RNA–Protein interactions for RNA: ENST00000262101.9

MSR1-201, Transcript of macrophage scavenger receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSR1, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-201ENST00000262101 RIMS2Q9UQ26 1411 aa21.37■■□□□ 1.01
MSR1-201ENST00000262101 ZFYVE9O95405 1425 aa21.37■■□□□ 1.01
MSR1-201ENST00000262101 NPHP4O75161 1426 aaPredicted RBP21.36■■□□□ 1.01
MSR1-201ENST00000262101 MED14O60244 1454 aa21.35■■□□□ 1.01
MSR1-201ENST00000262101 PPP1R15AO75807 674 aaPredicted RBP21.34■■□□□ 1.01
MSR1-201ENST00000262101 POLR1AO95602 1720 aaPredicted RBP21.34■■□□□ 1.01
MSR1-201ENST00000262101 BCANQ96GW7 911 aa21.34■■□□□ 1.01
MSR1-201ENST00000262101 SLC26A8Q96RN1 970 aa21.34■■□□□ 1.01
MSR1-201ENST00000262101 ZNF335Q9H4Z2 1342 aaPredicted RBP21.33■■□□□ 1
MSR1-201ENST00000262101 HDGFP51858 240 aaKnown RBP21.32■■□□□ 1
MSR1-201ENST00000262101 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.31■■□□□ 1
MSR1-201ENST00000262101 DHX57Q6P158 1386 aaKnown RBP21.3■■□□□ 1
MSR1-201ENST00000262101 KIF1BO60333 1816 aa21.3■■□□□ 1
MSR1-201ENST00000262101 SPATA31E1Q6ZUB1 1445 aa21.29■■□□□ 1
MSR1-201ENST00000262101 IQGAP1P46940 1657 aa21.28■■□□□ 1
MSR1-201ENST00000262101 SIN3AQ96ST3 1273 aa21.26■□□□□ 0.99
MSR1-201ENST00000262101 PLEKHG1Q9ULL1 1385 aa21.26■□□□□ 0.99
MSR1-201ENST00000262101 NEXMIFQ5QGS0 1516 aa21.25■□□□□ 0.99
MSR1-201ENST00000262101 RPGRIP1LQ68CZ1 1315 aa21.24■□□□□ 0.99
MSR1-201ENST00000262101 VGFO15240 615 aaPredicted RBP21.23■□□□□ 0.99
MSR1-201ENST00000262101 ADGRF5Q8IZF2 1346 aa21.22■□□□□ 0.99
MSR1-201ENST00000262101 NEUROD1Q13562 356 aa21.21■□□□□ 0.99
MSR1-201ENST00000262101 ADAMTS13Q76LX8 1427 aa21.21■□□□□ 0.99
MSR1-201ENST00000262101 KDM2AQ9Y2K7 1162 aa21.19■□□□□ 0.98
MSR1-201ENST00000262101 TBX22Q9Y458 520 aa21.19■□□□□ 0.98
MSR1-201ENST00000262101 LTBP4Q8N2S1 1624 aa21.18■□□□□ 0.98
MSR1-201ENST00000262101 DCAF11Q8TEB1 546 aa21.18■□□□□ 0.98
MSR1-201ENST00000262101 CERKQ8TCT0 537 aa21.17■□□□□ 0.98
MSR1-201ENST00000262101 RBM33Q96EV2 1170 aaKnown RBP21.16■□□□□ 0.98
MSR1-201ENST00000262101 PPLO60437 1756 aa21.15■□□□□ 0.98
MSR1-201ENST00000262101 KCNA6P17658 529 aa21.14■□□□□ 0.97
MSR1-201ENST00000262101 NRXN3Q9Y4C0 1643 aa21.14■□□□□ 0.97
MSR1-201ENST00000262101 METP08581 1390 aa21.14■□□□□ 0.97
MSR1-201ENST00000262101 STRCP1A6NGW2 1772 aa21.14■□□□□ 0.97
MSR1-201ENST00000262101 SETBP1Q9Y6X0 1596 aa21.11■□□□□ 0.97
MSR1-201ENST00000262101 AMOTL2Q9Y2J4 779 aa21.1■□□□□ 0.97
MSR1-201ENST00000262101 IFT172Q9UG01 1749 aa21.1■□□□□ 0.97
MSR1-201ENST00000262101 L3MBTL2Q969R5 705 aa21.1■□□□□ 0.97
MSR1-201ENST00000262101 PTPRUQ92729 1446 aa21.09■□□□□ 0.97
MSR1-201ENST00000262101 CFAP70Q5T0N1 1121 aa21.08■□□□□ 0.97
MSR1-201ENST00000262101 TMEM132EQ6IEE7 984 aa21.08■□□□□ 0.97
MSR1-201ENST00000262101 ALKQ9UM73 1620 aa21.07■□□□□ 0.96
MSR1-201ENST00000262101 PROSER2Q86WR7 435 aaPredicted RBP21.07■□□□□ 0.96
MSR1-201ENST00000262101 PIK3C2GO75747 1445 aa21.07■□□□□ 0.96
MSR1-201ENST00000262101 LRRC7Q96NW7 1537 aa21.05■□□□□ 0.96
MSR1-201ENST00000262101 C14orf93Q9H972 538 aaKnown RBP21.05■□□□□ 0.96
MSR1-201ENST00000262101 CPS1P31327 1500 aa21.04■□□□□ 0.96
MSR1-201ENST00000262101 DIP2AQ14689 1571 aa21.04■□□□□ 0.96
MSR1-201ENST00000262101 CHD2O14647 1828 aaKnown RBP21.04■□□□□ 0.96
MSR1-201ENST00000262101 MYOM2P54296 1465 aa21.04■□□□□ 0.96
MSR1-201ENST00000262101 NRXN1Q9ULB1 1477 aa21.04■□□□□ 0.96
MSR1-201ENST00000262101 PIK3R4Q99570 1358 aa21.04■□□□□ 0.96
MSR1-201ENST00000262101 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
MSR1-201ENST00000262101 STK26Q9P289 416 aa21.02■□□□□ 0.96
MSR1-201ENST00000262101 TMEM94Q12767 1356 aa21.02■□□□□ 0.96
MSR1-201ENST00000262101 SETD1AO15047 1707 aaKnown RBP21■□□□□ 0.95
MSR1-201ENST00000262101 STAC3Q96MF2 364 aa21■□□□□ 0.95
MSR1-201ENST00000262101 NWD1Q149M9 1564 aa20.99■□□□□ 0.95
MSR1-201ENST00000262101 ASXL1Q8IXJ9 1541 aa20.96■□□□□ 0.95
MSR1-201ENST00000262101 NKTRP30414 1462 aaKnown RBP20.96■□□□□ 0.95
MSR1-201ENST00000262101 ROBO2Q9HCK4 1378 aa20.95■□□□□ 0.94
MSR1-201ENST00000262101 UBAP1LF5GYI3 381 aa20.95■□□□□ 0.94
MSR1-201ENST00000262101 NBPF1Q3BBV0 1214 aa20.95■□□□□ 0.94
MSR1-201ENST00000262101 TONSLQ96HA7 1378 aa20.95■□□□□ 0.94
MSR1-201ENST00000262101 XIRP1Q702N8 1843 aaKnown RBP20.94■□□□□ 0.94
MSR1-201ENST00000262101 WAPLQ7Z5K2 1190 aa20.94■□□□□ 0.94
MSR1-201ENST00000262101 PRAG1Q86YV5 1406 aa20.94■□□□□ 0.94
MSR1-201ENST00000262101 C14orf37Q86TY3 774 aa20.93■□□□□ 0.94
MSR1-201ENST00000262101 FBXO41Q8TF61 875 aa20.93■□□□□ 0.94
MSR1-201ENST00000262101 NBPF8Q3BBV2 869 aa20.93■□□□□ 0.94
MSR1-201ENST00000262101 XRN1Q8IZH2 1706 aaKnown RBP20.93■□□□□ 0.94
MSR1-201ENST00000262101 ILDR1Q86SU0 546 aaPredicted RBP20.92■□□□□ 0.94
MSR1-201ENST00000262101 YTHDC2Q9H6S0 1430 aaKnown RBP20.92■□□□□ 0.94
MSR1-201ENST00000262101 IQSEC2Q5JU85 1478 aa20.92■□□□□ 0.94
MSR1-201ENST00000262101 LRPPRCP42704 1394 aaKnown RBP20.91■□□□□ 0.94
MSR1-201ENST00000262101 TRAK1Q9UPV9 953 aa20.91■□□□□ 0.94
MSR1-201ENST00000262101 CLSPNQ9HAW4 1339 aa20.91■□□□□ 0.94
MSR1-201ENST00000262101 PIP4K2BP78356 416 aa20.9■□□□□ 0.94
MSR1-201ENST00000262101 ABCC11Q96J66 1382 aa20.9■□□□□ 0.94
MSR1-201ENST00000262101 ADGRB1O14514 1584 aa20.89■□□□□ 0.93
MSR1-201ENST00000262101 TOM1O60784 492 aa20.89■□□□□ 0.93
MSR1-201ENST00000262101 PLEKHH1Q9ULM0 1364 aa20.89■□□□□ 0.93
MSR1-201ENST00000262101 C19orf44Q9H6X5 657 aa20.88■□□□□ 0.93
MSR1-201ENST00000262101 SAFB2Q14151 953 aaKnown RBP eCLIP20.87■□□□□ 0.93
MSR1-201ENST00000262101 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
MSR1-201ENST00000262101 MSH6P52701 1360 aa20.86■□□□□ 0.93
MSR1-201ENST00000262101 PTCH1Q13635 1447 aa20.86■□□□□ 0.93
MSR1-201ENST00000262101 LAMC1P11047 1609 aa20.85■□□□□ 0.93
MSR1-201ENST00000262101 PRAM1Q96QH2 718 aa20.85■□□□□ 0.93
MSR1-201ENST00000262101 TECPR2O15040 1411 aa20.85■□□□□ 0.93
MSR1-201ENST00000262101 NCOA3Q9Y6Q9 1424 aa20.85■□□□□ 0.93
MSR1-201ENST00000262101 ATF3P18847 181 aa20.82■□□□□ 0.92
MSR1-201ENST00000262101 SLAIN2Q9P270 581 aa20.82■□□□□ 0.92
MSR1-201ENST00000262101 SIRT1Q96EB6 747 aa20.81■□□□□ 0.92
MSR1-201ENST00000262101 POGKQ9P215 609 aa20.81■□□□□ 0.92
MSR1-201ENST00000262101 CADPS2Q86UW7 1296 aa20.8■□□□□ 0.92
MSR1-201ENST00000262101 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.79■□□□□ 0.92
MSR1-201ENST00000262101 ADGRL3Q9HAR2 1447 aa20.79■□□□□ 0.92
MSR1-201ENST00000262101 ROCK2O75116 1388 aaKnown RBP20.79■□□□□ 0.92
MSR1-201ENST00000262101 FAM135BQ49AJ0 1406 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 289.1 ms