RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 ST18O60284 1047 aa15.82■□□□□ 0.12
TTC39A-202ENST00000262676 BECN2A8MW95 431 aa15.82■□□□□ 0.12
TTC39A-202ENST00000262676 PCMTD1Q96MG8 357 aaPredicted RBP15.82■□□□□ 0.12
TTC39A-202ENST00000262676 DDX49Q9Y6V7 483 aaKnown RBP15.82■□□□□ 0.12
TTC39A-202ENST00000262676 TPM2P07951 284 aa15.82■□□□□ 0.12
TTC39A-202ENST00000262676 FGD5Q6ZNL6 1462 aa15.82■□□□□ 0.12
TTC39A-202ENST00000262676 TPM1P09493 284 aa15.81■□□□□ 0.12
TTC39A-202ENST00000262676 SMC4Q9NTJ3 1288 aa15.81■□□□□ 0.12
TTC39A-202ENST00000262676 RAPGEF3O95398 923 aa15.8■□□□□ 0.12
TTC39A-202ENST00000262676 NECTIN2Q92692 538 aa15.8■□□□□ 0.12
TTC39A-202ENST00000262676 CTDP1Q9Y5B0 961 aaPredicted RBP15.8■□□□□ 0.12
TTC39A-202ENST00000262676 CLUAP1Q96AJ1 413 aa15.8■□□□□ 0.12
TTC39A-202ENST00000262676 NLRP2Q9NX02 1062 aa15.8■□□□□ 0.12
TTC39A-202ENST00000262676 RAD21O60216 631 aa15.8■□□□□ 0.12
TTC39A-202ENST00000262676 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
TTC39A-202ENST00000262676 KTN1Q86UP2 1357 aaKnown RBP15.79■□□□□ 0.12
TTC39A-202ENST00000262676 ELL2O00472 640 aaPredicted RBP15.79■□□□□ 0.12
TTC39A-202ENST00000262676 CCER2I3L3R5 266 aa15.79■□□□□ 0.12
TTC39A-202ENST00000262676 GSE1Q14687 1217 aa15.78■□□□□ 0.12
TTC39A-202ENST00000262676 EIF2S2P20042 333 aaKnown RBP15.78■□□□□ 0.12
TTC39A-202ENST00000262676 FAM184AQ8NB25 1140 aa15.78■□□□□ 0.12
TTC39A-202ENST00000262676 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.12
TTC39A-202ENST00000262676 APPP05067 770 aa15.77■□□□□ 0.12
TTC39A-202ENST00000262676 ZNF644Q9H582 1327 aaPredicted RBP15.77■□□□□ 0.12
TTC39A-202ENST00000262676 HOMER1Q86YM7 354 aa15.77■□□□□ 0.12
TTC39A-202ENST00000262676 RRP7AQ9Y3A4 280 aaKnown RBP15.77■□□□□ 0.12
TTC39A-202ENST00000262676 TEFQ10587 303 aa15.76■□□□□ 0.11
TTC39A-202ENST00000262676 MAP7D2Q96T17 732 aa15.76■□□□□ 0.11
TTC39A-202ENST00000262676 HMMRO75330 724 aa15.76■□□□□ 0.11
TTC39A-202ENST00000262676 MCTP1Q6DN14 999 aa15.76■□□□□ 0.11
TTC39A-202ENST00000262676 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.76■□□□□ 0.11
TTC39A-202ENST00000262676 TCEAL9Q9UHQ7 104 aa15.76■□□□□ 0.11
TTC39A-202ENST00000262676 VPS8Q8N3P4 1428 aa15.76■□□□□ 0.11
TTC39A-202ENST00000262676 NOM1Q5C9Z4 860 aaKnown RBP15.75■□□□□ 0.11
TTC39A-202ENST00000262676 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
TTC39A-202ENST00000262676 FAM177BA6PVY3 158 aa15.75■□□□□ 0.11
TTC39A-202ENST00000262676 RILPL2Q969X0 211 aa15.75■□□□□ 0.11
TTC39A-202ENST00000262676 KIF3AQ9Y496 699 aa15.75■□□□□ 0.11
TTC39A-202ENST00000262676 TRIM34Q9BYJ4 488 aa15.75■□□□□ 0.11
TTC39A-202ENST00000262676 L3MBTL2Q969R5 705 aa15.74■□□□□ 0.11
TTC39A-202ENST00000262676 RUFY1Q96T51 708 aa15.74■□□□□ 0.11
TTC39A-202ENST00000262676 TMEM132EQ6IEE7 984 aa15.74■□□□□ 0.11
TTC39A-202ENST00000262676 CCDC144AA2RUR9 1427 aa15.74■□□□□ 0.11
TTC39A-202ENST00000262676 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
TTC39A-202ENST00000262676 XPCQ01831 940 aaPredicted RBP15.73■□□□□ 0.11
TTC39A-202ENST00000262676 AK7Q96M32 723 aa15.72■□□□□ 0.11
TTC39A-202ENST00000262676 PLCD4Q9BRC7 762 aa15.72■□□□□ 0.11
TTC39A-202ENST00000262676 RAB3GAP2Q9H2M9 1393 aa15.72■□□□□ 0.11
TTC39A-202ENST00000262676 SLC26A8Q96RN1 970 aa15.71■□□□□ 0.11
TTC39A-202ENST00000262676 SKOR2Q2VWA4 1001 aaPredicted RBP15.71■□□□□ 0.11
TTC39A-202ENST00000262676 AKAP17AQ02040 695 aaKnown RBP15.71■□□□□ 0.11
TTC39A-202ENST00000262676 EVC2Q86UK5 1308 aa15.71■□□□□ 0.11
TTC39A-202ENST00000262676 IPO7O95373 1038 aaKnown RBP15.71■□□□□ 0.1
TTC39A-202ENST00000262676 RAPGEF4Q8WZA2 1011 aa15.7■□□□□ 0.1
TTC39A-202ENST00000262676 CHMP4AQ9BY43 222 aa15.7■□□□□ 0.1
TTC39A-202ENST00000262676 NAP1L1P55209 391 aaKnown RBP15.7■□□□□ 0.1
TTC39A-202ENST00000262676 RUSC2Q8N2Y8 1516 aa15.69■□□□□ 0.1
TTC39A-202ENST00000262676 NLRP6P59044 892 aa15.68■□□□□ 0.1
TTC39A-202ENST00000262676 RBM33Q96EV2 1170 aaKnown RBP15.68■□□□□ 0.1
TTC39A-202ENST00000262676 SKIDA1Q1XH10 827 aa15.68■□□□□ 0.1
TTC39A-202ENST00000262676 ABTB2Q8N961 1025 aa15.68■□□□□ 0.1
TTC39A-202ENST00000262676 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.67■□□□□ 0.1
TTC39A-202ENST00000262676 THEMISQ8N1K5 641 aaPredicted RBP15.67■□□□□ 0.1
TTC39A-202ENST00000262676 ATP6V1DQ9Y5K8 247 aa15.67■□□□□ 0.1
TTC39A-202ENST00000262676 H0YHG0 523 aa15.66■□□□□ 0.1
TTC39A-202ENST00000262676 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
TTC39A-202ENST00000262676 CENPJQ9HC77 1338 aaPredicted RBP15.66■□□□□ 0.1
TTC39A-202ENST00000262676 ARHGAP5Q13017 1502 aa15.66■□□□□ 0.1
TTC39A-202ENST00000262676 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
TTC39A-202ENST00000262676 ANKLE2Q86XL3 938 aa15.66■□□□□ 0.1
TTC39A-202ENST00000262676 MNS1Q8NEH6 495 aa15.66■□□□□ 0.1
TTC39A-202ENST00000262676 CDR1P51861 262 aa15.66■□□□□ 0.1
TTC39A-202ENST00000262676 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.66■□□□□ 0.1
TTC39A-202ENST00000262676 CABP2Q9NPB3 220 aa15.66■□□□□ 0.1
TTC39A-202ENST00000262676 ST20-MTHFSA0A0A6YYL1 179 aa15.65■□□□□ 0.1
TTC39A-202ENST00000262676 IFT57Q9NWB7 429 aa15.65■□□□□ 0.1
TTC39A-202ENST00000262676 ADAMTS2O95450 1211 aa15.65■□□□□ 0.1
TTC39A-202ENST00000262676 CCDC191Q8NCU4 936 aa15.65■□□□□ 0.1
TTC39A-202ENST00000262676 ANKRD45Q5TZF3 282 aa15.65■□□□□ 0.1
TTC39A-202ENST00000262676 RDXP35241 583 aaKnown RBP15.65■□□□□ 0.1
TTC39A-202ENST00000262676 ANKRD20A12PQ8NF67 263 aa15.64■□□□□ 0.09
TTC39A-202ENST00000262676 NOL10Q9BSC4 688 aaKnown RBP15.64■□□□□ 0.09
TTC39A-202ENST00000262676 VPS37DQ86XT2 251 aa15.64■□□□□ 0.09
TTC39A-202ENST00000262676 ARGLU1Q9NWB6 273 aaPredicted RBP15.64■□□□□ 0.09
TTC39A-202ENST00000262676 DDX54Q8TDD1 881 aaKnown RBP15.64■□□□□ 0.09
TTC39A-202ENST00000262676 FOSBP53539 338 aa15.64■□□□□ 0.09
TTC39A-202ENST00000262676 BICD2Q8TD16 824 aa15.64■□□□□ 0.09
TTC39A-202ENST00000262676 HDAC5Q9UQL6 1122 aa15.64■□□□□ 0.09
TTC39A-202ENST00000262676 SYNE3Q6ZMZ3 975 aa15.63■□□□□ 0.09
TTC39A-202ENST00000262676 ACBD3Q9H3P7 528 aa15.63■□□□□ 0.09
TTC39A-202ENST00000262676 PANK3Q9H999 370 aa15.63■□□□□ 0.09
TTC39A-202ENST00000262676 FAM43AQ8N2R8 423 aa15.63■□□□□ 0.09
TTC39A-202ENST00000262676 TRIM29Q14134 588 aa15.63■□□□□ 0.09
TTC39A-202ENST00000262676 R3HCC1Q9Y3T6 440 aaKnown RBP15.63■□□□□ 0.09
TTC39A-202ENST00000262676 HSP90B2PQ58FF3 399 aa15.63■□□□□ 0.09
TTC39A-202ENST00000262676 ZNF428Q96B54 188 aa15.63■□□□□ 0.09
TTC39A-202ENST00000262676 UACAQ9BZF9 1416 aa15.62■□□□□ 0.09
TTC39A-202ENST00000262676 GRIN2BQ13224 1484 aa15.62■□□□□ 0.09
TTC39A-202ENST00000262676 PDE4AP27815 886 aa15.62■□□□□ 0.09
TTC39A-202ENST00000262676 HSP90AB3PQ58FF7 597 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms