RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 TRDNQ13061 729 aa18.26■□□□□ 0.51
CCDC6-201ENST00000263102 BCL2L13Q9BXK5 485 aa18.26■□□□□ 0.51
CCDC6-201ENST00000263102 CCDC70Q6NSX1 233 aa18.26■□□□□ 0.51
CCDC6-201ENST00000263102 BECN2A8MW95 431 aa18.25■□□□□ 0.51
CCDC6-201ENST00000263102 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
CCDC6-201ENST00000263102 NLRP2Q9NX02 1062 aa18.25■□□□□ 0.51
CCDC6-201ENST00000263102 ANKRD45Q5TZF3 282 aa18.24■□□□□ 0.51
CCDC6-201ENST00000263102 PPM1FP49593 454 aaPredicted RBP18.24■□□□□ 0.51
CCDC6-201ENST00000263102 PAXIP1Q6ZW49 1069 aaPredicted RBP18.23■□□□□ 0.51
CCDC6-201ENST00000263102 NEUROD6Q96NK8 337 aa18.23■□□□□ 0.51
CCDC6-201ENST00000263102 FHAD1B1AJZ9 1412 aa18.23■□□□□ 0.51
CCDC6-201ENST00000263102 STRN4Q9NRL3 753 aa18.22■□□□□ 0.51
CCDC6-201ENST00000263102 RBM42Q9BTD8 480 aaKnown RBP18.22■□□□□ 0.51
CCDC6-201ENST00000263102 RAPGEF4Q8WZA2 1011 aa18.22■□□□□ 0.51
CCDC6-201ENST00000263102 SETQ01105 290 aaPredicted RBP18.22■□□□□ 0.51
CCDC6-201ENST00000263102 PHF14O94880 888 aa18.21■□□□□ 0.51
CCDC6-201ENST00000263102 IPO7O95373 1038 aaKnown RBP18.21■□□□□ 0.51
CCDC6-201ENST00000263102 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCDC6-201ENST00000263102 ANKRD30AQ9BXX3 1397 aa18.21■□□□□ 0.51
CCDC6-201ENST00000263102 HSP90AB2PQ58FF8 381 aa18.21■□□□□ 0.51
CCDC6-201ENST00000263102 DDX58O95786 925 aaKnown RBP18.21■□□□□ 0.51
CCDC6-201ENST00000263102 EPS15P42566 896 aa18.21■□□□□ 0.51
CCDC6-201ENST00000263102 ANKRD20A12PQ8NF67 263 aa18.21■□□□□ 0.51
CCDC6-201ENST00000263102 CEP164Q9UPV0 1460 aa18.21■□□□□ 0.5
CCDC6-201ENST00000263102 RALBP1Q15311 655 aa18.2■□□□□ 0.5
CCDC6-201ENST00000263102 WASHC4Q2M389 1173 aa18.2■□□□□ 0.5
CCDC6-201ENST00000263102 ZNF592Q92610 1267 aa18.2■□□□□ 0.5
CCDC6-201ENST00000263102 ATP2B2Q01814 1243 aa18.2■□□□□ 0.5
CCDC6-201ENST00000263102 WASHC2AQ641Q2 1341 aa18.2■□□□□ 0.5
CCDC6-201ENST00000263102 ARHGAP35Q9NRY4 1499 aa18.2■□□□□ 0.5
CCDC6-201ENST00000263102 GOLGA6L3A6NEY3 463 aa18.2■□□□□ 0.5
CCDC6-201ENST00000263102 G3BP1Q13283 466 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC6-201ENST00000263102 MPHOSPH9Q99550 1183 aa18.18■□□□□ 0.5
CCDC6-201ENST00000263102 RIC3Q7Z5B4 369 aa18.18■□□□□ 0.5
CCDC6-201ENST00000263102 RBM5P52756 815 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCDC6-201ENST00000263102 RRP12Q5JTH9 1297 aaKnown RBP18.17■□□□□ 0.5
CCDC6-201ENST00000263102 CHMP4CQ96CF2 233 aa18.17■□□□□ 0.5
CCDC6-201ENST00000263102 FAM69CQ0P6D2 419 aa18.15■□□□□ 0.5
CCDC6-201ENST00000263102 FKBP5Q13451 457 aaPredicted RBP18.14■□□□□ 0.49
CCDC6-201ENST00000263102 RUFY2Q8WXA3 655 aa18.14■□□□□ 0.49
CCDC6-201ENST00000263102 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
CCDC6-201ENST00000263102 ZKSCAN1P17029 563 aaPredicted RBP18.13■□□□□ 0.49
CCDC6-201ENST00000263102 TDRD9Q8NDG6 1382 aaKnown RBP18.13■□□□□ 0.49
CCDC6-201ENST00000263102 DEKP35659 375 aaKnown RBP18.13■□□□□ 0.49
CCDC6-201ENST00000263102 STK11IPQ8N1F8 1099 aa18.12■□□□□ 0.49
CCDC6-201ENST00000263102 MYCNP04198 464 aaPredicted RBP18.12■□□□□ 0.49
CCDC6-201ENST00000263102 CHMP4BP1P59074 171 aa18.12■□□□□ 0.49
CCDC6-201ENST00000263102 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
CCDC6-201ENST00000263102 HOOK1Q9UJC3 728 aaKnown RBP18.11■□□□□ 0.49
CCDC6-201ENST00000263102 CCDC97Q96F63 343 aaPredicted RBP18.11■□□□□ 0.49
CCDC6-201ENST00000263102 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
CCDC6-201ENST00000263102 ZNF428Q96B54 188 aa18.11■□□□□ 0.49
CCDC6-201ENST00000263102 SAFBQ15424 915 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCDC6-201ENST00000263102 WDR70Q9NW82 654 aa18.1■□□□□ 0.49
CCDC6-201ENST00000263102 SKIDA1Q1XH10 827 aa18.1■□□□□ 0.49
CCDC6-201ENST00000263102 OFD1O75665 1012 aa18.1■□□□□ 0.49
CCDC6-201ENST00000263102 KIF6Q6ZMV9 814 aa18.1■□□□□ 0.49
CCDC6-201ENST00000263102 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
CCDC6-201ENST00000263102 BCL11BQ9C0K0 894 aaPredicted RBP18.09■□□□□ 0.49
CCDC6-201ENST00000263102 BRMS1Q9HCU9 246 aa18.09■□□□□ 0.49
CCDC6-201ENST00000263102 RALYLQ86SE5 291 aaKnown RBP18.09■□□□□ 0.49
CCDC6-201ENST00000263102 VGFO15240 615 aaPredicted RBP18.08■□□□□ 0.49
CCDC6-201ENST00000263102 TSPYL4Q9UJ04 414 aa18.08■□□□□ 0.49
CCDC6-201ENST00000263102 MPHOSPH10O00566 681 aaKnown RBP18.08■□□□□ 0.48
CCDC6-201ENST00000263102 SETD5Q9C0A6 1442 aa18.08■□□□□ 0.48
CCDC6-201ENST00000263102 ATP6V1DQ9Y5K8 247 aa18.08■□□□□ 0.48
CCDC6-201ENST00000263102 CGNL1Q0VF96 1302 aa18.07■□□□□ 0.48
CCDC6-201ENST00000263102 ESCO1Q5FWF5 840 aa18.07■□□□□ 0.48
CCDC6-201ENST00000263102 HOMER1Q86YM7 354 aa18.06■□□□□ 0.48
CCDC6-201ENST00000263102 KRT18P05783 430 aaKnown RBP18.06■□□□□ 0.48
CCDC6-201ENST00000263102 VPS37CA5D8V6 355 aaPredicted RBP18.06■□□□□ 0.48
CCDC6-201ENST00000263102 CDK5RAP3Q96JB5 506 aa18.05■□□□□ 0.48
CCDC6-201ENST00000263102 GPS2Q13227 327 aa18.05■□□□□ 0.48
CCDC6-201ENST00000263102 RNF20Q5VTR2 975 aa18.05■□□□□ 0.48
CCDC6-201ENST00000263102 PANK3Q9H999 370 aa18.05■□□□□ 0.48
CCDC6-201ENST00000263102 HMOX1P09601 288 aa18.04■□□□□ 0.48
CCDC6-201ENST00000263102 ATP2B1P20020 1258 aa18.04■□□□□ 0.48
CCDC6-201ENST00000263102 TTLL5Q6EMB2 1281 aa18.04■□□□□ 0.48
CCDC6-201ENST00000263102 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
CCDC6-201ENST00000263102 RUFY1Q96T51 708 aa18.04■□□□□ 0.48
CCDC6-201ENST00000263102 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
CCDC6-201ENST00000263102 DIAPH1O60610 1272 aaKnown RBP18.03■□□□□ 0.48
CCDC6-201ENST00000263102 PDS5BQ9NTI5 1447 aa18.03■□□□□ 0.48
CCDC6-201ENST00000263102 SOGA1O94964 1423 aa18.03■□□□□ 0.48
CCDC6-201ENST00000263102 PROSER2Q86WR7 435 aaPredicted RBP18.03■□□□□ 0.48
CCDC6-201ENST00000263102 DNAJC2Q99543 621 aaKnown RBP18.03■□□□□ 0.48
CCDC6-201ENST00000263102 DDX49Q9Y6V7 483 aaKnown RBP18.03■□□□□ 0.48
CCDC6-201ENST00000263102 MATR3P43243 847 aaKnown RBP eCLIP18.02■□□□□ 0.484e-7■■■■□ 23.7
CCDC6-201ENST00000263102 ZKSCAN2Q63HK3 967 aa18.02■□□□□ 0.48
CCDC6-201ENST00000263102 ZSCAN29Q8IWY8 852 aaPredicted RBP18.02■□□□□ 0.48
CCDC6-201ENST00000263102 DDX54Q8TDD1 881 aaKnown RBP18.02■□□□□ 0.48
CCDC6-201ENST00000263102 RIPK4P57078 832 aa18.01■□□□□ 0.47
CCDC6-201ENST00000263102 SYCP1Q15431 976 aa18.01■□□□□ 0.47
CCDC6-201ENST00000263102 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
CCDC6-201ENST00000263102 TBC1D2BQ9UPU7 963 aa18.01■□□□□ 0.47
CCDC6-201ENST00000263102 BICDL1Q6ZP65 573 aa18.01■□□□□ 0.47
CCDC6-201ENST00000263102 PDILTQ8N807 584 aa18.01■□□□□ 0.47
CCDC6-201ENST00000263102 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
CCDC6-201ENST00000263102 XBP1P17861 261 aa18■□□□□ 0.47
CCDC6-201ENST00000263102 ZHX3Q9H4I2 956 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms