RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
SPAST-201ENST00000315285 PANK1Q8TE04 598 aa17.04■□□□□ 0.32
SPAST-201ENST00000315285 API5Q9BZZ5 524 aaKnown RBP17.04■□□□□ 0.32
SPAST-201ENST00000315285 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.03■□□□□ 0.32
SPAST-201ENST00000315285 TULP1O00294 542 aaPredicted RBP17.03■□□□□ 0.32
SPAST-201ENST00000315285 HSP90B1P14625 803 aaKnown RBP17.03■□□□□ 0.32
SPAST-201ENST00000315285 HMGXB3Q12766 1538 aa17.03■□□□□ 0.32
SPAST-201ENST00000315285 KIF16BQ96L93 1317 aa17.03■□□□□ 0.32
SPAST-201ENST00000315285 TOPBP1Q92547 1522 aa17.02■□□□□ 0.32
SPAST-201ENST00000315285 PPP2R1AP30153 589 aa17.02■□□□□ 0.32
SPAST-201ENST00000315285 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
SPAST-201ENST00000315285 AAMPQ13685 434 aa17.02■□□□□ 0.32
SPAST-201ENST00000315285 SKOR2Q2VWA4 1001 aaPredicted RBP17.02■□□□□ 0.32
SPAST-201ENST00000315285 NESP48681 1621 aa17.02■□□□□ 0.31
SPAST-201ENST00000315285 PHF14O94880 888 aa17.01■□□□□ 0.31
SPAST-201ENST00000315285 ARHGAP5Q13017 1502 aa17.01■□□□□ 0.31
SPAST-201ENST00000315285 PNISRQ8TF01 805 aaKnown RBP17.01■□□□□ 0.31
SPAST-201ENST00000315285 C9orf84Q5VXU9 1444 aa17■□□□□ 0.31
SPAST-201ENST00000315285 CFAP70Q5T0N1 1121 aa17■□□□□ 0.31
SPAST-201ENST00000315285 AKNAQ7Z591 1439 aa17■□□□□ 0.31
SPAST-201ENST00000315285 AFAP1Q8N556 730 aa17■□□□□ 0.31
SPAST-201ENST00000315285 SYNJ2O15056 1496 aa17■□□□□ 0.31
SPAST-201ENST00000315285 GGNBP2Q9H3C7 697 aa17■□□□□ 0.31
SPAST-201ENST00000315285 CHMP5Q9NZZ3 219 aa17■□□□□ 0.31
SPAST-201ENST00000315285 REC8O95072 547 aa16.99■□□□□ 0.31
SPAST-201ENST00000315285 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
SPAST-201ENST00000315285 TMEM132EQ6IEE7 984 aa16.99■□□□□ 0.31
SPAST-201ENST00000315285 TAF7LQ5H9L4 462 aa16.99■□□□□ 0.31
SPAST-201ENST00000315285 TROQ12816 1431 aaPredicted RBP16.99■□□□□ 0.31
SPAST-201ENST00000315285 MTHFSP49914 203 aa16.98■□□□□ 0.31
SPAST-201ENST00000315285 PRG4Q92954 1404 aaPredicted RBP16.98■□□□□ 0.31
SPAST-201ENST00000315285 NAIPQ13075 1403 aa16.98■□□□□ 0.31
SPAST-201ENST00000315285 TCP11L2Q8N4U5 519 aa16.98■□□□□ 0.31
SPAST-201ENST00000315285 GNAI1P63096 354 aa16.98■□□□□ 0.31
SPAST-201ENST00000315285 LNPKQ9C0E8 428 aa16.98■□□□□ 0.31
SPAST-201ENST00000315285 CABP2Q9NPB3 220 aa16.97■□□□□ 0.31
SPAST-201ENST00000315285 DAPK1P53355 1430 aa16.97■□□□□ 0.31
SPAST-201ENST00000315285 HECW1Q76N89 1606 aa16.96■□□□□ 0.31
SPAST-201ENST00000315285 ROCK1Q13464 1354 aa16.96■□□□□ 0.31
SPAST-201ENST00000315285 TEFQ10587 303 aa16.96■□□□□ 0.31
SPAST-201ENST00000315285 ARID3AQ99856 593 aa16.96■□□□□ 0.31
SPAST-201ENST00000315285 C22orf23Q9BZE7 217 aa16.96■□□□□ 0.31
SPAST-201ENST00000315285 HMOX1P09601 288 aa16.95■□□□□ 0.3
SPAST-201ENST00000315285 NFKBIBQ15653 356 aa16.95■□□□□ 0.3
SPAST-201ENST00000315285 SUPT6HQ7KZ85 1726 aaKnown RBP16.95■□□□□ 0.3
SPAST-201ENST00000315285 TPM4P67936 248 aa16.94■□□□□ 0.3
SPAST-201ENST00000315285 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
SPAST-201ENST00000315285 KIF3AQ9Y496 699 aa16.94■□□□□ 0.3
SPAST-201ENST00000315285 ATP6V1DQ9Y5K8 247 aa16.94■□□□□ 0.3
SPAST-201ENST00000315285 FOXD4L6Q3SYB3 417 aaPredicted RBP16.93■□□□□ 0.3
SPAST-201ENST00000315285 C1orf141Q5JVX7 400 aa16.93■□□□□ 0.3
SPAST-201ENST00000315285 FOXD4L3Q6VB84 417 aaPredicted RBP16.93■□□□□ 0.3
SPAST-201ENST00000315285 OSCARQ8IYS5 282 aa16.93■□□□□ 0.3
SPAST-201ENST00000315285 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
SPAST-201ENST00000315285 DIAPH3Q9NSV4 1193 aa16.93■□□□□ 0.3
SPAST-201ENST00000315285 EIF2S2P20042 333 aaKnown RBP16.92■□□□□ 0.3
SPAST-201ENST00000315285 FKBP5Q13451 457 aaPredicted RBP16.91■□□□□ 0.3
SPAST-201ENST00000315285 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
SPAST-201ENST00000315285 RSPH6AQ9H0K4 717 aa16.91■□□□□ 0.3
SPAST-201ENST00000315285 ISY1Q9ULR0 285 aaKnown RBP16.91■□□□□ 0.3
SPAST-201ENST00000315285 PDE3AQ14432 1141 aa16.9■□□□□ 0.3
SPAST-201ENST00000315285 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
SPAST-201ENST00000315285 INTS3Q68E01 1043 aaKnown RBP16.9■□□□□ 0.3
SPAST-201ENST00000315285 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.9■□□□□ 0.3
SPAST-201ENST00000315285 C9orf78Q9NZ63 289 aaPredicted RBP16.9■□□□□ 0.3
SPAST-201ENST00000315285 PCF11O94913 1555 aaKnown RBP16.89■□□□□ 0.3
SPAST-201ENST00000315285 CCDC34Q96HJ3 373 aa16.89■□□□□ 0.3
SPAST-201ENST00000315285 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.3
SPAST-201ENST00000315285 RUFY2Q8WXA3 655 aa16.89■□□□□ 0.29
SPAST-201ENST00000315285 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
SPAST-201ENST00000315285 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
SPAST-201ENST00000315285 ANO2Q9NQ90 1003 aa16.89■□□□□ 0.29
SPAST-201ENST00000315285 SCAPERQ9BY12 1400 aa16.89■□□□□ 0.29
SPAST-201ENST00000315285 SF3A1Q15459 793 aaKnown RBP16.88■□□□□ 0.29
SPAST-201ENST00000315285 H3BQV1 296 aa16.88■□□□□ 0.29
SPAST-201ENST00000315285 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
SPAST-201ENST00000315285 TSPYL4Q9UJ04 414 aa16.88■□□□□ 0.29
SPAST-201ENST00000315285 NEXNQ0ZGT2 675 aa16.87■□□□□ 0.29
SPAST-201ENST00000315285 ERBINQ96RT1 1412 aa16.87■□□□□ 0.29
SPAST-201ENST00000315285 BCAR3O75815 825 aa16.87■□□□□ 0.29
SPAST-201ENST00000315285 CDK13Q14004 1512 aaKnown RBP16.87■□□□□ 0.29
SPAST-201ENST00000315285 PLEKHH2Q8IVE3 1493 aa16.87■□□□□ 0.29
SPAST-201ENST00000315285 ZKSCAN1P17029 563 aaPredicted RBP16.87■□□□□ 0.29
SPAST-201ENST00000315285 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
SPAST-201ENST00000315285 BACH2Q9BYV9 841 aa16.87■□□□□ 0.29
SPAST-201ENST00000315285 SLC12A5Q9H2X9 1139 aa16.87■□□□□ 0.29
SPAST-201ENST00000315285 FAM184AQ8NB25 1140 aa16.86■□□□□ 0.29
SPAST-201ENST00000315285 CCDC9Q9Y3X0 531 aaKnown RBP16.86■□□□□ 0.29
SPAST-201ENST00000315285 NUCB2P80303 420 aa16.86■□□□□ 0.29
SPAST-201ENST00000315285 PDZRN3Q9UPQ7 1066 aa16.86■□□□□ 0.29
SPAST-201ENST00000315285 MAP3K1Q13233 1512 aa16.85■□□□□ 0.29
SPAST-201ENST00000315285 ABCA10Q8WWZ4 1543 aa16.85■□□□□ 0.29
SPAST-201ENST00000315285 CDC45O75419 566 aa16.85■□□□□ 0.29
SPAST-201ENST00000315285 CC2D2AQ9P2K1 1620 aa16.85■□□□□ 0.29
SPAST-201ENST00000315285 IFIT2P09913 472 aaKnown RBP16.84■□□□□ 0.29
SPAST-201ENST00000315285 TOMM22Q9NS69 142 aa16.84■□□□□ 0.29
SPAST-201ENST00000315285 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
SPAST-201ENST00000315285 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
SPAST-201ENST00000315285 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
SPAST-201ENST00000315285 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms