RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
CCDC13-201ENST00000310232 WDR7Q9Y4E6 1490 aa17.5■□□□□ 0.39
CCDC13-201ENST00000310232 SLFN5Q08AF3 891 aa17.5■□□□□ 0.39
CCDC13-201ENST00000310232 PANK1Q8TE04 598 aa17.5■□□□□ 0.39
CCDC13-201ENST00000310232 TNNQ9UQP3 1299 aa17.49■□□□□ 0.39
CCDC13-201ENST00000310232 POGKQ9P215 609 aa17.48■□□□□ 0.39
CCDC13-201ENST00000310232 COG6Q9Y2V7 657 aa17.48■□□□□ 0.39
CCDC13-201ENST00000310232 TNNT2P45379 298 aaPredicted RBP17.48■□□□□ 0.39
CCDC13-201ENST00000310232 RRP7AQ9Y3A4 280 aaKnown RBP17.47■□□□□ 0.39
CCDC13-201ENST00000310232 SYNJ2O15056 1496 aa17.46■□□□□ 0.39
CCDC13-201ENST00000310232 USP19O94966 1318 aa17.46■□□□□ 0.39
CCDC13-201ENST00000310232 SPRYD3Q8NCJ5 442 aa17.46■□□□□ 0.39
CCDC13-201ENST00000310232 BCL2L13Q9BXK5 485 aa17.46■□□□□ 0.39
CCDC13-201ENST00000310232 ARHGEF5Q12774 1597 aa17.43■□□□□ 0.38
CCDC13-201ENST00000310232 ARHGAP5Q13017 1502 aa17.43■□□□□ 0.38
CCDC13-201ENST00000310232 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.42■□□□□ 0.38
CCDC13-201ENST00000310232 CANXP27824 592 aaKnown RBP17.41■□□□□ 0.38
CCDC13-201ENST00000310232 TTC37Q6PGP7 1564 aa17.41■□□□□ 0.38
CCDC13-201ENST00000310232 CLUAP1Q96AJ1 413 aa17.4■□□□□ 0.38
CCDC13-201ENST00000310232 NUP160Q12769 1436 aa17.39■□□□□ 0.37
CCDC13-201ENST00000310232 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
CCDC13-201ENST00000310232 PREX2Q70Z35 1606 aa17.38■□□□□ 0.37
CCDC13-201ENST00000310232 TRMT2AQ8IZ69 625 aaKnown RBP17.38■□□□□ 0.37
CCDC13-201ENST00000310232 CARD14Q9BXL6 1004 aa17.37■□□□□ 0.37
CCDC13-201ENST00000310232 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
CCDC13-201ENST00000310232 RLBP1P12271 317 aa17.37■□□□□ 0.37
CCDC13-201ENST00000310232 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
CCDC13-201ENST00000310232 UNC13BO14795 1591 aa17.36■□□□□ 0.37
CCDC13-201ENST00000310232 CFAP70Q5T0N1 1121 aa17.35■□□□□ 0.37
CCDC13-201ENST00000310232 ASXL1Q8IXJ9 1541 aa17.34■□□□□ 0.37
CCDC13-201ENST00000310232 LAMC1P11047 1609 aa17.34■□□□□ 0.37
CCDC13-201ENST00000310232 INSRP06213 1382 aa17.34■□□□□ 0.37
CCDC13-201ENST00000310232 EIF2AK4Q9P2K8 1649 aaKnown RBP17.34■□□□□ 0.37
CCDC13-201ENST00000310232 PCDHB15Q9Y5E8 787 aa17.34■□□□□ 0.37
CCDC13-201ENST00000310232 IQGAP3Q86VI3 1631 aa17.33■□□□□ 0.37
CCDC13-201ENST00000310232 RNF17Q9BXT8 1623 aaKnown RBP17.33■□□□□ 0.37
CCDC13-201ENST00000310232 EIF3AQ14152 1382 aaKnown RBP17.33■□□□□ 0.36
CCDC13-201ENST00000310232 CENPJQ9HC77 1338 aaPredicted RBP17.33■□□□□ 0.36
CCDC13-201ENST00000310232 GZF1Q9H116 711 aaPredicted RBP17.33■□□□□ 0.36
CCDC13-201ENST00000310232 MYOM1P52179 1685 aa17.33■□□□□ 0.36
CCDC13-201ENST00000310232 AFAP1Q8N556 730 aa17.32■□□□□ 0.36
CCDC13-201ENST00000310232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCDC13-201ENST00000310232 WWC1Q8IX03 1113 aa17.32■□□□□ 0.36
CCDC13-201ENST00000310232 MADDQ8WXG6 1647 aa17.32■□□□□ 0.36
CCDC13-201ENST00000310232 E9PSI1 815 aa17.31■□□□□ 0.36
CCDC13-201ENST00000310232 IQGAP1P46940 1657 aa17.3■□□□□ 0.36
CCDC13-201ENST00000310232 RSPH4AQ5TD94 716 aa17.29■□□□□ 0.36
CCDC13-201ENST00000310232 RRAGDQ9NQL2 400 aaPredicted RBP17.29■□□□□ 0.36
CCDC13-201ENST00000310232 PIK3C2GO75747 1445 aa17.29■□□□□ 0.36
CCDC13-201ENST00000310232 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
CCDC13-201ENST00000310232 MAST1Q9Y2H9 1570 aa17.28■□□□□ 0.36
CCDC13-201ENST00000310232 NLRP1Q9C000 1473 aa17.28■□□□□ 0.36
CCDC13-201ENST00000310232 PDZRN3Q9UPQ7 1066 aa17.27■□□□□ 0.36
CCDC13-201ENST00000310232 TRAPPC8Q9Y2L5 1435 aa17.27■□□□□ 0.36
CCDC13-201ENST00000310232 ADGRF5Q8IZF2 1346 aa17.27■□□□□ 0.36
CCDC13-201ENST00000310232 SYNMO15061 1565 aa17.27■□□□□ 0.36
CCDC13-201ENST00000310232 UGGT1Q9NYU2 1555 aa17.27■□□□□ 0.36
CCDC13-201ENST00000310232 SCAF11Q99590 1463 aaKnown RBP17.27■□□□□ 0.35
CCDC13-201ENST00000310232 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.35
CCDC13-201ENST00000310232 PANK2Q9BZ23 570 aa17.25■□□□□ 0.35
CCDC13-201ENST00000310232 CGNL1Q0VF96 1302 aa17.25■□□□□ 0.35
CCDC13-201ENST00000310232 ERCC6L2Q5T890 1561 aa17.24■□□□□ 0.35
CCDC13-201ENST00000310232 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
CCDC13-201ENST00000310232 SLC12A5Q9H2X9 1139 aa17.24■□□□□ 0.35
CCDC13-201ENST00000310232 ATP10AO60312 1499 aa17.24■□□□□ 0.35
CCDC13-201ENST00000310232 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
CCDC13-201ENST00000310232 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
CCDC13-201ENST00000310232 ANTXR1Q9H6X2 564 aa17.24■□□□□ 0.35
CCDC13-201ENST00000310232 CLASP1Q7Z460 1538 aa17.23■□□□□ 0.35
CCDC13-201ENST00000310232 CLTCL1P53675 1640 aa17.23■□□□□ 0.35
CCDC13-201ENST00000310232 DUOX2Q9NRD8 1548 aa17.23■□□□□ 0.35
CCDC13-201ENST00000310232 PDE3AQ14432 1141 aa17.23■□□□□ 0.35
CCDC13-201ENST00000310232 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
CCDC13-201ENST00000310232 CEP152O94986 1710 aa17.22■□□□□ 0.35
CCDC13-201ENST00000310232 ABCC2Q92887 1545 aa17.22■□□□□ 0.35
CCDC13-201ENST00000310232 TRAK1Q9UPV9 953 aa17.22■□□□□ 0.35
CCDC13-201ENST00000310232 ERVK-7P63135 1459 aa17.22■□□□□ 0.35
CCDC13-201ENST00000310232 BECN1Q14457 450 aa17.21■□□□□ 0.35
CCDC13-201ENST00000310232 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.35
CCDC13-201ENST00000310232 CFAP65Q6ZU64 1925 aaKnown RBP17.21■□□□□ 0.35
CCDC13-201ENST00000310232 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
CCDC13-201ENST00000310232 PLXNC1O60486 1568 aa17.2■□□□□ 0.34
CCDC13-201ENST00000310232 MAPK8IP3Q9UPT6 1336 aa17.2■□□□□ 0.34
CCDC13-201ENST00000310232 SPHKAPQ2M3C7 1700 aa17.2■□□□□ 0.34
CCDC13-201ENST00000310232 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
CCDC13-201ENST00000310232 FAM43AQ8N2R8 423 aa17.2■□□□□ 0.34
CCDC13-201ENST00000310232 NUTM2DQ5VT03 806 aaPredicted RBP17.2■□□□□ 0.34
CCDC13-201ENST00000310232 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
CCDC13-201ENST00000310232 TMEM132EQ6IEE7 984 aa17.19■□□□□ 0.34
CCDC13-201ENST00000310232 TBC1D32Q96NH3 1257 aa17.19■□□□□ 0.34
CCDC13-201ENST00000310232 KIF3BO15066 747 aa17.19■□□□□ 0.34
CCDC13-201ENST00000310232 SPAG9O60271 1321 aaKnown RBP17.18■□□□□ 0.34
CCDC13-201ENST00000310232 MTHFSP49914 203 aa17.17■□□□□ 0.34
CCDC13-201ENST00000310232 XRCC6P12956 609 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCDC13-201ENST00000310232 NSD3Q9BZ95 1437 aa17.17■□□□□ 0.34
CCDC13-201ENST00000310232 EFCAB2Q5VUJ9 269 aa17.15■□□□□ 0.34
CCDC13-201ENST00000310232 SAFB2Q14151 953 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC13-201ENST00000310232 UPF2Q9HAU5 1272 aaKnown RBP17.14■□□□□ 0.33
CCDC13-201ENST00000310232 RUNDC1Q96C34 613 aa17.14■□□□□ 0.33
CCDC13-201ENST00000310232 TRPM2O94759 1503 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms