RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 CTTNBP2Q8WZ74 1663 aa5.56□□□□□ -1.52
CNOT1-201ENST00000317147 EIF2AK4Q9P2K8 1649 aaKnown RBP5.55□□□□□ -1.52
CNOT1-201ENST00000317147 NFKBIBQ15653 356 aa5.55□□□□□ -1.52
CNOT1-201ENST00000317147 SLC4A3P48751 1232 aa5.55□□□□□ -1.52
CNOT1-201ENST00000317147 REC8O95072 547 aa5.55□□□□□ -1.52
CNOT1-201ENST00000317147 GOLGA2Q08379 1002 aa5.55□□□□□ -1.52
CNOT1-201ENST00000317147 CTR9Q6PD62 1173 aa5.55□□□□□ -1.52
CNOT1-201ENST00000317147 DYNC1I1O14576 645 aa5.55□□□□□ -1.52
CNOT1-201ENST00000317147 FAM107BQ9H098 131 aa5.55□□□□□ -1.52
CNOT1-201ENST00000317147 CCDC7Q96M83 1385 aa5.55□□□□□ -1.52
CNOT1-201ENST00000317147 BRPF3Q9ULD4 1205 aa5.54□□□□□ -1.52
CNOT1-201ENST00000317147 GCC2Q8IWJ2 1684 aa5.54□□□□□ -1.52
CNOT1-201ENST00000317147 KANK1Q14678 1352 aa5.54□□□□□ -1.52
CNOT1-201ENST00000317147 CAVIN2O95810 425 aa5.54□□□□□ -1.52
CNOT1-201ENST00000317147 TUBB4AP04350 444 aa5.54□□□□□ -1.52
CNOT1-201ENST00000317147 SPRYD3Q8NCJ5 442 aa5.54□□□□□ -1.52
CNOT1-201ENST00000317147 CITO14578 2027 aa5.54□□□□□ -1.52
CNOT1-201ENST00000317147 NASPP49321 788 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-201ENST00000317147 USP47Q96K76 1375 aa5.54□□□□□ -1.52
CNOT1-201ENST00000317147 PLEKHH1Q9ULM0 1364 aa5.54□□□□□ -1.52
CNOT1-201ENST00000317147 HMMRO75330 724 aa5.53□□□□□ -1.52
CNOT1-201ENST00000317147 CLCN1P35523 988 aa5.53□□□□□ -1.52
CNOT1-201ENST00000317147 BACH2Q9BYV9 841 aa5.53□□□□□ -1.52
CNOT1-201ENST00000317147 TPM1P09493 284 aa5.53□□□□□ -1.52
CNOT1-201ENST00000317147 ZSCAN30Q86W11 494 aa5.53□□□□□ -1.52
CNOT1-201ENST00000317147 CENPJQ9HC77 1338 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-201ENST00000317147 CAMSAP2Q08AD1 1489 aa5.53□□□□□ -1.52
CNOT1-201ENST00000317147 KIF20AO95235 890 aa5.53□□□□□ -1.52
CNOT1-201ENST00000317147 CCDC70Q6NSX1 233 aa5.53□□□□□ -1.52
CNOT1-201ENST00000317147 ESPNB1AK53 854 aa5.53□□□□□ -1.52
CNOT1-201ENST00000317147 PDE3AQ14432 1141 aa5.52□□□□□ -1.53
CNOT1-201ENST00000317147 PRIMPOLQ96LW4 560 aa5.52□□□□□ -1.53
CNOT1-201ENST00000317147 CWC22Q9HCG8 908 aaKnown RBP5.52□□□□□ -1.53
CNOT1-201ENST00000317147 ARAP1Q96P48 1450 aa5.52□□□□□ -1.53
CNOT1-201ENST00000317147 PLIN1O60240 522 aa5.52□□□□□ -1.53
CNOT1-201ENST00000317147 TUBB4BP68371 445 aa5.52□□□□□ -1.53
CNOT1-201ENST00000317147 LMOD3Q0VAK6 560 aa5.52□□□□□ -1.53
CNOT1-201ENST00000317147 ABCA5Q8WWZ7 1642 aa5.52□□□□□ -1.53
CNOT1-201ENST00000317147 CALCOCO1Q9P1Z2 691 aa5.52□□□□□ -1.53
CNOT1-201ENST00000317147 ZNF428Q96B54 188 aa5.52□□□□□ -1.53
CNOT1-201ENST00000317147 GTPBP4Q9BZE4 634 aaKnown RBP5.52□□□□□ -1.53
CNOT1-201ENST00000317147 ARHGEF12Q9NZN5 1544 aa5.52□□□□□ -1.53
CNOT1-201ENST00000317147 ERCC4Q92889 916 aaPredicted RBP5.52□□□□□ -1.53
CNOT1-201ENST00000317147 CCDC184Q52MB2 194 aa5.51□□□□□ -1.53
CNOT1-201ENST00000317147 L3MBTL2Q969R5 705 aa5.51□□□□□ -1.53
CNOT1-201ENST00000317147 ZNF771Q7L3S4 317 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-201ENST00000317147 FGD5Q6ZNL6 1462 aa5.51□□□□□ -1.53
CNOT1-201ENST00000317147 PES1O00541 588 aaKnown RBP5.51□□□□□ -1.53
CNOT1-201ENST00000317147 RGL3Q3MIN7 710 aa5.51□□□□□ -1.53
CNOT1-201ENST00000317147 CC2D1BQ5T0F9 858 aaKnown RBP5.51□□□□□ -1.53
CNOT1-201ENST00000317147 DDX19BQ9UMR2 479 aa5.51□□□□□ -1.53
CNOT1-201ENST00000317147 DRC7Q8IY82 874 aa5.51□□□□□ -1.53
CNOT1-201ENST00000317147 AK7Q96M32 723 aa5.51□□□□□ -1.53
CNOT1-201ENST00000317147 MAP1BP46821 2468 aaKnown RBP5.5□□□□□ -1.53
CNOT1-201ENST00000317147 CENPFP49454 3210 aa5.5□□□□□ -1.53
CNOT1-201ENST00000317147 ARID3AQ99856 593 aa5.5□□□□□ -1.53
CNOT1-201ENST00000317147 AXDND1Q5T1B0 1012 aaPredicted RBP5.5□□□□□ -1.53
CNOT1-201ENST00000317147 STK11IPQ8N1F8 1099 aa5.5□□□□□ -1.53
CNOT1-201ENST00000317147 PTPN23Q9H3S7 1636 aa5.5□□□□□ -1.53
CNOT1-201ENST00000317147 NAT10Q9H0A0 1025 aaKnown RBP5.5□□□□□ -1.53
CNOT1-201ENST00000317147 ADGBQ8N7X0 1667 aa5.5□□□□□ -1.53
CNOT1-201ENST00000317147 NCOA2Q15596 1464 aa5.5□□□□□ -1.53
CNOT1-201ENST00000317147 CARMIL2Q6F5E8 1435 aa5.5□□□□□ -1.53
CNOT1-201ENST00000317147 CFDP1Q9UEE9 299 aaPredicted RBP5.5□□□□□ -1.53
CNOT1-201ENST00000317147 DDX49Q9Y6V7 483 aaKnown RBP5.5□□□□□ -1.53
CNOT1-201ENST00000317147 KIF14Q15058 1648 aa5.49□□□□□ -1.53
CNOT1-201ENST00000317147 RABEP1Q15276 862 aa5.49□□□□□ -1.53
CNOT1-201ENST00000317147 WWC1Q8IX03 1113 aa5.49□□□□□ -1.53
CNOT1-201ENST00000317147 CCDC141Q6ZP82 1450 aa5.49□□□□□ -1.53
CNOT1-201ENST00000317147 CDR1P51861 262 aa5.49□□□□□ -1.53
CNOT1-201ENST00000317147 KIAA1211Q6ZU35 1233 aa5.49□□□□□ -1.53
CNOT1-201ENST00000317147 GPATCH3Q96I76 525 aa5.49□□□□□ -1.53
CNOT1-201ENST00000317147 DNAJC2Q99543 621 aaKnown RBP5.49□□□□□ -1.53
CNOT1-201ENST00000317147 MYH1P12882 1939 aa5.49□□□□□ -1.53
CNOT1-201ENST00000317147 MYH2Q9UKX2 1941 aa5.49□□□□□ -1.53
CNOT1-201ENST00000317147 MYH4Q9Y623 1939 aa5.49□□□□□ -1.53
CNOT1-201ENST00000317147 URB1O60287 2271 aaKnown RBP5.49□□□□□ -1.53
CNOT1-201ENST00000317147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.49□□□□□ -1.536e-7■■■■□ 20.8
CNOT1-201ENST00000317147 HSP90B2PQ58FF3 399 aa5.49□□□□□ -1.53
CNOT1-201ENST00000317147 FRAT1Q92837 279 aaPredicted RBP5.49□□□□□ -1.53
CNOT1-201ENST00000317147 EXOC6Q8TAG9 804 aa5.48□□□□□ -1.53
CNOT1-201ENST00000317147 MPHOSPH9Q99550 1183 aa5.48□□□□□ -1.53
CNOT1-201ENST00000317147 NEMFO60524 1076 aa5.48□□□□□ -1.53
CNOT1-201ENST00000317147 PDCP20941 246 aa5.48□□□□□ -1.53
CNOT1-201ENST00000317147 SMAP1Q8IYB5 467 aaPredicted RBP5.48□□□□□ -1.53
CNOT1-201ENST00000317147 LAMC3Q9Y6N6 1575 aa5.48□□□□□ -1.53
CNOT1-201ENST00000317147 NCOA1Q15788 1441 aa5.48□□□□□ -1.53
CNOT1-201ENST00000317147 DAPK1P53355 1430 aa5.48□□□□□ -1.53
CNOT1-201ENST00000317147 NUP214P35658 2090 aaPredicted RBP5.48□□□□□ -1.53
CNOT1-201ENST00000317147 NESP48681 1621 aa5.48□□□□□ -1.53
CNOT1-201ENST00000317147 FBLN2P98095 1184 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 NEUROD2Q15784 382 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 RBM25P49756 843 aaKnown RBP5.47□□□□□ -1.53
CNOT1-201ENST00000317147 DCAF11Q8TEB1 546 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 GRPEL1Q9HAV7 217 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 MAPKBP1O60336 1514 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 MAP2P11137 1827 aaKnown RBP5.47□□□□□ -1.53
CNOT1-201ENST00000317147 APPP05067 770 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 SASS6Q6UVJ0 657 aa5.47□□□□□ -1.53
CNOT1-201ENST00000317147 FAM13BQ9NYF5 915 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms