RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 PIP4K2BP78356 416 aa14.11□□□□□ -0.15
LIN7A-201ENST00000261203 RRBP1Q9P2E9 1410 aaKnown RBP14.11□□□□□ -0.15
LIN7A-201ENST00000261203 LRRC7Q96NW7 1537 aa14.1□□□□□ -0.15
LIN7A-201ENST00000261203 TMEM131LA2VDJ0 1609 aa14.08□□□□□ -0.15
LIN7A-201ENST00000261203 NUP155O75694 1391 aa14.08□□□□□ -0.16
LIN7A-201ENST00000261203 XIRP1Q702N8 1843 aaKnown RBP14.06□□□□□ -0.16
LIN7A-201ENST00000261203 ALKQ9UM73 1620 aa14.06□□□□□ -0.16
LIN7A-201ENST00000261203 HDGFP51858 240 aaKnown RBP14.06□□□□□ -0.16
LIN7A-201ENST00000261203 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
LIN7A-201ENST00000261203 MED1Q15648 1581 aaPredicted RBP14.05□□□□□ -0.16
LIN7A-201ENST00000261203 ZFYVE9O95405 1425 aa14.05□□□□□ -0.16
LIN7A-201ENST00000261203 SPHKAPQ2M3C7 1700 aa14.04□□□□□ -0.16
LIN7A-201ENST00000261203 PLEKHG1Q9ULL1 1385 aa14.03□□□□□ -0.16
LIN7A-201ENST00000261203 RIMS2Q9UQ26 1411 aa14.03□□□□□ -0.16
LIN7A-201ENST00000261203 NWD1Q149M9 1564 aa14.03□□□□□ -0.16
LIN7A-201ENST00000261203 KCNA6P17658 529 aa14.02□□□□□ -0.17
LIN7A-201ENST00000261203 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.02□□□□□ -0.17
LIN7A-201ENST00000261203 NKTRP30414 1462 aaKnown RBP14.01□□□□□ -0.17
LIN7A-201ENST00000261203 NAIPQ13075 1403 aa14.01□□□□□ -0.17
LIN7A-201ENST00000261203 PPP1R15AO75807 674 aaPredicted RBP14.01□□□□□ -0.17
LIN7A-201ENST00000261203 BCANQ96GW7 911 aa14.01□□□□□ -0.17
LIN7A-201ENST00000261203 SLC26A8Q96RN1 970 aa14.01□□□□□ -0.17
LIN7A-201ENST00000261203 RGS17Q9UGC6 210 aaPredicted RBP14.01□□□□□ -0.17
LIN7A-201ENST00000261203 CHD2O14647 1828 aaKnown RBP14.01□□□□□ -0.17
LIN7A-201ENST00000261203 CHGAP10645 457 aaKnown RBP14□□□□□ -0.17
LIN7A-201ENST00000261203 DIP2AQ14689 1571 aa13.99□□□□□ -0.17
LIN7A-201ENST00000261203 HFM1A2PYH4 1435 aa13.98□□□□□ -0.17
LIN7A-201ENST00000261203 TMEM94Q12767 1356 aa13.97□□□□□ -0.17
LIN7A-201ENST00000261203 PROSER2Q86WR7 435 aaPredicted RBP13.96□□□□□ -0.17
LIN7A-201ENST00000261203 TBX22Q9Y458 520 aa13.96□□□□□ -0.17
LIN7A-201ENST00000261203 KIF1BO60333 1816 aa13.96□□□□□ -0.17
LIN7A-201ENST00000261203 TRPM2O94759 1503 aa13.95□□□□□ -0.18
LIN7A-201ENST00000261203 PIK3R4Q99570 1358 aa13.94□□□□□ -0.18
LIN7A-201ENST00000261203 CLTCL1P53675 1640 aa13.93□□□□□ -0.18
LIN7A-201ENST00000261203 ADAMTS13Q76LX8 1427 aa13.93□□□□□ -0.18
LIN7A-201ENST00000261203 FAM135BQ49AJ0 1406 aa13.92□□□□□ -0.18
LIN7A-201ENST00000261203 NUTM2DQ5VT03 806 aaPredicted RBP13.92□□□□□ -0.18
LIN7A-201ENST00000261203 MSH6P52701 1360 aa13.92□□□□□ -0.18
LIN7A-201ENST00000261203 NCOA3Q9Y6Q9 1424 aa13.91□□□□□ -0.18
LIN7A-201ENST00000261203 TRIM52Q96A61 297 aa13.91□□□□□ -0.18
LIN7A-201ENST00000261203 SETBP1Q9Y6X0 1596 aa13.91□□□□□ -0.18
LIN7A-201ENST00000261203 ROBO1Q9Y6N7 1651 aa13.91□□□□□ -0.18
LIN7A-201ENST00000261203 ZNF326Q5BKZ1 582 aaKnown RBP13.9□□□□□ -0.18
LIN7A-201ENST00000261203 NRXN3Q9Y4C0 1643 aa13.9□□□□□ -0.19
LIN7A-201ENST00000261203 RBM33Q96EV2 1170 aaKnown RBP13.88□□□□□ -0.19
LIN7A-201ENST00000261203 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
LIN7A-201ENST00000261203 NEXMIFQ5QGS0 1516 aa13.88□□□□□ -0.19
LIN7A-201ENST00000261203 POTEAQ6S8J7 498 aa13.87□□□□□ -0.19
LIN7A-201ENST00000261203 XRN1Q8IZH2 1706 aaKnown RBP13.87□□□□□ -0.19
LIN7A-201ENST00000261203 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.86□□□□□ -0.19
LIN7A-201ENST00000261203 ACIN1Q9UKV3 1341 aaKnown RBP13.86□□□□□ -0.19
LIN7A-201ENST00000261203 C14orf37Q86TY3 774 aa13.85□□□□□ -0.19
LIN7A-201ENST00000261203 SLAIN2Q9P270 581 aa13.85□□□□□ -0.19
LIN7A-201ENST00000261203 AMOTL2Q9Y2J4 779 aa13.85□□□□□ -0.19
LIN7A-201ENST00000261203 PTPRUQ92729 1446 aa13.84□□□□□ -0.19
LIN7A-201ENST00000261203 PPLO60437 1756 aa13.83□□□□□ -0.19
LIN7A-201ENST00000261203 C19orf44Q9H6X5 657 aa13.83□□□□□ -0.2
LIN7A-201ENST00000261203 PHLPP1O60346 1717 aa13.83□□□□□ -0.2
LIN7A-201ENST00000261203 RPGRIP1LQ68CZ1 1315 aa13.83□□□□□ -0.2
LIN7A-201ENST00000261203 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
LIN7A-201ENST00000261203 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
LIN7A-201ENST00000261203 DCCP43146 1447 aa13.81□□□□□ -0.2
LIN7A-201ENST00000261203 ATF3P18847 181 aa13.81□□□□□ -0.2
LIN7A-201ENST00000261203 METP08581 1390 aa13.81□□□□□ -0.2
LIN7A-201ENST00000261203 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
LIN7A-201ENST00000261203 CCDC144AA2RUR9 1427 aa13.8□□□□□ -0.2
LIN7A-201ENST00000261203 MPHOSPH9Q99550 1183 aa13.78□□□□□ -0.2
LIN7A-201ENST00000261203 SETD5Q9C0A6 1442 aa13.78□□□□□ -0.2
LIN7A-201ENST00000261203 COL16A1Q07092 1604 aaPredicted RBP13.77□□□□□ -0.21
LIN7A-201ENST00000261203 AHDC1Q5TGY3 1603 aaPredicted RBP13.77□□□□□ -0.21
LIN7A-201ENST00000261203 NALCNQ8IZF0 1738 aa13.76□□□□□ -0.21
LIN7A-201ENST00000261203 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
LIN7A-201ENST00000261203 PTCH1Q13635 1447 aa13.76□□□□□ -0.21
LIN7A-201ENST00000261203 ADGRL3Q9HAR2 1447 aa13.76□□□□□ -0.21
LIN7A-201ENST00000261203 PRAG1Q86YV5 1406 aa13.75□□□□□ -0.21
LIN7A-201ENST00000261203 JCADQ9P266 1359 aa13.75□□□□□ -0.21
LIN7A-201ENST00000261203 SPATA31E1Q6ZUB1 1445 aa13.74□□□□□ -0.21
LIN7A-201ENST00000261203 ANKRD30BQ9BXX2 1392 aa13.73□□□□□ -0.21
LIN7A-201ENST00000261203 MST1RQ04912 1400 aa13.73□□□□□ -0.21
LIN7A-201ENST00000261203 SHPRHQ149N8 1683 aa13.72□□□□□ -0.21
LIN7A-201ENST00000261203 BRINP3Q76B58 766 aa13.72□□□□□ -0.21
LIN7A-201ENST00000261203 ASXL1Q8IXJ9 1541 aa13.72□□□□□ -0.21
LIN7A-201ENST00000261203 NHSL1Q5SYE7 1610 aa13.72□□□□□ -0.21
LIN7A-201ENST00000261203 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.21
LIN7A-201ENST00000261203 RGL3Q3MIN7 710 aa13.71□□□□□ -0.21
LIN7A-201ENST00000261203 ROBO2Q9HCK4 1378 aa13.7□□□□□ -0.22
LIN7A-201ENST00000261203 SPATA31A6Q5VVP1 1343 aa13.69□□□□□ -0.22
LIN7A-201ENST00000261203 ADGRF5Q8IZF2 1346 aa13.68□□□□□ -0.22
LIN7A-201ENST00000261203 KNDC1Q76NI1 1749 aa13.68□□□□□ -0.22
LIN7A-201ENST00000261203 PIK3C2GO75747 1445 aa13.67□□□□□ -0.22
LIN7A-201ENST00000261203 UPF1Q92900 1129 aaKnown RBP eCLIP13.67□□□□□ -0.22
LIN7A-201ENST00000261203 LAMC1P11047 1609 aa13.67□□□□□ -0.22
LIN7A-201ENST00000261203 TECPR2O15040 1411 aa13.66□□□□□ -0.22
LIN7A-201ENST00000261203 C1orf167Q5SNV9 1468 aa13.66□□□□□ -0.22
LIN7A-201ENST00000261203 CDC42BPGQ6DT37 1551 aa13.66□□□□□ -0.22
LIN7A-201ENST00000261203 HRCP23327 699 aa13.65□□□□□ -0.22
LIN7A-201ENST00000261203 MYOM2P54296 1465 aa13.65□□□□□ -0.22
LIN7A-201ENST00000261203 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
LIN7A-201ENST00000261203 LRPPRCP42704 1394 aaKnown RBP13.64□□□□□ -0.23
LIN7A-201ENST00000261203 LRRC59Q96AG4 307 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms