RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 PLEKHG1Q9ULL1 1385 aa14.93□□□□□ -0.02
CCDC65-202ENST00000320516 TRIM52Q96A61 297 aa14.93□□□□□ -0.02
CCDC65-202ENST00000320516 SLC26A8Q96RN1 970 aa14.93□□□□□ -0.02
CCDC65-202ENST00000320516 TRPM2O94759 1503 aa14.92□□□□□ -0.02
CCDC65-202ENST00000320516 HDGFP51858 240 aaKnown RBP14.92□□□□□ -0.02
CCDC65-202ENST00000320516 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.9□□□□□ -0.02
CCDC65-202ENST00000320516 SLC4A1APQ9BWU0 796 aaKnown RBP14.9□□□□□ -0.02
CCDC65-202ENST00000320516 CLTCL1P53675 1640 aa14.9□□□□□ -0.02
CCDC65-202ENST00000320516 ALKQ9UM73 1620 aa14.9□□□□□ -0.02
CCDC65-202ENST00000320516 PPP1R15AO75807 674 aaPredicted RBP14.89□□□□□ -0.03
CCDC65-202ENST00000320516 KCNA6P17658 529 aa14.89□□□□□ -0.03
CCDC65-202ENST00000320516 ADAMTS13Q76LX8 1427 aa14.88□□□□□ -0.03
CCDC65-202ENST00000320516 NUTM2DQ5VT03 806 aaPredicted RBP14.88□□□□□ -0.03
CCDC65-202ENST00000320516 NWD1Q149M9 1564 aa14.87□□□□□ -0.03
CCDC65-202ENST00000320516 TOM1O60784 492 aa14.87□□□□□ -0.03
CCDC65-202ENST00000320516 TBX22Q9Y458 520 aa14.87□□□□□ -0.03
CCDC65-202ENST00000320516 XIRP1Q702N8 1843 aaKnown RBP14.86□□□□□ -0.03
CCDC65-202ENST00000320516 BCANQ96GW7 911 aa14.86□□□□□ -0.03
CCDC65-202ENST00000320516 SETD5Q9C0A6 1442 aa14.86□□□□□ -0.03
CCDC65-202ENST00000320516 NKTRP30414 1462 aaKnown RBP14.85□□□□□ -0.03
CCDC65-202ENST00000320516 MPHOSPH9Q99550 1183 aa14.84□□□□□ -0.03
CCDC65-202ENST00000320516 TMEM94Q12767 1356 aa14.84□□□□□ -0.03
CCDC65-202ENST00000320516 NEXMIFQ5QGS0 1516 aa14.84□□□□□ -0.03
CCDC65-202ENST00000320516 DIP2AQ14689 1571 aa14.84□□□□□ -0.03
CCDC65-202ENST00000320516 CHD2O14647 1828 aaKnown RBP14.84□□□□□ -0.03
CCDC65-202ENST00000320516 FOXD1Q16676 465 aa14.83□□□□□ -0.03
CCDC65-202ENST00000320516 KIF1BO60333 1816 aa14.83□□□□□ -0.04
CCDC65-202ENST00000320516 ACIN1Q9UKV3 1341 aaKnown RBP14.83□□□□□ -0.04
CCDC65-202ENST00000320516 ZNF326Q5BKZ1 582 aaKnown RBP14.83□□□□□ -0.04
CCDC65-202ENST00000320516 NRXN3Q9Y4C0 1643 aa14.82□□□□□ -0.04
CCDC65-202ENST00000320516 SETBP1Q9Y6X0 1596 aa14.82□□□□□ -0.04
CCDC65-202ENST00000320516 PIK3R4Q99570 1358 aa14.82□□□□□ -0.04
CCDC65-202ENST00000320516 PIP4K2BP78356 416 aa14.82□□□□□ -0.04
CCDC65-202ENST00000320516 RAB3GAP2Q9H2M9 1393 aa14.81□□□□□ -0.04
CCDC65-202ENST00000320516 PROSER2Q86WR7 435 aaPredicted RBP14.81□□□□□ -0.04
CCDC65-202ENST00000320516 RBM33Q96EV2 1170 aaKnown RBP14.8□□□□□ -0.04
CCDC65-202ENST00000320516 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
CCDC65-202ENST00000320516 HSPA1LP34931 641 aa14.78□□□□□ -0.04
CCDC65-202ENST00000320516 PTPRUQ92729 1446 aa14.78□□□□□ -0.04
CCDC65-202ENST00000320516 RPGRIP1LQ68CZ1 1315 aa14.77□□□□□ -0.04
CCDC65-202ENST00000320516 CCDC144AA2RUR9 1427 aa14.77□□□□□ -0.05
CCDC65-202ENST00000320516 SPATA31E1Q6ZUB1 1445 aa14.76□□□□□ -0.05
CCDC65-202ENST00000320516 NCOA3Q9Y6Q9 1424 aa14.76□□□□□ -0.05
CCDC65-202ENST00000320516 METP08581 1390 aa14.75□□□□□ -0.05
CCDC65-202ENST00000320516 VGFO15240 615 aaPredicted RBP14.75□□□□□ -0.05
CCDC65-202ENST00000320516 HRCP23327 699 aa14.75□□□□□ -0.05
CCDC65-202ENST00000320516 AMOTL2Q9Y2J4 779 aa14.75□□□□□ -0.05
CCDC65-202ENST00000320516 XRN1Q8IZH2 1706 aaKnown RBP14.74□□□□□ -0.05
CCDC65-202ENST00000320516 PPLO60437 1756 aa14.74□□□□□ -0.05
CCDC65-202ENST00000320516 MSH6P52701 1360 aa14.73□□□□□ -0.05
CCDC65-202ENST00000320516 FAM135BQ49AJ0 1406 aa14.73□□□□□ -0.05
CCDC65-202ENST00000320516 SETD1AO15047 1707 aaKnown RBP14.72□□□□□ -0.05
CCDC65-202ENST00000320516 RGL3Q3MIN7 710 aa14.7□□□□□ -0.06
CCDC65-202ENST00000320516 IFT172Q9UG01 1749 aa14.7□□□□□ -0.06
CCDC65-202ENST00000320516 C19orf44Q9H6X5 657 aa14.69□□□□□ -0.06
CCDC65-202ENST00000320516 ADGRF5Q8IZF2 1346 aa14.69□□□□□ -0.06
CCDC65-202ENST00000320516 ANKRD30BQ9BXX2 1392 aa14.69□□□□□ -0.06
CCDC65-202ENST00000320516 SLAIN2Q9P270 581 aa14.68□□□□□ -0.06
CCDC65-202ENST00000320516 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.68□□□□□ -0.06
CCDC65-202ENST00000320516 ROBO1Q9Y6N7 1651 aa14.68□□□□□ -0.06
CCDC65-202ENST00000320516 DISP3Q9P2K9 1392 aa14.67□□□□□ -0.06
CCDC65-202ENST00000320516 PRAG1Q86YV5 1406 aa14.67□□□□□ -0.06
CCDC65-202ENST00000320516 C14orf37Q86TY3 774 aa14.66□□□□□ -0.06
CCDC65-202ENST00000320516 CADPS2Q86UW7 1296 aa14.66□□□□□ -0.06
CCDC65-202ENST00000320516 PTCH1Q13635 1447 aa14.65□□□□□ -0.06
CCDC65-202ENST00000320516 PIK3C2GO75747 1445 aa14.65□□□□□ -0.06
CCDC65-202ENST00000320516 DCCP43146 1447 aa14.65□□□□□ -0.06
CCDC65-202ENST00000320516 ROBO2Q9HCK4 1378 aa14.63□□□□□ -0.07
CCDC65-202ENST00000320516 ATF3P18847 181 aa14.63□□□□□ -0.07
CCDC65-202ENST00000320516 NRXN1Q9ULB1 1477 aa14.63□□□□□ -0.07
CCDC65-202ENST00000320516 ADGRL3Q9HAR2 1447 aa14.63□□□□□ -0.07
CCDC65-202ENST00000320516 MED1Q15648 1581 aaPredicted RBP14.62□□□□□ -0.07
CCDC65-202ENST00000320516 ASXL1Q8IXJ9 1541 aa14.62□□□□□ -0.07
CCDC65-202ENST00000320516 MYOM2P54296 1465 aa14.62□□□□□ -0.07
CCDC65-202ENST00000320516 NALCNQ8IZF0 1738 aa14.61□□□□□ -0.07
CCDC65-202ENST00000320516 MST1RQ04912 1400 aa14.6□□□□□ -0.07
CCDC65-202ENST00000320516 TECPR2O15040 1411 aa14.6□□□□□ -0.07
CCDC65-202ENST00000320516 C14orf93Q9H972 538 aaKnown RBP14.59□□□□□ -0.07
CCDC65-202ENST00000320516 LRPPRCP42704 1394 aaKnown RBP14.59□□□□□ -0.07
CCDC65-202ENST00000320516 ILDR2Q71H61 639 aa14.58□□□□□ -0.08
CCDC65-202ENST00000320516 TMEM132EQ6IEE7 984 aa14.57□□□□□ -0.08
CCDC65-202ENST00000320516 BRINP3Q76B58 766 aa14.57□□□□□ -0.08
CCDC65-202ENST00000320516 ABCC11Q96J66 1382 aa14.57□□□□□ -0.08
CCDC65-202ENST00000320516 COL16A1Q07092 1604 aaPredicted RBP14.57□□□□□ -0.08
CCDC65-202ENST00000320516 AHDC1Q5TGY3 1603 aaPredicted RBP14.57□□□□□ -0.08
CCDC65-202ENST00000320516 PHLPP1O60346 1717 aa14.57□□□□□ -0.08
CCDC65-202ENST00000320516 KNDC1Q76NI1 1749 aa14.56□□□□□ -0.08
CCDC65-202ENST00000320516 CFAP70Q5T0N1 1121 aa14.55□□□□□ -0.08
CCDC65-202ENST00000320516 YTHDC2Q9H6S0 1430 aaKnown RBP14.55□□□□□ -0.08
CCDC65-202ENST00000320516 DHX57Q6P158 1386 aaKnown RBP14.55□□□□□ -0.08
CCDC65-202ENST00000320516 LAMC1P11047 1609 aa14.55□□□□□ -0.08
CCDC65-202ENST00000320516 STK26Q9P289 416 aa14.55□□□□□ -0.08
CCDC65-202ENST00000320516 C1orf167Q5SNV9 1468 aa14.54□□□□□ -0.08
CCDC65-202ENST00000320516 WAPLQ7Z5K2 1190 aa14.53□□□□□ -0.08
CCDC65-202ENST00000320516 JCADQ9P266 1359 aa14.53□□□□□ -0.08
CCDC65-202ENST00000320516 PLEKHH1Q9ULM0 1364 aa14.53□□□□□ -0.08
CCDC65-202ENST00000320516 DCAF11Q8TEB1 546 aa14.52□□□□□ -0.08
CCDC65-202ENST00000320516 SIRT1Q96EB6 747 aa14.52□□□□□ -0.08
CCDC65-202ENST00000320516 STAC3Q96MF2 364 aa14.52□□□□□ -0.08
CCDC65-202ENST00000320516 NHSL1Q5SYE7 1610 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms