RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 ZNF330Q9Y3S2 320 aaPredicted RBP19.51■□□□□ 0.71
SHTN1-201ENST00000260777 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
SHTN1-201ENST00000260777 MINK1Q8N4C8 1332 aaPredicted RBP19.49■□□□□ 0.71
SHTN1-201ENST00000260777 LTV1Q96GA3 475 aaPredicted RBP19.48■□□□□ 0.71
SHTN1-201ENST00000260777 NFKBIBQ15653 356 aa19.48■□□□□ 0.71
SHTN1-201ENST00000260777 ADAMTS8Q9UP79 889 aa19.47■□□□□ 0.71
SHTN1-201ENST00000260777 EHBP1L1Q8N3D4 1523 aa19.47■□□□□ 0.71
SHTN1-201ENST00000260777 PRDM2Q13029 1718 aa19.47■□□□□ 0.71
SHTN1-201ENST00000260777 C22orf23Q9BZE7 217 aa19.47■□□□□ 0.71
SHTN1-201ENST00000260777 HFM1A2PYH4 1435 aa19.47■□□□□ 0.71
SHTN1-201ENST00000260777 RUFY2Q8WXA3 655 aa19.46■□□□□ 0.71
SHTN1-201ENST00000260777 H3BQV1 296 aa19.45■□□□□ 0.7
SHTN1-201ENST00000260777 GNAI1P63096 354 aa19.45■□□□□ 0.7
SHTN1-201ENST00000260777 SF3A1Q15459 793 aaKnown RBP19.45■□□□□ 0.7
SHTN1-201ENST00000260777 IFFO2Q5TF58 517 aa19.45■□□□□ 0.7
SHTN1-201ENST00000260777 TRHP20396 242 aaPredicted RBP19.45■□□□□ 0.7
SHTN1-201ENST00000260777 CFTRP13569 1480 aa19.45■□□□□ 0.7
SHTN1-201ENST00000260777 DIAPH3Q9NSV4 1193 aa19.45■□□□□ 0.7
SHTN1-201ENST00000260777 NUCB2P80303 420 aa19.44■□□□□ 0.7
SHTN1-201ENST00000260777 INTS3Q68E01 1043 aaKnown RBP19.44■□□□□ 0.7
SHTN1-201ENST00000260777 TIAM1Q13009 1591 aa19.44■□□□□ 0.7
SHTN1-201ENST00000260777 NUTM2FA1L443 756 aa19.44■□□□□ 0.7
SHTN1-201ENST00000260777 PANK1Q8TE04 598 aa19.44■□□□□ 0.7
SHTN1-201ENST00000260777 TOP2BQ02880 1626 aa19.44■□□□□ 0.7
SHTN1-201ENST00000260777 ISY1Q9ULR0 285 aaKnown RBP19.43■□□□□ 0.7
SHTN1-201ENST00000260777 FAM184AQ8NB25 1140 aa19.43■□□□□ 0.7
SHTN1-201ENST00000260777 KIAA1107Q9UPP5 1409 aa19.41■□□□□ 0.7
SHTN1-201ENST00000260777 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
SHTN1-201ENST00000260777 CDCA7LQ96GN5 454 aa19.41■□□□□ 0.7
SHTN1-201ENST00000260777 SMG6Q86US8 1419 aaKnown RBP19.41■□□□□ 0.7
SHTN1-201ENST00000260777 GOLGA6L19H0YKK7 550 aa19.41■□□□□ 0.7
SHTN1-201ENST00000260777 ZKSCAN1P17029 563 aaPredicted RBP19.4■□□□□ 0.7
SHTN1-201ENST00000260777 C1orf141Q5JVX7 400 aa19.4■□□□□ 0.7
SHTN1-201ENST00000260777 LNPKQ9C0E8 428 aa19.4■□□□□ 0.7
SHTN1-201ENST00000260777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.4■□□□□ 0.7
SHTN1-201ENST00000260777 TEFQ10587 303 aa19.39■□□□□ 0.69
SHTN1-201ENST00000260777 SCAPERQ9BY12 1400 aa19.38■□□□□ 0.69
SHTN1-201ENST00000260777 BECN2A8MW95 431 aa19.38■□□□□ 0.69
SHTN1-201ENST00000260777 FOXD4L6Q3SYB3 417 aaPredicted RBP19.38■□□□□ 0.69
SHTN1-201ENST00000260777 FOXD4L3Q6VB84 417 aaPredicted RBP19.38■□□□□ 0.69
SHTN1-201ENST00000260777 PDE3AQ14432 1141 aa19.37■□□□□ 0.69
SHTN1-201ENST00000260777 GOLGA6L1Q8N7Z2 621 aa19.37■□□□□ 0.69
SHTN1-201ENST00000260777 CDC45O75419 566 aa19.37■□□□□ 0.69
SHTN1-201ENST00000260777 AQRO60306 1485 aaKnown RBP eCLIP19.37■□□□□ 0.694e-9■□□□□ 8.9
SHTN1-201ENST00000260777 NBPF8Q3BBV2 869 aa19.37■□□□□ 0.69
SHTN1-201ENST00000260777 AKNAQ7Z591 1439 aa19.37■□□□□ 0.69
SHTN1-201ENST00000260777 PNISRQ8TF01 805 aaKnown RBP19.37■□□□□ 0.69
SHTN1-201ENST00000260777 GRIN2BQ13224 1484 aa19.36■□□□□ 0.69
SHTN1-201ENST00000260777 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
SHTN1-201ENST00000260777 MRE11P49959 708 aa19.36■□□□□ 0.69
SHTN1-201ENST00000260777 NEXNQ0ZGT2 675 aa19.36■□□□□ 0.69
SHTN1-201ENST00000260777 LRRFIP1Q32MZ4 808 aaKnown RBP19.36■□□□□ 0.69
SHTN1-201ENST00000260777 ANO2Q9NQ90 1003 aa19.36■□□□□ 0.69
SHTN1-201ENST00000260777 C9orf78Q9NZ63 289 aaPredicted RBP19.35■□□□□ 0.69
SHTN1-201ENST00000260777 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.35■□□□□ 0.69
SHTN1-201ENST00000260777 TCP11L2Q8N4U5 519 aa19.35■□□□□ 0.69
SHTN1-201ENST00000260777 RASSF8Q8NHQ8 419 aa19.35■□□□□ 0.69
SHTN1-201ENST00000260777 TPM3P06753 285 aa19.34■□□□□ 0.69
SHTN1-201ENST00000260777 IFIT2P09913 472 aaKnown RBP19.34■□□□□ 0.69
SHTN1-201ENST00000260777 NINLQ9Y2I6 1382 aa19.34■□□□□ 0.69
SHTN1-201ENST00000260777 TOMM22Q9NS69 142 aa19.34■□□□□ 0.69
SHTN1-201ENST00000260777 FKBP5Q13451 457 aaPredicted RBP19.33■□□□□ 0.69
SHTN1-201ENST00000260777 HSP90AB4PQ58FF6 505 aa19.33■□□□□ 0.68
SHTN1-201ENST00000260777 RNF20Q5VTR2 975 aa19.33■□□□□ 0.68
SHTN1-201ENST00000260777 MTHFSP49914 203 aa19.33■□□□□ 0.68
SHTN1-201ENST00000260777 ARHGAP5Q13017 1502 aa19.33■□□□□ 0.68
SHTN1-201ENST00000260777 CLSTN1O94985 981 aa19.32■□□□□ 0.68
SHTN1-201ENST00000260777 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.32■□□□□ 0.68
SHTN1-201ENST00000260777 MCTP1Q6DN14 999 aa19.32■□□□□ 0.68
SHTN1-201ENST00000260777 BACH2Q9BYV9 841 aa19.32■□□□□ 0.68
SHTN1-201ENST00000260777 GGNBP2Q9H3C7 697 aa19.32■□□□□ 0.68
SHTN1-201ENST00000260777 EIF2S2P20042 333 aaKnown RBP19.32■□□□□ 0.68
SHTN1-201ENST00000260777 FAM43AQ8N2R8 423 aa19.32■□□□□ 0.68
SHTN1-201ENST00000260777 NOC3LQ8WTT2 800 aaKnown RBP19.32■□□□□ 0.68
SHTN1-201ENST00000260777 HECW1Q76N89 1606 aa19.31■□□□□ 0.68
SHTN1-201ENST00000260777 TNNT3P45378 269 aaPredicted RBP19.31■□□□□ 0.68
SHTN1-201ENST00000260777 C9orf84Q5VXU9 1444 aa19.3■□□□□ 0.68
SHTN1-201ENST00000260777 TSPYL4Q9UJ04 414 aa19.3■□□□□ 0.68
SHTN1-201ENST00000260777 PDZRN3Q9UPQ7 1066 aa19.3■□□□□ 0.68
SHTN1-201ENST00000260777 SMC3Q9UQE7 1217 aa19.3■□□□□ 0.68
SHTN1-201ENST00000260777 DDX58O95786 925 aaKnown RBP19.3■□□□□ 0.68
SHTN1-201ENST00000260777 SYNJ2O15056 1496 aa19.3■□□□□ 0.68
SHTN1-201ENST00000260777 HMOX1P09601 288 aa19.29■□□□□ 0.68
SHTN1-201ENST00000260777 CPLX2Q6PUV4 134 aaKnown RBP19.29■□□□□ 0.68
SHTN1-201ENST00000260777 NBPF1Q3BBV0 1214 aa19.29■□□□□ 0.68
SHTN1-201ENST00000260777 CABP2Q9NPB3 220 aa19.29■□□□□ 0.68
SHTN1-201ENST00000260777 SUPT6HQ7KZ85 1726 aaKnown RBP19.28■□□□□ 0.68
SHTN1-201ENST00000260777 ERC2O15083 957 aa19.28■□□□□ 0.68
SHTN1-201ENST00000260777 AMER1Q5JTC6 1135 aaPredicted RBP19.27■□□□□ 0.68
SHTN1-201ENST00000260777 CREBRFQ8IUR6 639 aa19.27■□□□□ 0.68
SHTN1-201ENST00000260777 DAPK1P53355 1430 aa19.27■□□□□ 0.68
SHTN1-201ENST00000260777 G3BP1Q13283 466 aaKnown RBP eCLIP19.27■□□□□ 0.68
SHTN1-201ENST00000260777 TRAK2O60296 914 aa19.27■□□□□ 0.68
SHTN1-201ENST00000260777 CFAP70Q5T0N1 1121 aa19.27■□□□□ 0.67
SHTN1-201ENST00000260777 TTC5Q8N0Z6 440 aa19.27■□□□□ 0.67
SHTN1-201ENST00000260777 TPD52L1Q16890 204 aaPredicted RBP19.26■□□□□ 0.67
SHTN1-201ENST00000260777 SYNE3Q6ZMZ3 975 aa19.26■□□□□ 0.67
SHTN1-201ENST00000260777 BICD2Q8TD16 824 aa19.26■□□□□ 0.67
SHTN1-201ENST00000260777 NECTIN2Q92692 538 aa19.26■□□□□ 0.67
SHTN1-201ENST00000260777 TROQ12816 1431 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms