RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 PLEKHG1Q9ULL1 1385 aa25.31■■□□□ 1.64
TRAPPC1-201ENST00000303731 RIMS2Q9UQ26 1411 aa25.3■■□□□ 1.64
TRAPPC1-201ENST00000303731 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.3■■□□□ 1.64
TRAPPC1-201ENST00000303731 XIRP1Q702N8 1843 aaKnown RBP25.3■■□□□ 1.64
TRAPPC1-201ENST00000303731 HSPA1LP34931 641 aa25.29■■□□□ 1.64
TRAPPC1-201ENST00000303731 NKTRP30414 1462 aaKnown RBP25.28■■□□□ 1.64
TRAPPC1-201ENST00000303731 NWD1Q149M9 1564 aa25.28■■□□□ 1.64
TRAPPC1-201ENST00000303731 PPP1R15AO75807 674 aaPredicted RBP25.28■■□□□ 1.64
TRAPPC1-201ENST00000303731 BCANQ96GW7 911 aa25.28■■□□□ 1.64
TRAPPC1-201ENST00000303731 SLC26A8Q96RN1 970 aa25.28■■□□□ 1.64
TRAPPC1-201ENST00000303731 CHGAP10645 457 aaKnown RBP25.25■■□□□ 1.63
TRAPPC1-201ENST00000303731 SPHKAPQ2M3C7 1700 aa25.25■■□□□ 1.63
TRAPPC1-201ENST00000303731 NAIPQ13075 1403 aa25.23■■□□□ 1.63
TRAPPC1-201ENST00000303731 TMEM94Q12767 1356 aa25.22■■□□□ 1.63
TRAPPC1-201ENST00000303731 DIP2AQ14689 1571 aa25.22■■□□□ 1.63
TRAPPC1-201ENST00000303731 CHD2O14647 1828 aaKnown RBP25.21■■□□□ 1.63
TRAPPC1-201ENST00000303731 PROSER2Q86WR7 435 aaPredicted RBP25.2■■□□□ 1.62
TRAPPC1-201ENST00000303731 TBX22Q9Y458 520 aa25.2■■□□□ 1.62
TRAPPC1-201ENST00000303731 HFM1A2PYH4 1435 aa25.19■■□□□ 1.62
TRAPPC1-201ENST00000303731 PIK3R4Q99570 1358 aa25.17■■□□□ 1.62
TRAPPC1-201ENST00000303731 MED1Q15648 1581 aaPredicted RBP25.15■■□□□ 1.62
TRAPPC1-201ENST00000303731 FAM135BQ49AJ0 1406 aa25.15■■□□□ 1.62
TRAPPC1-201ENST00000303731 TRPM2O94759 1503 aa25.14■■□□□ 1.62
TRAPPC1-201ENST00000303731 ILDR2Q71H61 639 aa25.14■■□□□ 1.62
TRAPPC1-201ENST00000303731 ADAMTS13Q76LX8 1427 aa25.13■■□□□ 1.61
TRAPPC1-201ENST00000303731 NCOA3Q9Y6Q9 1424 aa25.13■■□□□ 1.61
TRAPPC1-201ENST00000303731 MSH6P52701 1360 aa25.13■■□□□ 1.61
TRAPPC1-201ENST00000303731 KIF1BO60333 1816 aa25.08■■□□□ 1.61
TRAPPC1-201ENST00000303731 NUTM2DQ5VT03 806 aaPredicted RBP25.08■■□□□ 1.61
TRAPPC1-201ENST00000303731 CLTCL1P53675 1640 aa25.08■■□□□ 1.6
TRAPPC1-201ENST00000303731 SETBP1Q9Y6X0 1596 aa25.07■■□□□ 1.6
TRAPPC1-201ENST00000303731 SOCS7O14512 581 aa25.07■■□□□ 1.6
TRAPPC1-201ENST00000303731 SENP3Q9H4L4 574 aaPredicted RBP25.07■■□□□ 1.6
TRAPPC1-201ENST00000303731 ZNF326Q5BKZ1 582 aaKnown RBP25.06■■□□□ 1.6
TRAPPC1-201ENST00000303731 TRIM52Q96A61 297 aa25.06■■□□□ 1.6
TRAPPC1-201ENST00000303731 ROBO1Q9Y6N7 1651 aa25.06■■□□□ 1.6
TRAPPC1-201ENST00000303731 RBM33Q96EV2 1170 aaKnown RBP25.04■■□□□ 1.6
TRAPPC1-201ENST00000303731 NRXN3Q9Y4C0 1643 aa25.02■■□□□ 1.6
TRAPPC1-201ENST00000303731 SLC4A1APQ9BWU0 796 aaKnown RBP25.01■■□□□ 1.59
TRAPPC1-201ENST00000303731 NEXMIFQ5QGS0 1516 aa25.01■■□□□ 1.59
TRAPPC1-201ENST00000303731 SLAIN2Q9P270 581 aa25■■□□□ 1.59
TRAPPC1-201ENST00000303731 C14orf37Q86TY3 774 aa24.99■■□□□ 1.59
TRAPPC1-201ENST00000303731 PHF23Q9BUL5 403 aaPredicted RBP24.99■■□□□ 1.59
TRAPPC1-201ENST00000303731 ACIN1Q9UKV3 1341 aaKnown RBP24.98■■□□□ 1.59
TRAPPC1-201ENST00000303731 AMOTL2Q9Y2J4 779 aa24.98■■□□□ 1.59
TRAPPC1-201ENST00000303731 CADPS2Q86UW7 1296 aa24.97■■□□□ 1.59
TRAPPC1-201ENST00000303731 C19orf44Q9H6X5 657 aa24.97■■□□□ 1.59
TRAPPC1-201ENST00000303731 XRN1Q8IZH2 1706 aaKnown RBP24.97■■□□□ 1.59
TRAPPC1-201ENST00000303731 PTPRUQ92729 1446 aa24.95■■□□□ 1.59
TRAPPC1-201ENST00000303731 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.95■■□□□ 1.59
TRAPPC1-201ENST00000303731 RPGRIP1LQ68CZ1 1315 aa24.94■■□□□ 1.58
TRAPPC1-201ENST00000303731 VGFO15240 615 aaPredicted RBP24.93■■□□□ 1.58
TRAPPC1-201ENST00000303731 ATF3P18847 181 aa24.93■■□□□ 1.58
TRAPPC1-201ENST00000303731 DCCP43146 1447 aa24.93■■□□□ 1.58
TRAPPC1-201ENST00000303731 PHLPP1O60346 1717 aa24.92■■□□□ 1.58
TRAPPC1-201ENST00000303731 METP08581 1390 aa24.9■■□□□ 1.58
TRAPPC1-201ENST00000303731 PPLO60437 1756 aa24.87■■□□□ 1.57
TRAPPC1-201ENST00000303731 CCDC144AA2RUR9 1427 aa24.86■■□□□ 1.57
TRAPPC1-201ENST00000303731 JCADQ9P266 1359 aa24.85■■□□□ 1.57
TRAPPC1-201ENST00000303731 AHDC1Q5TGY3 1603 aaPredicted RBP24.84■■□□□ 1.57
TRAPPC1-201ENST00000303731 COL16A1Q07092 1604 aaPredicted RBP24.83■■□□□ 1.57
TRAPPC1-201ENST00000303731 MPHOSPH9Q99550 1183 aa24.83■■□□□ 1.57
TRAPPC1-201ENST00000303731 SETD1AO15047 1707 aaKnown RBP24.83■■□□□ 1.57
TRAPPC1-201ENST00000303731 PTCH1Q13635 1447 aa24.82■■□□□ 1.56
TRAPPC1-201ENST00000303731 ADGRL3Q9HAR2 1447 aa24.82■■□□□ 1.56
TRAPPC1-201ENST00000303731 PRAG1Q86YV5 1406 aa24.81■■□□□ 1.56
TRAPPC1-201ENST00000303731 SETD5Q9C0A6 1442 aa24.8■■□□□ 1.56
TRAPPC1-201ENST00000303731 FOXD1Q16676 465 aa24.78■■□□□ 1.56
TRAPPC1-201ENST00000303731 NALCNQ8IZF0 1738 aa24.77■■□□□ 1.56
TRAPPC1-201ENST00000303731 MST1RQ04912 1400 aa24.77■■□□□ 1.56
TRAPPC1-201ENST00000303731 BRINP3Q76B58 766 aa24.76■■□□□ 1.55
TRAPPC1-201ENST00000303731 ANKRD30BQ9BXX2 1392 aa24.76■■□□□ 1.55
TRAPPC1-201ENST00000303731 SPATA31E1Q6ZUB1 1445 aa24.76■■□□□ 1.55
TRAPPC1-201ENST00000303731 SPATA31A6Q5VVP1 1343 aa24.75■■□□□ 1.55
TRAPPC1-201ENST00000303731 ASXL1Q8IXJ9 1541 aa24.74■■□□□ 1.55
TRAPPC1-201ENST00000303731 SHPRHQ149N8 1683 aa24.74■■□□□ 1.55
TRAPPC1-201ENST00000303731 IFT172Q9UG01 1749 aa24.74■■□□□ 1.55
TRAPPC1-201ENST00000303731 RGS17Q9UGC6 210 aaPredicted RBP24.73■■□□□ 1.55
TRAPPC1-201ENST00000303731 NHSL1Q5SYE7 1610 aa24.71■■□□□ 1.55
TRAPPC1-201ENST00000303731 ROBO2Q9HCK4 1378 aa24.7■■□□□ 1.55
TRAPPC1-201ENST00000303731 RGL3Q3MIN7 710 aa24.68■■□□□ 1.54
TRAPPC1-201ENST00000303731 RAB3GAP2Q9H2M9 1393 aa24.67■■□□□ 1.54
TRAPPC1-201ENST00000303731 ADGRF5Q8IZF2 1346 aa24.66■■□□□ 1.54
TRAPPC1-201ENST00000303731 C1orf167Q5SNV9 1468 aa24.64■■□□□ 1.54
TRAPPC1-201ENST00000303731 PIK3C2GO75747 1445 aa24.64■■□□□ 1.54
TRAPPC1-201ENST00000303731 TECPR2O15040 1411 aa24.63■■□□□ 1.53
TRAPPC1-201ENST00000303731 LRRC59Q96AG4 307 aaKnown RBP24.63■■□□□ 1.53
TRAPPC1-201ENST00000303731 LAMC1P11047 1609 aa24.62■■□□□ 1.53
TRAPPC1-201ENST00000303731 LRP6O75581 1613 aa24.61■■□□□ 1.53
TRAPPC1-201ENST00000303731 KNDC1Q76NI1 1749 aa24.61■■□□□ 1.53
TRAPPC1-201ENST00000303731 MEX3CQ5U5Q3 659 aaKnown RBP24.61■■□□□ 1.53
TRAPPC1-201ENST00000303731 LRPPRCP42704 1394 aaKnown RBP24.61■■□□□ 1.53
TRAPPC1-201ENST00000303731 CDC42BPGQ6DT37 1551 aa24.61■■□□□ 1.53
TRAPPC1-201ENST00000303731 POTEAQ6S8J7 498 aa24.6■■□□□ 1.53
TRAPPC1-201ENST00000303731 MYOM2P54296 1465 aa24.59■■□□□ 1.53
TRAPPC1-201ENST00000303731 ABCC11Q96J66 1382 aa24.59■■□□□ 1.53
TRAPPC1-201ENST00000303731 HRCP23327 699 aa24.59■■□□□ 1.53
TRAPPC1-201ENST00000303731 ZNF772Q68DY9 489 aaPredicted RBP24.57■■□□□ 1.52
TRAPPC1-201ENST00000303731 NRXN1Q9ULB1 1477 aa24.57■■□□□ 1.52
TRAPPC1-201ENST00000303731 YTHDC2Q9H6S0 1430 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms