000322272 HSPA1LP34931 641 aa33.91■■■■□ 3.02
TNFSF12-202ENST00000322272 KDM2AQ9Y2K7 1162 aa33.9■■■■□ 3.02
TNFSF12-202ENST00000322272 PTCH1Q13635 1447 aa33.88■■■■□ 3.01
TNFSF12-202ENST00000322272 TMEM132EQ6IEE7 984 aa33.88■■■■□ 3.01
TNFSF12-202ENST00000322272 ROBO2Q9HCK4 1378 aa33.87■■■■□ 3.01
TNFSF12-202ENST00000322272 C14orf93Q9H972 538 aaKnown RBP33.87■■■■□ 3.01
TNFSF12-202ENST00000322272 SLAIN2Q9P270 581 aa33.87■■■■□ 3.01
TNFSF12-202ENST00000322272 ATF3P18847 181 aa33.86■■■■□ 3.01
TNFSF12-202ENST00000322272 CFAP70Q5T0N1 1121 aa33.86■■■■□ 3.01
TNFSF12-202ENST00000322272 CADPS2Q86UW7 1296 aa33.85■■■■□ 3.01
TNFSF12-202ENST00000322272 STK26Q9P289 416 aa33.85■■■■□ 3.01
TNFSF12-202ENST00000322272 PRAG1Q86YV5 1406 aa33.84■■■■□ 3.01
TNFSF12-202ENST00000322272 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.84■■■■□ 3.01
TNFSF12-202ENST00000322272 FAM135BQ49AJ0 1406 aa33.84■■■■□ 3.01
TNFSF12-202ENST00000322272 ASXL1Q8IXJ9 1541 aa33.83■■■■□ 3.01
TNFSF12-202ENST00000322272 STAC3Q96MF2 364 aa33.82■■■■□ 3.01
TNFSF12-202ENST00000322272 LRPPRCP42704 1394 aaKnown RBP33.81■■■■□ 3
TNFSF12-202ENST00000322272 ADGRL3Q9HAR2 1447 aa33.8■■■■□ 3
TNFSF12-202ENST00000322272 DCCP43146 1447 aa33.78■■■■□ 3
TNFSF12-202ENST00000322272 YTHDC2Q9H6S0 1430 aaKnown RBP33.77■■■■□ 3
TNFSF12-202ENST00000322272 LAMC1P11047 1609 aa33.77■■■■□ 3
TNFSF12-202ENST00000322272 ABCC11Q96J66 1382 aa33.77■■■■□ 3
TNFSF12-202ENST00000322272 ROBO1Q9Y6N7 1651 aa33.76■■■■□ 3
TNFSF12-202ENST00000322272 TECPR2O15040 1411 aa33.76■■■■□ 3
TNFSF12-202ENST00000322272 L3MBTL2Q969R5 705 aa33.75■■■□□ 2.99
TNFSF12-202ENST00000322272 NALCNQ8IZF0 1738 aa33.73■■■□□ 2.99
TNFSF12-202ENST00000322272 WAPLQ7Z5K2 1190 aa33.72■■■□□ 2.99
TNFSF12-202ENST00000322272 KNDC1Q76NI1 1749 aa33.68■■■□□ 2.98
TNFSF12-202ENST00000322272 MST1RQ04912 1400 aa33.68■■■□□ 2.98
TNFSF12-202ENST00000322272 PLEKHH1Q9ULM0 1364 aa33.67■■■□□ 2.98
TNFSF12-202ENST00000322272 ADGRB1O14514 1584 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms