RNA–Protein interactions for RNA: ENST00000264694.12

SNX25-201, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX25, Length 3,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-201ENST00000264694 MRC2Q9UBG0 1479 aa17.08■□□□□ 0.33
SNX25-201ENST00000264694 SPRYD3Q8NCJ5 442 aa17.08■□□□□ 0.32
SNX25-201ENST00000264694 RSPH6AQ9H0K4 717 aa17.08■□□□□ 0.32
SNX25-201ENST00000264694 PKNOX2Q96KN3 472 aa17.08■□□□□ 0.32
SNX25-201ENST00000264694 RRAGDQ9NQL2 400 aaPredicted RBP17.08■□□□□ 0.32
SNX25-201ENST00000264694 ATP10BO94823 1461 aa17.07■□□□□ 0.32
SNX25-201ENST00000264694 EIF3AQ14152 1382 aaKnown RBP17.07■□□□□ 0.32
SNX25-201ENST00000264694 WDR7Q9Y4E6 1490 aa17.07■□□□□ 0.32
SNX25-201ENST00000264694 BECN1Q14457 450 aa17.06■□□□□ 0.32
SNX25-201ENST00000264694 TRMT2AQ8IZ69 625 aaKnown RBP17.06■□□□□ 0.32
SNX25-201ENST00000264694 CARMIL2Q6F5E8 1435 aa17.05■□□□□ 0.32
SNX25-201ENST00000264694 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
SNX25-201ENST00000264694 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
SNX25-201ENST00000264694 CLUAP1Q96AJ1 413 aa17.04■□□□□ 0.32
SNX25-201ENST00000264694 CCDC141Q6ZP82 1450 aa17.03■□□□□ 0.32
SNX25-201ENST00000264694 E9PSI1 815 aa17.02■□□□□ 0.32
SNX25-201ENST00000264694 NEUROD2Q15784 382 aa17.02■□□□□ 0.32
SNX25-201ENST00000264694 GZF1Q9H116 711 aaPredicted RBP17.02■□□□□ 0.32
SNX25-201ENST00000264694 TNNQ9UQP3 1299 aa17.01■□□□□ 0.31
SNX25-201ENST00000264694 CENPJQ9HC77 1338 aaPredicted RBP17.01■□□□□ 0.31
SNX25-201ENST00000264694 CGNL1Q0VF96 1302 aa17■□□□□ 0.31
SNX25-201ENST00000264694 MAPK8IP3Q9UPT6 1336 aa17■□□□□ 0.31
SNX25-201ENST00000264694 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
SNX25-201ENST00000264694 ANTXR1Q9H6X2 564 aa16.99■□□□□ 0.31
SNX25-201ENST00000264694 RRP7AQ9Y3A4 280 aaKnown RBP16.99■□□□□ 0.31
SNX25-201ENST00000264694 TBC1D2Q9BYX2 928 aa16.98■□□□□ 0.31
SNX25-201ENST00000264694 ABCA8O94911 1581 aa16.98■□□□□ 0.31
SNX25-201ENST00000264694 L1TD1Q5T7N2 865 aaKnown RBP16.98■□□□□ 0.31
SNX25-201ENST00000264694 ARHGEF5Q12774 1597 aa16.98■□□□□ 0.31
SNX25-201ENST00000264694 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
SNX25-201ENST00000264694 MYO5CQ9NQX4 1742 aa16.97■□□□□ 0.31
SNX25-201ENST00000264694 LAMC1P11047 1609 aa16.97■□□□□ 0.31
SNX25-201ENST00000264694 PDE3AQ14432 1141 aa16.97■□□□□ 0.31
SNX25-201ENST00000264694 UPF2Q9HAU5 1272 aaKnown RBP16.97■□□□□ 0.31
SNX25-201ENST00000264694 ASXL1Q8IXJ9 1541 aa16.97■□□□□ 0.31
SNX25-201ENST00000264694 SYNJ2O15056 1496 aa16.97■□□□□ 0.31
SNX25-201ENST00000264694 PANK2Q9BZ23 570 aa16.97■□□□□ 0.31
SNX25-201ENST00000264694 PIK3C2GO75747 1445 aa16.96■□□□□ 0.31
SNX25-201ENST00000264694 PCDHB15Q9Y5E8 787 aa16.96■□□□□ 0.31
SNX25-201ENST00000264694 EIF2AK4Q9P2K8 1649 aaKnown RBP16.96■□□□□ 0.31
SNX25-201ENST00000264694 NLRP1Q9C000 1473 aa16.96■□□□□ 0.31
SNX25-201ENST00000264694 NUP160Q12769 1436 aa16.95■□□□□ 0.3
SNX25-201ENST00000264694 SYCP2Q9BX26 1530 aa16.95■□□□□ 0.3
SNX25-201ENST00000264694 XRCC6P12956 609 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNX25-201ENST00000264694 CDCA8Q53HL2 280 aa16.95■□□□□ 0.3
SNX25-201ENST00000264694 RLBP1P12271 317 aa16.95■□□□□ 0.3
SNX25-201ENST00000264694 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
SNX25-201ENST00000264694 PDZRN3Q9UPQ7 1066 aa16.95■□□□□ 0.3
SNX25-201ENST00000264694 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
SNX25-201ENST00000264694 TBC1D32Q96NH3 1257 aa16.94■□□□□ 0.3
SNX25-201ENST00000264694 CLASP1Q7Z460 1538 aa16.94■□□□□ 0.3
SNX25-201ENST00000264694 RSPH4AQ5TD94 716 aa16.93■□□□□ 0.3
SNX25-201ENST00000264694 NAP1L5Q96NT1 182 aaPredicted RBP16.93■□□□□ 0.3
SNX25-201ENST00000264694 GOLGA6L3A6NEY3 463 aa16.93■□□□□ 0.3
SNX25-201ENST00000264694 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
SNX25-201ENST00000264694 MCM4P33991 863 aa16.9■□□□□ 0.3
SNX25-201ENST00000264694 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
SNX25-201ENST00000264694 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
SNX25-201ENST00000264694 UNC13BO14795 1591 aa16.9■□□□□ 0.3
SNX25-201ENST00000264694 ABCC2Q92887 1545 aa16.89■□□□□ 0.29
SNX25-201ENST00000264694 ARHGAP5Q13017 1502 aa16.89■□□□□ 0.29
SNX25-201ENST00000264694 CDC42BPBQ9Y5S2 1711 aa16.89■□□□□ 0.29
SNX25-201ENST00000264694 VIRMAQ69YN4 1812 aaKnown RBP16.89■□□□□ 0.29
SNX25-201ENST00000264694 MFAP1P55081 439 aaKnown RBP16.88■□□□□ 0.29
SNX25-201ENST00000264694 SYNMO15061 1565 aa16.88■□□□□ 0.29
SNX25-201ENST00000264694 RNF17Q9BXT8 1623 aaKnown RBP16.88■□□□□ 0.29
SNX25-201ENST00000264694 SCAF11Q99590 1463 aaKnown RBP16.88■□□□□ 0.29
SNX25-201ENST00000264694 PNNQ9H307 717 aaKnown RBP16.87■□□□□ 0.29
SNX25-201ENST00000264694 IQGAP3Q86VI3 1631 aa16.86■□□□□ 0.29
SNX25-201ENST00000264694 TRAK2O60296 914 aa16.85■□□□□ 0.29
SNX25-201ENST00000264694 FSD2A1L4K1 749 aa16.85■□□□□ 0.29
SNX25-201ENST00000264694 CFAP70Q5T0N1 1121 aa16.85■□□□□ 0.29
SNX25-201ENST00000264694 TCP11L2Q8N4U5 519 aa16.85■□□□□ 0.29
SNX25-201ENST00000264694 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
SNX25-201ENST00000264694 PREX2Q70Z35 1606 aa16.84■□□□□ 0.29
SNX25-201ENST00000264694 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
SNX25-201ENST00000264694 RWDD1Q9H446 243 aaPredicted RBP16.84■□□□□ 0.29
SNX25-201ENST00000264694 MADDQ8WXG6 1647 aa16.83■□□□□ 0.29
SNX25-201ENST00000264694 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.29
SNX25-201ENST00000264694 PLEKHG5O94827 1062 aa16.83■□□□□ 0.28
SNX25-201ENST00000264694 IQGAP1P46940 1657 aa16.83■□□□□ 0.28
SNX25-201ENST00000264694 ATP10AO60312 1499 aa16.82■□□□□ 0.28
SNX25-201ENST00000264694 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
SNX25-201ENST00000264694 CHMP5Q9NZZ3 219 aa16.82■□□□□ 0.28
SNX25-201ENST00000264694 MYOM1P52179 1685 aa16.81■□□□□ 0.28
SNX25-201ENST00000264694 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
SNX25-201ENST00000264694 MAST1Q9Y2H9 1570 aa16.8■□□□□ 0.28
SNX25-201ENST00000264694 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
SNX25-201ENST00000264694 TTC37Q6PGP7 1564 aa16.8■□□□□ 0.28
SNX25-201ENST00000264694 CLCN1P35523 988 aa16.8■□□□□ 0.28
SNX25-201ENST00000264694 NGEFQ8N5V2 710 aa16.8■□□□□ 0.28
SNX25-201ENST00000264694 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
SNX25-201ENST00000264694 ZMYND15Q9H091 742 aa16.78■□□□□ 0.28
SNX25-201ENST00000264694 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
SNX25-201ENST00000264694 DUOX2Q9NRD8 1548 aa16.78■□□□□ 0.28
SNX25-201ENST00000264694 MVPQ14764 893 aaKnown RBP16.77■□□□□ 0.27
SNX25-201ENST00000264694 GRPEL1Q9HAV7 217 aa16.76■□□□□ 0.27
SNX25-201ENST00000264694 ERVK-7P63135 1459 aa16.76■□□□□ 0.27
SNX25-201ENST00000264694 POLR3AO14802 1390 aaPredicted RBP16.76■□□□□ 0.27
SNX25-201ENST00000264694 HSP90AA1P07900 732 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms