RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 ZFYVE9O95405 1425 aa27.1■■□□□ 1.93
SPSB3-201ENST00000301717 ILDR1Q86SU0 546 aaPredicted RBP27.06■■□□□ 1.92
SPSB3-201ENST00000301717 SLC26A8Q96RN1 970 aa27.04■■□□□ 1.92
SPSB3-201ENST00000301717 PPP1R15AO75807 674 aaPredicted RBP27.03■■□□□ 1.92
SPSB3-201ENST00000301717 ZNF326Q5BKZ1 582 aaKnown RBP27.02■■□□□ 1.92
SPSB3-201ENST00000301717 BCANQ96GW7 911 aa27.02■■□□□ 1.92
SPSB3-201ENST00000301717 PLEKHG1Q9ULL1 1385 aa26.97■■□□□ 1.91
SPSB3-201ENST00000301717 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.96■■□□□ 1.91
SPSB3-201ENST00000301717 STRCP1A6NGW2 1772 aa26.95■■□□□ 1.91
SPSB3-201ENST00000301717 FBXO41Q8TF61 875 aa26.95■■□□□ 1.9
SPSB3-201ENST00000301717 CCDC144AA2RUR9 1427 aa26.95■■□□□ 1.9
SPSB3-201ENST00000301717 HDGFP51858 240 aaKnown RBP26.93■■□□□ 1.9
SPSB3-201ENST00000301717 ACIN1Q9UKV3 1341 aaKnown RBP26.93■■□□□ 1.9
SPSB3-201ENST00000301717 KIF1BO60333 1816 aa26.92■■□□□ 1.9
SPSB3-201ENST00000301717 HRCP23327 699 aa26.92■■□□□ 1.9
SPSB3-201ENST00000301717 NEXMIFQ5QGS0 1516 aa26.92■■□□□ 1.9
SPSB3-201ENST00000301717 CPS1P31327 1500 aa26.9■■□□□ 1.9
SPSB3-201ENST00000301717 ADAMTS13Q76LX8 1427 aa26.9■■□□□ 1.9
SPSB3-201ENST00000301717 RGL3Q3MIN7 710 aa26.89■■□□□ 1.89
SPSB3-201ENST00000301717 LRRC7Q96NW7 1537 aa26.86■■□□□ 1.89
SPSB3-201ENST00000301717 RBM33Q96EV2 1170 aaKnown RBP26.85■■□□□ 1.89
SPSB3-201ENST00000301717 SPATA31E1Q6ZUB1 1445 aa26.85■■□□□ 1.89
SPSB3-201ENST00000301717 ANKRD30BQ9BXX2 1392 aa26.85■■□□□ 1.89
SPSB3-201ENST00000301717 KCNA6P17658 529 aa26.83■■□□□ 1.89
SPSB3-201ENST00000301717 TRIM26Q12899 539 aaPredicted RBP26.83■■□□□ 1.89
SPSB3-201ENST00000301717 NRXN3Q9Y4C0 1643 aa26.83■■□□□ 1.89
SPSB3-201ENST00000301717 IQSEC2Q5JU85 1478 aa26.83■■□□□ 1.89
SPSB3-201ENST00000301717 TBX22Q9Y458 520 aa26.82■■□□□ 1.88
SPSB3-201ENST00000301717 UBAP1LF5GYI3 381 aa26.79■■□□□ 1.88
SPSB3-201ENST00000301717 SETBP1Q9Y6X0 1596 aa26.79■■□□□ 1.88
SPSB3-201ENST00000301717 NWD1Q149M9 1564 aa26.77■■□□□ 1.88
SPSB3-201ENST00000301717 PTPRUQ92729 1446 aa26.77■■□□□ 1.88
SPSB3-201ENST00000301717 RPGRIP1LQ68CZ1 1315 aa26.77■■□□□ 1.88
SPSB3-201ENST00000301717 ADGRF5Q8IZF2 1346 aa26.76■■□□□ 1.87
SPSB3-201ENST00000301717 METP08581 1390 aa26.76■■□□□ 1.87
SPSB3-201ENST00000301717 DIP2AQ14689 1571 aa26.76■■□□□ 1.87
SPSB3-201ENST00000301717 PPLO60437 1756 aa26.76■■□□□ 1.87
SPSB3-201ENST00000301717 VGFO15240 615 aaPredicted RBP26.75■■□□□ 1.87
SPSB3-201ENST00000301717 TMEM94Q12767 1356 aa26.75■■□□□ 1.87
SPSB3-201ENST00000301717 PROSER2Q86WR7 435 aaPredicted RBP26.74■■□□□ 1.87
SPSB3-201ENST00000301717 CHD2O14647 1828 aaKnown RBP26.72■■□□□ 1.87
SPSB3-201ENST00000301717 XIRP1Q702N8 1843 aaKnown RBP26.71■■□□□ 1.87
SPSB3-201ENST00000301717 AMOTL2Q9Y2J4 779 aa26.71■■□□□ 1.87
SPSB3-201ENST00000301717 NKTRP30414 1462 aaKnown RBP26.71■■□□□ 1.87
SPSB3-201ENST00000301717 ALKQ9UM73 1620 aa26.7■■□□□ 1.86
SPSB3-201ENST00000301717 PIP4K2BP78356 416 aa26.69■■□□□ 1.86
SPSB3-201ENST00000301717 IFT172Q9UG01 1749 aa26.68■■□□□ 1.86
SPSB3-201ENST00000301717 PIK3R4Q99570 1358 aa26.68■■□□□ 1.86
SPSB3-201ENST00000301717 SCAF1Q9H7N4 1312 aaKnown RBP26.67■■□□□ 1.86
SPSB3-201ENST00000301717 SETD1AO15047 1707 aaKnown RBP26.64■■□□□ 1.86
SPSB3-201ENST00000301717 TOM1O60784 492 aa26.64■■□□□ 1.85
SPSB3-201ENST00000301717 XRN1Q8IZH2 1706 aaKnown RBP26.62■■□□□ 1.85
SPSB3-201ENST00000301717 DHX57Q6P158 1386 aaKnown RBP26.62■■□□□ 1.85
SPSB3-201ENST00000301717 PIK3C2GO75747 1445 aa26.61■■□□□ 1.85
SPSB3-201ENST00000301717 KDM2AQ9Y2K7 1162 aa26.61■■□□□ 1.85
SPSB3-201ENST00000301717 DCAF11Q8TEB1 546 aa26.58■■□□□ 1.85
SPSB3-201ENST00000301717 MYOM2P54296 1465 aa26.57■■□□□ 1.84
SPSB3-201ENST00000301717 TMEM132EQ6IEE7 984 aa26.57■■□□□ 1.84
SPSB3-201ENST00000301717 C14orf37Q86TY3 774 aa26.57■■□□□ 1.84
SPSB3-201ENST00000301717 SIN3AQ96ST3 1273 aa26.57■■□□□ 1.84
SPSB3-201ENST00000301717 ASXL1Q8IXJ9 1541 aa26.57■■□□□ 1.84
SPSB3-201ENST00000301717 NRXN1Q9ULB1 1477 aa26.56■■□□□ 1.84
SPSB3-201ENST00000301717 CFAP70Q5T0N1 1121 aa26.56■■□□□ 1.84
SPSB3-201ENST00000301717 MSH6P52701 1360 aa26.55■■□□□ 1.84
SPSB3-201ENST00000301717 ROBO2Q9HCK4 1378 aa26.54■■□□□ 1.84
SPSB3-201ENST00000301717 STK26Q9P289 416 aa26.54■■□□□ 1.84
SPSB3-201ENST00000301717 PCGF6Q9BYE7 350 aa26.53■■□□□ 1.84
SPSB3-201ENST00000301717 NEUROD1Q13562 356 aa26.5■■□□□ 1.83
SPSB3-201ENST00000301717 C14orf93Q9H972 538 aaKnown RBP26.5■■□□□ 1.83
SPSB3-201ENST00000301717 HSPA1LP34931 641 aa26.49■■□□□ 1.83
SPSB3-201ENST00000301717 PTCH1Q13635 1447 aa26.47■■□□□ 1.83
SPSB3-201ENST00000301717 NCOA3Q9Y6Q9 1424 aa26.47■■□□□ 1.83
SPSB3-201ENST00000301717 C19orf44Q9H6X5 657 aa26.47■■□□□ 1.83
SPSB3-201ENST00000301717 LRPPRCP42704 1394 aaKnown RBP26.46■■□□□ 1.83
SPSB3-201ENST00000301717 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.45■■□□□ 1.83
SPSB3-201ENST00000301717 YTHDC2Q9H6S0 1430 aaKnown RBP26.44■■□□□ 1.82
SPSB3-201ENST00000301717 WAPLQ7Z5K2 1190 aa26.44■■□□□ 1.82
SPSB3-201ENST00000301717 SLAIN2Q9P270 581 aa26.43■■□□□ 1.82
SPSB3-201ENST00000301717 PRAG1Q86YV5 1406 aa26.43■■□□□ 1.82
SPSB3-201ENST00000301717 PLEKHH1Q9ULM0 1364 aa26.42■■□□□ 1.82
SPSB3-201ENST00000301717 ATF3P18847 181 aa26.42■■□□□ 1.82
SPSB3-201ENST00000301717 NALCNQ8IZF0 1738 aa26.42■■□□□ 1.82
SPSB3-201ENST00000301717 ADGRL3Q9HAR2 1447 aa26.42■■□□□ 1.82
SPSB3-201ENST00000301717 L3MBTL2Q969R5 705 aa26.41■■□□□ 1.82
SPSB3-201ENST00000301717 CADPS2Q86UW7 1296 aa26.39■■□□□ 1.82
SPSB3-201ENST00000301717 TECPR2O15040 1411 aa26.39■■□□□ 1.82
SPSB3-201ENST00000301717 ABCC11Q96J66 1382 aa26.39■■□□□ 1.82
SPSB3-201ENST00000301717 LAMC1P11047 1609 aa26.39■■□□□ 1.82
SPSB3-201ENST00000301717 ADGRB1O14514 1584 aa26.39■■□□□ 1.81
SPSB3-201ENST00000301717 FAM135BQ49AJ0 1406 aa26.39■■□□□ 1.81
SPSB3-201ENST00000301717 ROBO1Q9Y6N7 1651 aa26.38■■□□□ 1.81
SPSB3-201ENST00000301717 DCCP43146 1447 aa26.35■■□□□ 1.81
SPSB3-201ENST00000301717 SAFB2Q14151 953 aaKnown RBP eCLIP26.34■■□□□ 1.81
SPSB3-201ENST00000301717 STAC3Q96MF2 364 aa26.34■■□□□ 1.81
SPSB3-201ENST00000301717 TRAK1Q9UPV9 953 aa26.34■■□□□ 1.81
SPSB3-201ENST00000301717 KNDC1Q76NI1 1749 aa26.34■■□□□ 1.81
SPSB3-201ENST00000301717 MST1RQ04912 1400 aa26.34■■□□□ 1.81
SPSB3-201ENST00000301717 NBPF1Q3BBV0 1214 aa26.31■■□□□ 1.8
SPSB3-201ENST00000301717 PRAM1Q96QH2 718 aa26.31■■□□□ 1.8
SPSB3-201ENST00000301717 BRINP3Q76B58 766 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms