RNA–Protein interactions for RNA: ENST00000297904.3

VEGFD-201, Transcript of vascular endothelial growth factor D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFD, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFD-201ENST00000297904 URB2Q14146 1524 aaKnown RBP9.33□□□□□ -0.92
VEGFD-201ENST00000297904 RBM47A0AV96 593 aaKnown RBP9.33□□□□□ -0.92
VEGFD-201ENST00000297904 POTEDQ86YR6 584 aa9.33□□□□□ -0.92
VEGFD-201ENST00000297904 KIF21BO75037 1637 aa9.32□□□□□ -0.92
VEGFD-201ENST00000297904 PTGDRQ13258 359 aa9.32□□□□□ -0.92
VEGFD-201ENST00000297904 CFAP70Q5T0N1 1121 aa9.32□□□□□ -0.92
VEGFD-201ENST00000297904 MRRFQ96E11 262 aaKnown RBP9.32□□□□□ -0.92
VEGFD-201ENST00000297904 PHOX2BQ99453 314 aa9.32□□□□□ -0.92
VEGFD-201ENST00000297904 CLK2P49760 499 aaKnown RBP9.31□□□□□ -0.92
VEGFD-201ENST00000297904 SRPK2P78362 688 aaKnown RBP9.31□□□□□ -0.92
VEGFD-201ENST00000297904 TBC1D2BQ9UPU7 963 aa9.31□□□□□ -0.92
VEGFD-201ENST00000297904 ITGAEP38570 1179 aa9.29□□□□□ -0.92
VEGFD-201ENST00000297904 ADAMTS19Q8TE59 1207 aa9.29□□□□□ -0.92
VEGFD-201ENST00000297904 DDX12PQ92771 950 aa9.29□□□□□ -0.92
VEGFD-201ENST00000297904 VRTNQ9H8Y1 702 aa9.29□□□□□ -0.92
VEGFD-201ENST00000297904 DNMBPQ6XZF7 1577 aa9.29□□□□□ -0.92
VEGFD-201ENST00000297904 SMARCA5O60264 1052 aaPredicted RBP9.28□□□□□ -0.92
VEGFD-201ENST00000297904 PRIM1P49642 420 aaKnown RBP9.28□□□□□ -0.92
VEGFD-201ENST00000297904 HDGFL1Q5TGJ6 251 aa9.28□□□□□ -0.92
VEGFD-201ENST00000297904 TOPBP1Q92547 1522 aa9.28□□□□□ -0.92
VEGFD-201ENST00000297904 DDX10Q13206 875 aaKnown RBP9.27□□□□□ -0.92
VEGFD-201ENST00000297904 MAP3K13O43283 966 aa9.27□□□□□ -0.93
VEGFD-201ENST00000297904 TXNDC2Q86VQ3 553 aa9.27□□□□□ -0.93
VEGFD-201ENST00000297904 TMEM259Q4ZIN3 620 aa9.26□□□□□ -0.93
VEGFD-201ENST00000297904 IFT140Q96RY7 1462 aa9.26□□□□□ -0.93
VEGFD-201ENST00000297904 FANCIQ9NVI1 1328 aa9.25□□□□□ -0.93
VEGFD-201ENST00000297904 TMEM88BA6NKF7 163 aa9.25□□□□□ -0.93
VEGFD-201ENST00000297904 NLRP7Q8WX94 980 aa9.25□□□□□ -0.93
VEGFD-201ENST00000297904 TRIM52Q96A61 297 aa9.25□□□□□ -0.93
VEGFD-201ENST00000297904 CWC22Q9HCG8 908 aaKnown RBP9.25□□□□□ -0.93
VEGFD-201ENST00000297904 RAPGEF2Q9Y4G8 1499 aa9.25□□□□□ -0.93
VEGFD-201ENST00000297904 MAP3K9P80192 1104 aa9.24□□□□□ -0.93
VEGFD-201ENST00000297904 FAM217BQ9NTX9 383 aaPredicted RBP9.24□□□□□ -0.93
VEGFD-201ENST00000297904 KANK4Q5T7N3 995 aaPredicted RBP9.24□□□□□ -0.93
VEGFD-201ENST00000297904 CCER2I3L3R5 266 aa9.23□□□□□ -0.93
VEGFD-201ENST00000297904 PPP1R12CQ9BZL4 782 aa9.23□□□□□ -0.93
VEGFD-201ENST00000297904 ANP32CO43423 234 aa9.22□□□□□ -0.93
VEGFD-201ENST00000297904 CHADLQ6NUI6 762 aa9.22□□□□□ -0.93
VEGFD-201ENST00000297904 CDCA8Q53HL2 280 aa9.22□□□□□ -0.93
VEGFD-201ENST00000297904 LIMD1Q9UGP4 676 aa9.22□□□□□ -0.93
VEGFD-201ENST00000297904 RRBP1Q9P2E9 1410 aaKnown RBP9.22□□□□□ -0.93
VEGFD-201ENST00000297904 TBC1D2Q9BYX2 928 aa9.21□□□□□ -0.93
VEGFD-201ENST00000297904 GNEQ9Y223 722 aaKnown RBP9.21□□□□□ -0.93
VEGFD-201ENST00000297904 SYNJ1O43426 1573 aa9.21□□□□□ -0.94
VEGFD-201ENST00000297904 FOXK1P85037 733 aa9.21□□□□□ -0.94
VEGFD-201ENST00000297904 GOLGA2Q08379 1002 aa9.21□□□□□ -0.94
VEGFD-201ENST00000297904 AKT1S1Q96B36 256 aa9.21□□□□□ -0.94
VEGFD-201ENST00000297904 DRC1Q96MC2 740 aa9.21□□□□□ -0.94
VEGFD-201ENST00000297904 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
VEGFD-201ENST00000297904 TCF3P15923 654 aa9.2□□□□□ -0.94
VEGFD-201ENST00000297904 LMOD1P29536 600 aaPredicted RBP9.2□□□□□ -0.94
VEGFD-201ENST00000297904 PPP2R2DQ66LE6 453 aa9.2□□□□□ -0.94
VEGFD-201ENST00000297904 CCNB3Q8WWL7 1395 aa9.2□□□□□ -0.94
VEGFD-201ENST00000297904 ZNF16P17020 682 aaPredicted RBP9.19□□□□□ -0.94
VEGFD-201ENST00000297904 REM2Q8IYK8 340 aaPredicted RBP9.19□□□□□ -0.94
VEGFD-201ENST00000297904 SPATA32Q96LK8 384 aa9.19□□□□□ -0.94
VEGFD-201ENST00000297904 POLA1P09884 1462 aaPredicted RBP9.19□□□□□ -0.94
VEGFD-201ENST00000297904 TARBP1Q13395 1621 aaKnown RBP9.19□□□□□ -0.94
VEGFD-201ENST00000297904 PALM3A6NDB9 673 aaPredicted RBP9.19□□□□□ -0.94
VEGFD-201ENST00000297904 DNAJC14Q6Y2X3 702 aaPredicted RBP9.19□□□□□ -0.94
VEGFD-201ENST00000297904 PLPP6Q8IY26 295 aa9.18□□□□□ -0.94
VEGFD-201ENST00000297904 UPF1Q92900 1129 aaKnown RBP eCLIP9.18□□□□□ -0.94
VEGFD-201ENST00000297904 WDR97A6NE52 1622 aa9.18□□□□□ -0.94
VEGFD-201ENST00000297904 CUX1P39880 1505 aa9.18□□□□□ -0.94
VEGFD-201ENST00000297904 ZNF608Q9ULD9 1512 aaPredicted RBP9.18□□□□□ -0.94
VEGFD-201ENST00000297904 KIF12Q96FN5 646 aa9.17□□□□□ -0.94
VEGFD-201ENST00000297904 EIF4G3O43432 1585 aaKnown RBP9.17□□□□□ -0.94
VEGFD-201ENST00000297904 BRD2P25440 801 aaKnown RBP9.17□□□□□ -0.94
VEGFD-201ENST00000297904 CANXP27824 592 aaKnown RBP9.17□□□□□ -0.94
VEGFD-201ENST00000297904 FAM161AQ3B820 660 aa9.17□□□□□ -0.94
VEGFD-201ENST00000297904 SREK1Q8WXA9 508 aaKnown RBP9.17□□□□□ -0.94
VEGFD-201ENST00000297904 CDHR5Q9HBB8 845 aa9.17□□□□□ -0.94
VEGFD-201ENST00000297904 RAB3GAP2Q9H2M9 1393 aa9.17□□□□□ -0.94
VEGFD-201ENST00000297904 FGD5Q6ZNL6 1462 aa9.17□□□□□ -0.94
VEGFD-201ENST00000297904 DEKP35659 375 aaKnown RBP9.16□□□□□ -0.94
VEGFD-201ENST00000297904 TMC2Q8TDI7 906 aa9.16□□□□□ -0.94
VEGFD-201ENST00000297904 PPP1R1BQ9UD71 204 aaPredicted RBP9.16□□□□□ -0.94
VEGFD-201ENST00000297904 PTGER2P43116 358 aa9.15□□□□□ -0.94
VEGFD-201ENST00000297904 BCL2L13Q9BXK5 485 aa9.15□□□□□ -0.94
VEGFD-201ENST00000297904 FARP1Q9Y4F1 1045 aaPredicted RBP9.15□□□□□ -0.94
VEGFD-201ENST00000297904 ARAP1Q96P48 1450 aa9.15□□□□□ -0.94
VEGFD-201ENST00000297904 MAPKBP1O60336 1514 aa9.15□□□□□ -0.94
VEGFD-201ENST00000297904 NOM1Q5C9Z4 860 aaKnown RBP9.15□□□□□ -0.94
VEGFD-201ENST00000297904 CSPP1Q1MSJ5 1256 aa9.14□□□□□ -0.95
VEGFD-201ENST00000297904 SIN3AQ96ST3 1273 aa9.14□□□□□ -0.95
VEGFD-201ENST00000297904 HIRIP3Q9BW71 556 aaPredicted RBP9.14□□□□□ -0.95
VEGFD-201ENST00000297904 NPDC1Q9NQX5 325 aaPredicted RBP9.14□□□□□ -0.95
VEGFD-201ENST00000297904 AP1G2O75843 785 aa9.14□□□□□ -0.95
VEGFD-201ENST00000297904 ATG7O95352 703 aa9.14□□□□□ -0.95
VEGFD-201ENST00000297904 GIPC2Q8TF65 315 aa9.14□□□□□ -0.95
VEGFD-201ENST00000297904 TFIP11Q9UBB9 837 aaKnown RBP9.14□□□□□ -0.95
VEGFD-201ENST00000297904 IRX6P78412 446 aaPredicted RBP9.13□□□□□ -0.95
VEGFD-201ENST00000297904 RAD54L2Q9Y4B4 1467 aa9.13□□□□□ -0.95
VEGFD-201ENST00000297904 UCN2Q96RP3 112 aa9.12□□□□□ -0.95
VEGFD-201ENST00000297904 VAC14Q08AM6 782 aa9.12□□□□□ -0.95
VEGFD-201ENST00000297904 RIC3Q7Z5B4 369 aa9.12□□□□□ -0.95
VEGFD-201ENST00000297904 SIRT1Q96EB6 747 aa9.12□□□□□ -0.95
VEGFD-201ENST00000297904 SETD5Q9C0A6 1442 aa9.12□□□□□ -0.95
VEGFD-201ENST00000297904 BIVM-ERCC5R4GMW8 1640 aa9.11□□□□□ -0.95
VEGFD-201ENST00000297904 AQRO60306 1485 aaKnown RBP eCLIP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms