RNA–Protein interactions for RNA: ENST00000276105.3

SNX12-201, Transcript of sorting nexin 12, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene SNX12, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-201ENST00000276105 TMEM131LA2VDJ0 1609 aa15.39■□□□□ 0.05
SNX12-201ENST00000276105 PPARGC1BQ86YN6 1023 aaKnown RBP15.39■□□□□ 0.05
SNX12-201ENST00000276105 HSPA1LP34931 641 aa15.38■□□□□ 0.05
SNX12-201ENST00000276105 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNX12-201ENST00000276105 PLEKHG1Q9ULL1 1385 aa15.37■□□□□ 0.05
SNX12-201ENST00000276105 MYO5BQ9ULV0 1848 aa15.37■□□□□ 0.05
SNX12-201ENST00000276105 RIMS2Q9UQ26 1411 aa15.36■□□□□ 0.05
SNX12-201ENST00000276105 NKTRP30414 1462 aaKnown RBP15.36■□□□□ 0.05
SNX12-201ENST00000276105 NWD1Q149M9 1564 aa15.36■□□□□ 0.05
SNX12-201ENST00000276105 XIRP1Q702N8 1843 aaKnown RBP15.36■□□□□ 0.05
SNX12-201ENST00000276105 SLC26A8Q96RN1 970 aa15.35■□□□□ 0.05
SNX12-201ENST00000276105 PPP1R15AO75807 674 aaPredicted RBP15.34■□□□□ 0.05
SNX12-201ENST00000276105 BCANQ96GW7 911 aa15.33■□□□□ 0.04
SNX12-201ENST00000276105 TBX22Q9Y458 520 aa15.33■□□□□ 0.04
SNX12-201ENST00000276105 TMEM94Q12767 1356 aa15.33■□□□□ 0.04
SNX12-201ENST00000276105 CHGAP10645 457 aaKnown RBP15.32■□□□□ 0.04
SNX12-201ENST00000276105 NAIPQ13075 1403 aa15.32■□□□□ 0.04
SNX12-201ENST00000276105 DIP2AQ14689 1571 aa15.32■□□□□ 0.04
SNX12-201ENST00000276105 PROSER2Q86WR7 435 aaPredicted RBP15.31■□□□□ 0.04
SNX12-201ENST00000276105 SPHKAPQ2M3C7 1700 aa15.31■□□□□ 0.04
SNX12-201ENST00000276105 CHD2O14647 1828 aaKnown RBP15.31■□□□□ 0.04
SNX12-201ENST00000276105 FAM135BQ49AJ0 1406 aa15.3■□□□□ 0.04
SNX12-201ENST00000276105 PIK3R4Q99570 1358 aa15.3■□□□□ 0.04
SNX12-201ENST00000276105 HFM1A2PYH4 1435 aa15.29■□□□□ 0.04
SNX12-201ENST00000276105 NCOA3Q9Y6Q9 1424 aa15.29■□□□□ 0.04
SNX12-201ENST00000276105 ADAMTS13Q76LX8 1427 aa15.27■□□□□ 0.04
SNX12-201ENST00000276105 MSH6P52701 1360 aa15.26■□□□□ 0.03
SNX12-201ENST00000276105 TRPM2O94759 1503 aa15.26■□□□□ 0.03
SNX12-201ENST00000276105 SETBP1Q9Y6X0 1596 aa15.23■□□□□ 0.03
SNX12-201ENST00000276105 NUTM2DQ5VT03 806 aaPredicted RBP15.22■□□□□ 0.03
SNX12-201ENST00000276105 CLTCL1P53675 1640 aa15.21■□□□□ 0.03
SNX12-201ENST00000276105 ROBO1Q9Y6N7 1651 aa15.21■□□□□ 0.03
SNX12-201ENST00000276105 KIF1BO60333 1816 aa15.2■□□□□ 0.02
SNX12-201ENST00000276105 ZNF326Q5BKZ1 582 aaKnown RBP15.2■□□□□ 0.02
SNX12-201ENST00000276105 TRIM52Q96A61 297 aa15.2■□□□□ 0.02
SNX12-201ENST00000276105 RBM33Q96EV2 1170 aaKnown RBP15.2■□□□□ 0.02
SNX12-201ENST00000276105 SLAIN2Q9P270 581 aa15.2■□□□□ 0.02
SNX12-201ENST00000276105 ACIN1Q9UKV3 1341 aaKnown RBP15.19■□□□□ 0.02
SNX12-201ENST00000276105 NRXN3Q9Y4C0 1643 aa15.19■□□□□ 0.02
SNX12-201ENST00000276105 SENP3Q9H4L4 574 aaPredicted RBP15.19■□□□□ 0.02
SNX12-201ENST00000276105 C19orf44Q9H6X5 657 aa15.19■□□□□ 0.02
SNX12-201ENST00000276105 NEXMIFQ5QGS0 1516 aa15.18■□□□□ 0.02
SNX12-201ENST00000276105 CADPS2Q86UW7 1296 aa15.18■□□□□ 0.02
SNX12-201ENST00000276105 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
SNX12-201ENST00000276105 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
SNX12-201ENST00000276105 AMOTL2Q9Y2J4 779 aa15.18■□□□□ 0.02
SNX12-201ENST00000276105 C14orf37Q86TY3 774 aa15.16■□□□□ 0.02
SNX12-201ENST00000276105 XRN1Q8IZH2 1706 aaKnown RBP15.16■□□□□ 0.02
SNX12-201ENST00000276105 DCCP43146 1447 aa15.16■□□□□ 0.02
SNX12-201ENST00000276105 PTPRUQ92729 1446 aa15.16■□□□□ 0.02
SNX12-201ENST00000276105 RPGRIP1LQ68CZ1 1315 aa15.16■□□□□ 0.02
SNX12-201ENST00000276105 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
SNX12-201ENST00000276105 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.14■□□□□ 0.01
SNX12-201ENST00000276105 ATF3P18847 181 aa15.14■□□□□ 0.01
SNX12-201ENST00000276105 METP08581 1390 aa15.12■□□□□ 0.01
SNX12-201ENST00000276105 PHLPP1O60346 1717 aa15.12■□□□□ 0.01
SNX12-201ENST00000276105 JCADQ9P266 1359 aa15.11■□□□□ 0.01
SNX12-201ENST00000276105 PRAG1Q86YV5 1406 aa15.09■□□□□ 0.01
SNX12-201ENST00000276105 AHDC1Q5TGY3 1603 aaPredicted RBP15.09■□□□□ 0.01
SNX12-201ENST00000276105 SRCAPQ6ZRS2 3230 aa15.09■□□□□ 0.01
SNX12-201ENST00000276105 CCDC144AA2RUR9 1427 aa15.09■□□□□ 0.01
SNX12-201ENST00000276105 PPLO60437 1756 aa15.08■□□□□ 0.01
SNX12-201ENST00000276105 COL16A1Q07092 1604 aaPredicted RBP15.08■□□□□ 0
SNX12-201ENST00000276105 MPHOSPH9Q99550 1183 aa15.08■□□□□ 0
SNX12-201ENST00000276105 PTCH1Q13635 1447 aa15.08■□□□□ 0
SNX12-201ENST00000276105 ADGRL3Q9HAR2 1447 aa15.08■□□□□ 0
SNX12-201ENST00000276105 SETD1AO15047 1707 aaKnown RBP15.06■□□□□ 0
SNX12-201ENST00000276105 BRINP3Q76B58 766 aa15.05■□□□□ -0
SNX12-201ENST00000276105 RGS17Q9UGC6 210 aaPredicted RBP15.05■□□□□ -0
SNX12-201ENST00000276105 SPATA31A6Q5VVP1 1343 aa15.05■□□□□ -0
SNX12-201ENST00000276105 MST1RQ04912 1400 aa15.05■□□□□ -0
SNX12-201ENST00000276105 SETD5Q9C0A6 1442 aa15.05■□□□□ -0
SNX12-201ENST00000276105 SPATA31E1Q6ZUB1 1445 aa15.04■□□□□ -0
SNX12-201ENST00000276105 ANKRD30BQ9BXX2 1392 aa15.04■□□□□ -0
SNX12-201ENST00000276105 FOXD1Q16676 465 aa15.03■□□□□ -0
SNX12-201ENST00000276105 ASXL1Q8IXJ9 1541 aa15.02■□□□□ -0
SNX12-201ENST00000276105 NALCNQ8IZF0 1738 aa15.02□□□□□ -0.01
SNX12-201ENST00000276105 SHPRHQ149N8 1683 aa15.02□□□□□ -0.01
SNX12-201ENST00000276105 IFT172Q9UG01 1749 aa15□□□□□ -0.01
SNX12-201ENST00000276105 ROBO2Q9HCK4 1378 aa15□□□□□ -0.01
SNX12-201ENST00000276105 NHSL1Q5SYE7 1610 aa15□□□□□ -0.01
SNX12-201ENST00000276105 ADGRF5Q8IZF2 1346 aa14.98□□□□□ -0.01
SNX12-201ENST00000276105 RGL3Q3MIN7 710 aa14.98□□□□□ -0.01
SNX12-201ENST00000276105 C1orf167Q5SNV9 1468 aa14.97□□□□□ -0.01
SNX12-201ENST00000276105 LRRC59Q96AG4 307 aaKnown RBP14.97□□□□□ -0.01
SNX12-201ENST00000276105 TECPR2O15040 1411 aa14.97□□□□□ -0.01
SNX12-201ENST00000276105 RAB3GAP2Q9H2M9 1393 aa14.97□□□□□ -0.01
SNX12-201ENST00000276105 LAMC1P11047 1609 aa14.96□□□□□ -0.01
SNX12-201ENST00000276105 PIK3C2GO75747 1445 aa14.96□□□□□ -0.01
SNX12-201ENST00000276105 HRCP23327 699 aa14.96□□□□□ -0.01
SNX12-201ENST00000276105 POTEAQ6S8J7 498 aa14.96□□□□□ -0.01
SNX12-201ENST00000276105 LRPPRCP42704 1394 aaKnown RBP14.96□□□□□ -0.02
SNX12-201ENST00000276105 ABCC11Q96J66 1382 aa14.96□□□□□ -0.02
SNX12-201ENST00000276105 LRP6O75581 1613 aa14.95□□□□□ -0.02
SNX12-201ENST00000276105 CDC42BPGQ6DT37 1551 aa14.94□□□□□ -0.02
SNX12-201ENST00000276105 MEX3CQ5U5Q3 659 aaKnown RBP14.94□□□□□ -0.02
SNX12-201ENST00000276105 ZNF772Q68DY9 489 aaPredicted RBP14.94□□□□□ -0.02
SNX12-201ENST00000276105 KNDC1Q76NI1 1749 aa14.94□□□□□ -0.02
SNX12-201ENST00000276105 SIRT1Q96EB6 747 aa14.93□□□□□ -0.02
SNX12-201ENST00000276105 MYOM2P54296 1465 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms