RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 PLIN1O60240 522 aa14.74□□□□□ -0.05
AMBRA1-201ENST00000314845 SYNJ2O15056 1496 aa14.74□□□□□ -0.05
AMBRA1-201ENST00000314845 DZIP1LQ8IYY4 767 aaKnown RBP14.74□□□□□ -0.05
AMBRA1-201ENST00000314845 CPLX2Q6PUV4 134 aaKnown RBP14.74□□□□□ -0.05
AMBRA1-201ENST00000314845 NCOA2Q15596 1464 aa14.73□□□□□ -0.05
AMBRA1-201ENST00000314845 PHF14O94880 888 aa14.73□□□□□ -0.05
AMBRA1-201ENST00000314845 MARCH6O60337 910 aa14.73□□□□□ -0.05
AMBRA1-201ENST00000314845 FKBP5Q13451 457 aaPredicted RBP14.73□□□□□ -0.05
AMBRA1-201ENST00000314845 ATP6V1DQ9Y5K8 247 aa14.73□□□□□ -0.05
AMBRA1-201ENST00000314845 GOLGA6L3A6NEY3 463 aa14.72□□□□□ -0.05
AMBRA1-201ENST00000314845 EXOC6Q8TAG9 804 aa14.72□□□□□ -0.05
AMBRA1-201ENST00000314845 CRBNQ96SW2 442 aa14.72□□□□□ -0.05
AMBRA1-201ENST00000314845 CCDC7Q96M83 1385 aa14.72□□□□□ -0.05
AMBRA1-201ENST00000314845 REC8O95072 547 aa14.72□□□□□ -0.05
AMBRA1-201ENST00000314845 AKAP17AQ02040 695 aaKnown RBP14.72□□□□□ -0.05
AMBRA1-201ENST00000314845 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
AMBRA1-201ENST00000314845 KIF7Q2M1P5 1343 aa14.72□□□□□ -0.05
AMBRA1-201ENST00000314845 MSH5O43196 834 aa14.71□□□□□ -0.05
AMBRA1-201ENST00000314845 SYTL4Q96C24 671 aaPredicted RBP14.71□□□□□ -0.05
AMBRA1-201ENST00000314845 FAM184AQ8NB25 1140 aa14.71□□□□□ -0.05
AMBRA1-201ENST00000314845 SYNE3Q6ZMZ3 975 aa14.71□□□□□ -0.05
AMBRA1-201ENST00000314845 NOL10Q9BSC4 688 aaKnown RBP14.71□□□□□ -0.05
AMBRA1-201ENST00000314845 KIF21BO75037 1637 aa14.71□□□□□ -0.05
AMBRA1-201ENST00000314845 H3BQV1 296 aa14.71□□□□□ -0.06
AMBRA1-201ENST00000314845 IFIT2P09913 472 aaKnown RBP14.71□□□□□ -0.06
AMBRA1-201ENST00000314845 ZKSCAN1P17029 563 aaPredicted RBP14.71□□□□□ -0.06
AMBRA1-201ENST00000314845 IFFO2Q5TF58 517 aa14.71□□□□□ -0.06
AMBRA1-201ENST00000314845 GGNBP2Q9H3C7 697 aa14.71□□□□□ -0.06
AMBRA1-201ENST00000314845 TSPYL4Q9UJ04 414 aa14.7□□□□□ -0.06
AMBRA1-201ENST00000314845 PRG4Q92954 1404 aaPredicted RBP14.7□□□□□ -0.06
AMBRA1-201ENST00000314845 RRBP1Q9P2E9 1410 aaKnown RBP14.7□□□□□ -0.06
AMBRA1-201ENST00000314845 ARHGAP5Q13017 1502 aa14.7□□□□□ -0.06
AMBRA1-201ENST00000314845 NLRP6P59044 892 aa14.7□□□□□ -0.06
AMBRA1-201ENST00000314845 HSP90AB4PQ58FF6 505 aa14.7□□□□□ -0.06
AMBRA1-201ENST00000314845 AMOTL1Q8IY63 956 aa14.7□□□□□ -0.06
AMBRA1-201ENST00000314845 TSHZ2Q9NRE2 1034 aa14.69□□□□□ -0.06
AMBRA1-201ENST00000314845 PDE4AP27815 886 aa14.69□□□□□ -0.06
AMBRA1-201ENST00000314845 G3BP1Q13283 466 aaKnown RBP eCLIP14.69□□□□□ -0.062e-6■□□□□ 9.5
AMBRA1-201ENST00000314845 TMEM132EQ6IEE7 984 aa14.69□□□□□ -0.06
AMBRA1-201ENST00000314845 NLRP2Q9NX02 1062 aa14.69□□□□□ -0.06
AMBRA1-201ENST00000314845 CFTRP13569 1480 aa14.69□□□□□ -0.06
AMBRA1-201ENST00000314845 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
AMBRA1-201ENST00000314845 DDX11L8A8MPP1 907 aa14.68□□□□□ -0.06
AMBRA1-201ENST00000314845 NECTIN2Q92692 538 aa14.68□□□□□ -0.06
AMBRA1-201ENST00000314845 CABP2Q9NPB3 220 aa14.68□□□□□ -0.06
AMBRA1-201ENST00000314845 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
AMBRA1-201ENST00000314845 AAMPQ13685 434 aa14.68□□□□□ -0.06
AMBRA1-201ENST00000314845 TXNDC2Q86VQ3 553 aa14.67□□□□□ -0.06
AMBRA1-201ENST00000314845 HMOX1P09601 288 aa14.67□□□□□ -0.06
AMBRA1-201ENST00000314845 HFM1A2PYH4 1435 aa14.67□□□□□ -0.06
AMBRA1-201ENST00000314845 CFAP70Q5T0N1 1121 aa14.67□□□□□ -0.06
AMBRA1-201ENST00000314845 MEX3CQ5U5Q3 659 aaKnown RBP14.67□□□□□ -0.06
AMBRA1-201ENST00000314845 VPS53Q5VIR6 699 aa14.67□□□□□ -0.06
AMBRA1-201ENST00000314845 GPRASP1Q5JY77 1395 aa14.66□□□□□ -0.06
AMBRA1-201ENST00000314845 ERICH3Q5RHP9 1530 aa14.65□□□□□ -0.06
AMBRA1-201ENST00000314845 VPS37DQ86XT2 251 aa14.65□□□□□ -0.06
AMBRA1-201ENST00000314845 RNF20Q5VTR2 975 aa14.65□□□□□ -0.06
AMBRA1-201ENST00000314845 PLEKHH2Q8IVE3 1493 aa14.65□□□□□ -0.06
AMBRA1-201ENST00000314845 IFT140Q96RY7 1462 aa14.65□□□□□ -0.06
AMBRA1-201ENST00000314845 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
AMBRA1-201ENST00000314845 TRDNQ13061 729 aa14.64□□□□□ -0.07
AMBRA1-201ENST00000314845 MTHFSP49914 203 aa14.64□□□□□ -0.07
AMBRA1-201ENST00000314845 FOXD4L5Q5VV16 416 aaPredicted RBP14.64□□□□□ -0.07
AMBRA1-201ENST00000314845 FOXD4L4Q8WXT5 416 aaPredicted RBP14.64□□□□□ -0.07
AMBRA1-201ENST00000314845 CNTLNQ9NXG0 1405 aa14.63□□□□□ -0.07
AMBRA1-201ENST00000314845 CREBRFQ8IUR6 639 aa14.63□□□□□ -0.07
AMBRA1-201ENST00000314845 NOC3LQ8WTT2 800 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-201ENST00000314845 SLC52A1Q9NWF4 448 aa14.63□□□□□ -0.07
AMBRA1-201ENST00000314845 APPP05067 770 aa14.63□□□□□ -0.07
AMBRA1-201ENST00000314845 AEBP2Q6ZN18 517 aaPredicted RBP14.63□□□□□ -0.07
AMBRA1-201ENST00000314845 THEMISQ8N1K5 641 aaPredicted RBP14.63□□□□□ -0.07
AMBRA1-201ENST00000314845 TRIM34Q9BYJ4 488 aa14.63□□□□□ -0.07
AMBRA1-201ENST00000314845 BRD4O60885 1362 aaPredicted RBP14.63□□□□□ -0.07
AMBRA1-201ENST00000314845 RIC3Q7Z5B4 369 aa14.63□□□□□ -0.07
AMBRA1-201ENST00000314845 ERC2O15083 957 aa14.62□□□□□ -0.07
AMBRA1-201ENST00000314845 GAS2L2Q8NHY3 880 aa14.62□□□□□ -0.07
AMBRA1-201ENST00000314845 CPLX1O14810 134 aa14.62□□□□□ -0.07
AMBRA1-201ENST00000314845 TPM3P06753 285 aa14.62□□□□□ -0.07
AMBRA1-201ENST00000314845 DDX49Q9Y6V7 483 aaKnown RBP14.62□□□□□ -0.07
AMBRA1-201ENST00000314845 TRIM29Q14134 588 aa14.62□□□□□ -0.07
AMBRA1-201ENST00000314845 USP35Q9P2H5 1018 aa14.62□□□□□ -0.07
AMBRA1-201ENST00000314845 SKOR2Q2VWA4 1001 aaPredicted RBP14.61□□□□□ -0.07
AMBRA1-201ENST00000314845 PROSER2Q86WR7 435 aaPredicted RBP14.61□□□□□ -0.07
AMBRA1-201ENST00000314845 WASHC2AQ641Q2 1341 aa14.61□□□□□ -0.07
AMBRA1-201ENST00000314845 ABTB2Q8N961 1025 aa14.61□□□□□ -0.07
AMBRA1-201ENST00000314845 NUTM2GQ5VZR2 741 aa14.61□□□□□ -0.07
AMBRA1-201ENST00000314845 CEP89Q96ST8 783 aa14.61□□□□□ -0.07
AMBRA1-201ENST00000314845 ANO2Q9NQ90 1003 aa14.61□□□□□ -0.07
AMBRA1-201ENST00000314845 MCTP1Q6DN14 999 aa14.6□□□□□ -0.07
AMBRA1-201ENST00000314845 TPD52L1Q16890 204 aaPredicted RBP14.6□□□□□ -0.07
AMBRA1-201ENST00000314845 EFCAB5A4FU69 1503 aa14.6□□□□□ -0.07
AMBRA1-201ENST00000314845 TROQ12816 1431 aaPredicted RBP14.6□□□□□ -0.07
AMBRA1-201ENST00000314845 INTS3Q68E01 1043 aaKnown RBP14.59□□□□□ -0.07
AMBRA1-201ENST00000314845 ARAP1Q96P48 1450 aa14.59□□□□□ -0.07
AMBRA1-201ENST00000314845 BECN2A8MW95 431 aa14.59□□□□□ -0.07
AMBRA1-201ENST00000314845 TCP11L2Q8N4U5 519 aa14.59□□□□□ -0.07
AMBRA1-201ENST00000314845 C9orf84Q5VXU9 1444 aa14.59□□□□□ -0.07
AMBRA1-201ENST00000314845 GOLGA6L19H0YKK7 550 aa14.59□□□□□ -0.07
AMBRA1-201ENST00000314845 UBTFL1P0CB47 393 aaPredicted RBP14.59□□□□□ -0.07
AMBRA1-201ENST00000314845 PRAM1Q96QH2 718 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms