RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ANKRD30BQ9BXX2 1392 aa29.27■■■□□ 2.28
TIMP4-201ENST00000287814 ZNF326Q5BKZ1 582 aaKnown RBP29.25■■■□□ 2.27
TIMP4-201ENST00000287814 SENP3Q9H4L4 574 aaPredicted RBP29.25■■■□□ 2.27
TIMP4-201ENST00000287814 IQGAP1P46940 1657 aa29.23■■■□□ 2.27
TIMP4-201ENST00000287814 KIF1BO60333 1816 aa29.23■■■□□ 2.27
TIMP4-201ENST00000287814 HDGFP51858 240 aaKnown RBP29.22■■■□□ 2.27
TIMP4-201ENST00000287814 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.21■■■□□ 2.27
TIMP4-201ENST00000287814 ZNF335Q9H4Z2 1342 aaPredicted RBP29.21■■■□□ 2.27
TIMP4-201ENST00000287814 PCGF6Q9BYE7 350 aa29.21■■■□□ 2.27
TIMP4-201ENST00000287814 PPP1R15AO75807 674 aaPredicted RBP29.2■■■□□ 2.26
TIMP4-201ENST00000287814 SPATA31E1Q6ZUB1 1445 aa29.18■■■□□ 2.26
TIMP4-201ENST00000287814 PLEKHG1Q9ULL1 1385 aa29.17■■■□□ 2.26
TIMP4-201ENST00000287814 RGL3Q3MIN7 710 aa29.17■■■□□ 2.26
TIMP4-201ENST00000287814 SLC26A8Q96RN1 970 aa29.17■■■□□ 2.26
TIMP4-201ENST00000287814 NEXMIFQ5QGS0 1516 aa29.16■■■□□ 2.26
TIMP4-201ENST00000287814 BCANQ96GW7 911 aa29.14■■■□□ 2.26
TIMP4-201ENST00000287814 LTBP4Q8N2S1 1624 aa29.13■■■□□ 2.25
TIMP4-201ENST00000287814 DHX57Q6P158 1386 aaKnown RBP29.12■■■□□ 2.25
TIMP4-201ENST00000287814 RPGRIP1LQ68CZ1 1315 aa29.12■■■□□ 2.25
TIMP4-201ENST00000287814 ADAMTS13Q76LX8 1427 aa29.08■■■□□ 2.25
TIMP4-201ENST00000287814 VGFO15240 615 aaPredicted RBP29.06■■■□□ 2.24
TIMP4-201ENST00000287814 CERKQ8TCT0 537 aa29.05■■■□□ 2.24
TIMP4-201ENST00000287814 TBX22Q9Y458 520 aa29.05■■■□□ 2.24
TIMP4-201ENST00000287814 PPLO60437 1756 aa29.03■■■□□ 2.24
TIMP4-201ENST00000287814 ADGRF5Q8IZF2 1346 aa29.02■■■□□ 2.24
TIMP4-201ENST00000287814 NRXN3Q9Y4C0 1643 aa29.02■■■□□ 2.24
TIMP4-201ENST00000287814 STRCP1A6NGW2 1772 aa29.02■■■□□ 2.24
TIMP4-201ENST00000287814 SETBP1Q9Y6X0 1596 aa29■■■□□ 2.23
TIMP4-201ENST00000287814 SIN3AQ96ST3 1273 aa28.99■■■□□ 2.23
TIMP4-201ENST00000287814 KCNA6P17658 529 aa28.98■■■□□ 2.23
TIMP4-201ENST00000287814 IFT172Q9UG01 1749 aa28.97■■■□□ 2.23
TIMP4-201ENST00000287814 CPS1P31327 1500 aa28.95■■■□□ 2.22
TIMP4-201ENST00000287814 DIP2AQ14689 1571 aa28.94■■■□□ 2.22
TIMP4-201ENST00000287814 METP08581 1390 aa28.94■■■□□ 2.22
TIMP4-201ENST00000287814 PTPRUQ92729 1446 aa28.92■■■□□ 2.22
TIMP4-201ENST00000287814 DCAF11Q8TEB1 546 aa28.91■■■□□ 2.22
TIMP4-201ENST00000287814 LRRC7Q96NW7 1537 aa28.91■■■□□ 2.22
TIMP4-201ENST00000287814 KDM2AQ9Y2K7 1162 aa28.9■■■□□ 2.22
TIMP4-201ENST00000287814 PIK3R4Q99570 1358 aa28.9■■■□□ 2.22
TIMP4-201ENST00000287814 NEUROD1Q13562 356 aa28.89■■■□□ 2.22
TIMP4-201ENST00000287814 ALKQ9UM73 1620 aa28.89■■■□□ 2.22
TIMP4-201ENST00000287814 CHD2O14647 1828 aaKnown RBP28.89■■■□□ 2.21
TIMP4-201ENST00000287814 NWD1Q149M9 1564 aa28.88■■■□□ 2.21
TIMP4-201ENST00000287814 MYOM2P54296 1465 aa28.88■■■□□ 2.21
TIMP4-201ENST00000287814 PIK3C2GO75747 1445 aa28.88■■■□□ 2.21
TIMP4-201ENST00000287814 NRXN1Q9ULB1 1477 aa28.87■■■□□ 2.21
TIMP4-201ENST00000287814 RBM33Q96EV2 1170 aaKnown RBP28.87■■■□□ 2.21
TIMP4-201ENST00000287814 AMOTL2Q9Y2J4 779 aa28.87■■■□□ 2.21
TIMP4-201ENST00000287814 SETD1AO15047 1707 aaKnown RBP28.85■■■□□ 2.21
TIMP4-201ENST00000287814 PROSER2Q86WR7 435 aaPredicted RBP28.84■■■□□ 2.21
TIMP4-201ENST00000287814 IQSEC2Q5JU85 1478 aa28.83■■■□□ 2.21
TIMP4-201ENST00000287814 NKTRP30414 1462 aaKnown RBP28.81■■■□□ 2.2
TIMP4-201ENST00000287814 TMEM94Q12767 1356 aa28.81■■■□□ 2.2
TIMP4-201ENST00000287814 CFAP70Q5T0N1 1121 aa28.81■■■□□ 2.2
TIMP4-201ENST00000287814 C14orf93Q9H972 538 aaKnown RBP28.81■■■□□ 2.2
TIMP4-201ENST00000287814 L3MBTL2Q969R5 705 aa28.8■■■□□ 2.2
TIMP4-201ENST00000287814 STAC3Q96MF2 364 aa28.8■■■□□ 2.2
TIMP4-201ENST00000287814 TMEM132EQ6IEE7 984 aa28.79■■■□□ 2.2
TIMP4-201ENST00000287814 FBXO41Q8TF61 875 aa28.77■■■□□ 2.2
TIMP4-201ENST00000287814 XRN1Q8IZH2 1706 aaKnown RBP28.77■■■□□ 2.2
TIMP4-201ENST00000287814 XIRP1Q702N8 1843 aaKnown RBP28.76■■■□□ 2.2
TIMP4-201ENST00000287814 ASXL1Q8IXJ9 1541 aa28.76■■■□□ 2.19
TIMP4-201ENST00000287814 UBAP1LF5GYI3 381 aa28.72■■■□□ 2.19
TIMP4-201ENST00000287814 ILDR1Q86SU0 546 aaPredicted RBP28.71■■■□□ 2.19
TIMP4-201ENST00000287814 STK26Q9P289 416 aa28.71■■■□□ 2.19
TIMP4-201ENST00000287814 ROBO2Q9HCK4 1378 aa28.7■■■□□ 2.18
TIMP4-201ENST00000287814 LRPPRCP42704 1394 aaKnown RBP28.69■■■□□ 2.18
TIMP4-201ENST00000287814 PRAG1Q86YV5 1406 aa28.67■■■□□ 2.18
TIMP4-201ENST00000287814 YTHDC2Q9H6S0 1430 aaKnown RBP28.67■■■□□ 2.18
TIMP4-201ENST00000287814 LAMC1P11047 1609 aa28.66■■■□□ 2.18
TIMP4-201ENST00000287814 PTCH1Q13635 1447 aa28.65■■■□□ 2.18
TIMP4-201ENST00000287814 NCOA3Q9Y6Q9 1424 aa28.65■■■□□ 2.18
TIMP4-201ENST00000287814 ABCC11Q96J66 1382 aa28.65■■■□□ 2.18
TIMP4-201ENST00000287814 ADGRB1O14514 1584 aa28.65■■■□□ 2.18
TIMP4-201ENST00000287814 TOM1O60784 492 aa28.64■■■□□ 2.18
TIMP4-201ENST00000287814 C14orf37Q86TY3 774 aa28.63■■■□□ 2.17
TIMP4-201ENST00000287814 CCER1Q8TC90 406 aaPredicted RBP28.63■■■□□ 2.17
TIMP4-201ENST00000287814 TECPR2O15040 1411 aa28.63■■■□□ 2.17
TIMP4-201ENST00000287814 TONSLQ96HA7 1378 aa28.62■■■□□ 2.17
TIMP4-201ENST00000287814 MSH6P52701 1360 aa28.61■■■□□ 2.17
TIMP4-201ENST00000287814 WAPLQ7Z5K2 1190 aa28.61■■■□□ 2.17
TIMP4-201ENST00000287814 CLSPNQ9HAW4 1339 aa28.61■■■□□ 2.17
TIMP4-201ENST00000287814 NBPF1Q3BBV0 1214 aa28.61■■■□□ 2.17
TIMP4-201ENST00000287814 C19orf44Q9H6X5 657 aa28.61■■■□□ 2.17
TIMP4-201ENST00000287814 PIP4K2BP78356 416 aa28.59■■■□□ 2.17
TIMP4-201ENST00000287814 NBPF8Q3BBV2 869 aa28.58■■■□□ 2.17
TIMP4-201ENST00000287814 PLEKHH1Q9ULM0 1364 aa28.58■■■□□ 2.17
TIMP4-201ENST00000287814 TRAK1Q9UPV9 953 aa28.56■■■□□ 2.16
TIMP4-201ENST00000287814 KNDC1Q76NI1 1749 aa28.55■■■□□ 2.16
TIMP4-201ENST00000287814 SIRT1Q96EB6 747 aa28.54■■■□□ 2.16
TIMP4-201ENST00000287814 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.54■■■□□ 2.16
TIMP4-201ENST00000287814 SCAF1Q9H7N4 1312 aaKnown RBP28.54■■■□□ 2.16
TIMP4-201ENST00000287814 ADGRL3Q9HAR2 1447 aa28.54■■■□□ 2.16
TIMP4-201ENST00000287814 KIAA1210Q9ULL0 1709 aa28.53■■■□□ 2.16
TIMP4-201ENST00000287814 FAM135BQ49AJ0 1406 aa28.52■■■□□ 2.16
TIMP4-201ENST00000287814 NALCNQ8IZF0 1738 aa28.51■■■□□ 2.15
TIMP4-201ENST00000287814 ATF3P18847 181 aa28.51■■■□□ 2.15
TIMP4-201ENST00000287814 PRAM1Q96QH2 718 aa28.51■■■□□ 2.15
TIMP4-201ENST00000287814 CADPS2Q86UW7 1296 aa28.5■■■□□ 2.15
TIMP4-201ENST00000287814 SLAIN2Q9P270 581 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms