RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 MYO15BQ96JP2 1530 aa24.95■■□□□ 1.58
CACNA1B-201ENST00000277549 IFIT2P09913 472 aaKnown RBP24.95■■□□□ 1.58
CACNA1B-201ENST00000277549 NEUROD6Q96NK8 337 aa24.95■■□□□ 1.58
CACNA1B-201ENST00000277549 R3HCC1Q9Y3T6 440 aaKnown RBP24.95■■□□□ 1.58
CACNA1B-201ENST00000277549 KIF3AQ9Y496 699 aa24.95■■□□□ 1.58
CACNA1B-201ENST00000277549 CPLX1O14810 134 aa24.94■■□□□ 1.58
CACNA1B-201ENST00000277549 ERICH2A1L162 156 aa24.94■■□□□ 1.58
CACNA1B-201ENST00000277549 RBM19Q9Y4C8 960 aaKnown RBP24.93■■□□□ 1.58
CACNA1B-201ENST00000277549 ARHGAP35Q9NRY4 1499 aa24.93■■□□□ 1.58
CACNA1B-201ENST00000277549 CCDC180Q9P1Z9 1646 aa24.92■■□□□ 1.58
CACNA1B-201ENST00000277549 CEP164Q9UPV0 1460 aa24.91■■□□□ 1.58
CACNA1B-201ENST00000277549 CARMIL2Q6F5E8 1435 aa24.9■■□□□ 1.58
CACNA1B-201ENST00000277549 SETQ01105 290 aaPredicted RBP24.9■■□□□ 1.58
CACNA1B-201ENST00000277549 ATF3P18847 181 aa24.89■■□□□ 1.58
CACNA1B-201ENST00000277549 PHF14O94880 888 aa24.89■■□□□ 1.57
CACNA1B-201ENST00000277549 WASHC4Q2M389 1173 aa24.89■■□□□ 1.57
CACNA1B-201ENST00000277549 ATP2B2Q01814 1243 aa24.88■■□□□ 1.57
CACNA1B-201ENST00000277549 RALBP1Q15311 655 aa24.88■■□□□ 1.57
CACNA1B-201ENST00000277549 STRN4Q9NRL3 753 aa24.88■■□□□ 1.57
CACNA1B-201ENST00000277549 CCDC47Q96A33 483 aaKnown RBP24.88■■□□□ 1.57
CACNA1B-201ENST00000277549 SF3B2Q13435 895 aaKnown RBP24.87■■□□□ 1.57
CACNA1B-201ENST00000277549 TTLL5Q6EMB2 1281 aa24.87■■□□□ 1.57
CACNA1B-201ENST00000277549 HSP90AB2PQ58FF8 381 aa24.87■■□□□ 1.57
CACNA1B-201ENST00000277549 TRDNQ13061 729 aa24.87■■□□□ 1.57
CACNA1B-201ENST00000277549 RBM42Q9BTD8 480 aaKnown RBP24.86■■□□□ 1.57
CACNA1B-201ENST00000277549 CCDC70Q6NSX1 233 aa24.86■■□□□ 1.57
CACNA1B-201ENST00000277549 CHMP4CQ96CF2 233 aa24.86■■□□□ 1.57
CACNA1B-201ENST00000277549 NLRP2Q9NX02 1062 aa24.85■■□□□ 1.57
CACNA1B-201ENST00000277549 EPS15P42566 896 aa24.85■■□□□ 1.57
CACNA1B-201ENST00000277549 RIC3Q7Z5B4 369 aa24.84■■□□□ 1.57
CACNA1B-201ENST00000277549 BICD2Q8TD16 824 aa24.84■■□□□ 1.57
CACNA1B-201ENST00000277549 KANK4Q5T7N3 995 aaPredicted RBP24.83■■□□□ 1.57
CACNA1B-201ENST00000277549 SETD5Q9C0A6 1442 aa24.83■■□□□ 1.57
CACNA1B-201ENST00000277549 HMOX1P09601 288 aa24.83■■□□□ 1.57
CACNA1B-201ENST00000277549 PANK3Q9H999 370 aa24.83■■□□□ 1.56
CACNA1B-201ENST00000277549 G3BP1Q13283 466 aaKnown RBP eCLIP24.82■■□□□ 1.56
CACNA1B-201ENST00000277549 FHAD1B1AJZ9 1412 aa24.81■■□□□ 1.56
CACNA1B-201ENST00000277549 FKBP5Q13451 457 aaPredicted RBP24.81■■□□□ 1.56
CACNA1B-201ENST00000277549 TDRD9Q8NDG6 1382 aaKnown RBP24.81■■□□□ 1.56
CACNA1B-201ENST00000277549 ANKRD30AQ9BXX3 1397 aa24.81■■□□□ 1.56
CACNA1B-201ENST00000277549 WDR70Q9NW82 654 aa24.8■■□□□ 1.56
CACNA1B-201ENST00000277549 DDX49Q9Y6V7 483 aaKnown RBP24.8■■□□□ 1.56
CACNA1B-201ENST00000277549 VPS37CA5D8V6 355 aaPredicted RBP24.8■■□□□ 1.56
CACNA1B-201ENST00000277549 CPLX2Q6PUV4 134 aaKnown RBP24.8■■□□□ 1.56
CACNA1B-201ENST00000277549 WWC2Q6AWC2 1192 aa24.79■■□□□ 1.56
CACNA1B-201ENST00000277549 HOMER1Q86YM7 354 aa24.79■■□□□ 1.56
CACNA1B-201ENST00000277549 PPM1FP49593 454 aaPredicted RBP24.79■■□□□ 1.56
CACNA1B-201ENST00000277549 IPO7O95373 1038 aaKnown RBP24.79■■□□□ 1.56
CACNA1B-201ENST00000277549 RBM5P52756 815 aaKnown RBP eCLIP24.79■■□□□ 1.56
CACNA1B-201ENST00000277549 CHMP4BP1P59074 171 aa24.79■■□□□ 1.56
CACNA1B-201ENST00000277549 RRP12Q5JTH9 1297 aaKnown RBP24.78■■□□□ 1.56
CACNA1B-201ENST00000277549 COG6Q9Y2V7 657 aa24.77■■□□□ 1.56
CACNA1B-201ENST00000277549 ATP2B1P20020 1258 aa24.76■■□□□ 1.55
CACNA1B-201ENST00000277549 ANKRD20A12PQ8NF67 263 aa24.76■■□□□ 1.55
CACNA1B-201ENST00000277549 LRRFIP1Q32MZ4 808 aaKnown RBP24.76■■□□□ 1.55
CACNA1B-201ENST00000277549 PAXIP1Q6ZW49 1069 aaPredicted RBP24.76■■□□□ 1.55
CACNA1B-201ENST00000277549 RAPGEF4Q8WZA2 1011 aa24.75■■□□□ 1.55
CACNA1B-201ENST00000277549 TSPYL4Q9UJ04 414 aa24.74■■□□□ 1.55
CACNA1B-201ENST00000277549 PDILTQ8N807 584 aa24.74■■□□□ 1.55
CACNA1B-201ENST00000277549 DDX58O95786 925 aaKnown RBP24.74■■□□□ 1.55
CACNA1B-201ENST00000277549 DHX37Q8IY37 1157 aaKnown RBP24.74■■□□□ 1.55
CACNA1B-201ENST00000277549 MYCNP04198 464 aaPredicted RBP24.72■■□□□ 1.55
CACNA1B-201ENST00000277549 DNAJC2Q99543 621 aaKnown RBP24.72■■□□□ 1.55
CACNA1B-201ENST00000277549 TNIKQ9UKE5 1360 aa24.72■■□□□ 1.55
CACNA1B-201ENST00000277549 ZKSCAN1P17029 563 aaPredicted RBP24.72■■□□□ 1.55
CACNA1B-201ENST00000277549 FAM161AQ3B820 660 aa24.71■■□□□ 1.55
CACNA1B-201ENST00000277549 RIPK4P57078 832 aa24.71■■□□□ 1.55
CACNA1B-201ENST00000277549 RUFY2Q8WXA3 655 aa24.7■■□□□ 1.54
CACNA1B-201ENST00000277549 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.7■■□□□ 1.54
CACNA1B-201ENST00000277549 ZNF771Q7L3S4 317 aaPredicted RBP24.69■■□□□ 1.54
CACNA1B-201ENST00000277549 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
CACNA1B-201ENST00000277549 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
CACNA1B-201ENST00000277549 EVC2Q86UK5 1308 aa24.68■■□□□ 1.54
CACNA1B-201ENST00000277549 CRBNQ96SW2 442 aa24.68■■□□□ 1.54
CACNA1B-201ENST00000277549 ZKSCAN2Q63HK3 967 aa24.67■■□□□ 1.54
CACNA1B-201ENST00000277549 CGNL1Q0VF96 1302 aa24.66■■□□□ 1.54
CACNA1B-201ENST00000277549 OFD1O75665 1012 aa24.66■■□□□ 1.54
CACNA1B-201ENST00000277549 FAM69CQ0P6D2 419 aa24.66■■□□□ 1.54
CACNA1B-201ENST00000277549 CCER2I3L3R5 266 aa24.66■■□□□ 1.54
CACNA1B-201ENST00000277549 RALYLQ86SE5 291 aaKnown RBP24.66■■□□□ 1.54
CACNA1B-201ENST00000277549 HOOK1Q9UJC3 728 aaKnown RBP24.65■■□□□ 1.54
CACNA1B-201ENST00000277549 ESCO1Q5FWF5 840 aa24.65■■□□□ 1.54
CACNA1B-201ENST00000277549 RUFY1Q96T51 708 aa24.65■■□□□ 1.54
CACNA1B-201ENST00000277549 SOGA1O94964 1423 aa24.65■■□□□ 1.54
CACNA1B-201ENST00000277549 SAFBQ15424 915 aaKnown RBP eCLIP24.65■■□□□ 1.54
CACNA1B-201ENST00000277549 BRPF1P55201 1214 aaPredicted RBP24.65■■□□□ 1.54
CACNA1B-201ENST00000277549 SPINK5Q9NQ38 1064 aaPredicted RBP24.65■■□□□ 1.54
CACNA1B-201ENST00000277549 DIAPH1O60610 1272 aaKnown RBP24.64■■□□□ 1.54
CACNA1B-201ENST00000277549 ST20-MTHFSA0A0A6YYL1 179 aa24.64■■□□□ 1.53
CACNA1B-201ENST00000277549 CCDC97Q96F63 343 aaPredicted RBP24.64■■□□□ 1.53
CACNA1B-201ENST00000277549 ZHX3Q9H4I2 956 aa24.64■■□□□ 1.53
CACNA1B-201ENST00000277549 BICDL1Q6ZP65 573 aa24.63■■□□□ 1.53
CACNA1B-201ENST00000277549 DDX54Q8TDD1 881 aaKnown RBP24.63■■□□□ 1.53
CACNA1B-201ENST00000277549 KRT18P05783 430 aaKnown RBP24.63■■□□□ 1.53
CACNA1B-201ENST00000277549 KIF6Q6ZMV9 814 aa24.63■■□□□ 1.53
CACNA1B-201ENST00000277549 CAGE1Q8TC20 777 aa24.62■■□□□ 1.53
CACNA1B-201ENST00000277549 ATP6V1DQ9Y5K8 247 aa24.62■■□□□ 1.53
CACNA1B-201ENST00000277549 GPS2Q13227 327 aa24.62■■□□□ 1.53
CACNA1B-201ENST00000277549 CDK5RAP3Q96JB5 506 aa24.61■■□□□ 1.53
CACNA1B-201ENST00000277549 DDX11L8A8MPP1 907 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms