RNA–Protein interactions for RNA: ENST00000256078.8

KRAS-201, Transcript of KRAS proto-oncogene, GTPase, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KRAS, Length 1,119 nt, Biotype protein coding, Subcellular localisation Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRAS-201ENST00000256078 NWD1Q149M9 1564 aa29.37■■■□□ 2.29
KRAS-201ENST00000256078 RIMS2Q9UQ26 1411 aa29.35■■■□□ 2.29
KRAS-201ENST00000256078 SLC26A8Q96RN1 970 aa29.34■■■□□ 2.29
KRAS-201ENST00000256078 ITGAEP38570 1179 aa29.33■■■□□ 2.29
KRAS-201ENST00000256078 NKTRP30414 1462 aaKnown RBP29.32■■■□□ 2.28
KRAS-201ENST00000256078 SCAF1Q9H7N4 1312 aaKnown RBP29.31■■■□□ 2.28
KRAS-201ENST00000256078 MYO5BQ9ULV0 1848 aa29.31■■■□□ 2.28
KRAS-201ENST00000256078 TMEM94Q12767 1356 aa29.3■■■□□ 2.28
KRAS-201ENST00000256078 NAIPQ13075 1403 aa29.29■■■□□ 2.28
KRAS-201ENST00000256078 HDGFP51858 240 aaKnown RBP29.26■■■□□ 2.27
KRAS-201ENST00000256078 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.25■■■□□ 2.27
KRAS-201ENST00000256078 ADAMTS13Q76LX8 1427 aa29.25■■■□□ 2.27
KRAS-201ENST00000256078 TBX22Q9Y458 520 aa29.24■■■□□ 2.27
KRAS-201ENST00000256078 FAM135BQ49AJ0 1406 aa29.23■■■□□ 2.27
KRAS-201ENST00000256078 MED1Q15648 1581 aaPredicted RBP29.22■■■□□ 2.27
KRAS-201ENST00000256078 HFM1A2PYH4 1435 aa29.2■■■□□ 2.27
KRAS-201ENST00000256078 DIP2AQ14689 1571 aa29.2■■■□□ 2.26
KRAS-201ENST00000256078 CHD2O14647 1828 aaKnown RBP29.19■■■□□ 2.26
KRAS-201ENST00000256078 PIK3R4Q99570 1358 aa29.18■■■□□ 2.26
KRAS-201ENST00000256078 PROSER2Q86WR7 435 aaPredicted RBP29.18■■■□□ 2.26
KRAS-201ENST00000256078 SPHKAPQ2M3C7 1700 aa29.17■■■□□ 2.26
KRAS-201ENST00000256078 SOCS7O14512 581 aa29.17■■■□□ 2.26
KRAS-201ENST00000256078 PPP1R15AO75807 674 aaPredicted RBP29.17■■■□□ 2.26
KRAS-201ENST00000256078 NCOA3Q9Y6Q9 1424 aa29.16■■■□□ 2.26
KRAS-201ENST00000256078 TRPM2O94759 1503 aa29.15■■■□□ 2.26
KRAS-201ENST00000256078 CHGAP10645 457 aaKnown RBP29.13■■■□□ 2.25
KRAS-201ENST00000256078 RBM33Q96EV2 1170 aaKnown RBP29.11■■■□□ 2.25
KRAS-201ENST00000256078 BCANQ96GW7 911 aa29.11■■■□□ 2.25
KRAS-201ENST00000256078 SETBP1Q9Y6X0 1596 aa29.1■■■□□ 2.25
KRAS-201ENST00000256078 NRXN3Q9Y4C0 1643 aa29.09■■■□□ 2.25
KRAS-201ENST00000256078 NUTM2DQ5VT03 806 aaPredicted RBP29.08■■■□□ 2.25
KRAS-201ENST00000256078 MSH6P52701 1360 aa29.08■■■□□ 2.25
KRAS-201ENST00000256078 CLTCL1P53675 1640 aa29.08■■■□□ 2.25
KRAS-201ENST00000256078 PTPRUQ92729 1446 aa29.07■■■□□ 2.24
KRAS-201ENST00000256078 SENP3Q9H4L4 574 aaPredicted RBP29.05■■■□□ 2.24
KRAS-201ENST00000256078 ROBO1Q9Y6N7 1651 aa29.05■■■□□ 2.24
KRAS-201ENST00000256078 NEXMIFQ5QGS0 1516 aa29.04■■■□□ 2.24
KRAS-201ENST00000256078 SLAIN2Q9P270 581 aa29.01■■■□□ 2.23
KRAS-201ENST00000256078 XRN1Q8IZH2 1706 aaKnown RBP29■■■□□ 2.23
KRAS-201ENST00000256078 AMOTL2Q9Y2J4 779 aa28.97■■■□□ 2.23
KRAS-201ENST00000256078 C19orf44Q9H6X5 657 aa28.95■■■□□ 2.22
KRAS-201ENST00000256078 METP08581 1390 aa28.95■■■□□ 2.22
KRAS-201ENST00000256078 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.92■■■□□ 2.22
KRAS-201ENST00000256078 ZNF326Q5BKZ1 582 aaKnown RBP28.92■■■□□ 2.22
KRAS-201ENST00000256078 DCCP43146 1447 aa28.92■■■□□ 2.22
KRAS-201ENST00000256078 SLC4A1APQ9BWU0 796 aaKnown RBP28.91■■■□□ 2.22
KRAS-201ENST00000256078 CADPS2Q86UW7 1296 aa28.9■■■□□ 2.22
KRAS-201ENST00000256078 PRAG1Q86YV5 1406 aa28.89■■■□□ 2.22
KRAS-201ENST00000256078 TRIM52Q96A61 297 aa28.89■■■□□ 2.22
KRAS-201ENST00000256078 RGS17Q9UGC6 210 aaPredicted RBP28.89■■■□□ 2.22
KRAS-201ENST00000256078 KIF1BO60333 1816 aa28.88■■■□□ 2.21
KRAS-201ENST00000256078 RPGRIP1LQ68CZ1 1315 aa28.87■■■□□ 2.21
KRAS-201ENST00000256078 COL16A1Q07092 1604 aaPredicted RBP28.86■■■□□ 2.21
KRAS-201ENST00000256078 AHDC1Q5TGY3 1603 aaPredicted RBP28.84■■■□□ 2.21
KRAS-201ENST00000256078 SETD1AO15047 1707 aaKnown RBP28.84■■■□□ 2.21
KRAS-201ENST00000256078 PHF23Q9BUL5 403 aaPredicted RBP28.84■■■□□ 2.21
KRAS-201ENST00000256078 PHLPP1O60346 1717 aa28.82■■■□□ 2.2
KRAS-201ENST00000256078 PTCH1Q13635 1447 aa28.81■■■□□ 2.2
KRAS-201ENST00000256078 JCADQ9P266 1359 aa28.81■■■□□ 2.2
KRAS-201ENST00000256078 VGFO15240 615 aaPredicted RBP28.81■■■□□ 2.2
KRAS-201ENST00000256078 ATF3P18847 181 aa28.81■■■□□ 2.2
KRAS-201ENST00000256078 C14orf37Q86TY3 774 aa28.8■■■□□ 2.2
KRAS-201ENST00000256078 MST1RQ04912 1400 aa28.79■■■□□ 2.2
KRAS-201ENST00000256078 SPATA31E1Q6ZUB1 1445 aa28.79■■■□□ 2.2
KRAS-201ENST00000256078 ADGRL3Q9HAR2 1447 aa28.79■■■□□ 2.2
KRAS-201ENST00000256078 BRINP3Q76B58 766 aa28.77■■■□□ 2.2
KRAS-201ENST00000256078 PPLO60437 1756 aa28.76■■■□□ 2.19
KRAS-201ENST00000256078 FOXD1Q16676 465 aa28.76■■■□□ 2.19
KRAS-201ENST00000256078 MPHOSPH9Q99550 1183 aa28.76■■■□□ 2.19
KRAS-201ENST00000256078 ACIN1Q9UKV3 1341 aaKnown RBP28.73■■■□□ 2.19
KRAS-201ENST00000256078 CCDC144AA2RUR9 1427 aa28.73■■■□□ 2.19
KRAS-201ENST00000256078 ASXL1Q8IXJ9 1541 aa28.73■■■□□ 2.19
KRAS-201ENST00000256078 ROBO2Q9HCK4 1378 aa28.72■■■□□ 2.19
KRAS-201ENST00000256078 NALCNQ8IZF0 1738 aa28.71■■■□□ 2.19
KRAS-201ENST00000256078 SETD5Q9C0A6 1442 aa28.69■■■□□ 2.18
KRAS-201ENST00000256078 SPATA31A6Q5VVP1 1343 aa28.69■■■□□ 2.18
KRAS-201ENST00000256078 LRP6O75581 1613 aa28.68■■■□□ 2.18
KRAS-201ENST00000256078 SHPRHQ149N8 1683 aa28.67■■■□□ 2.18
KRAS-201ENST00000256078 POTEAQ6S8J7 498 aa28.66■■■□□ 2.18
KRAS-201ENST00000256078 NHSL1Q5SYE7 1610 aa28.65■■■□□ 2.18
KRAS-201ENST00000256078 ANKRD30BQ9BXX2 1392 aa28.65■■■□□ 2.18
KRAS-201ENST00000256078 ADGRF5Q8IZF2 1346 aa28.65■■■□□ 2.18
KRAS-201ENST00000256078 IFT172Q9UG01 1749 aa28.64■■■□□ 2.18
KRAS-201ENST00000256078 TECPR2O15040 1411 aa28.63■■■□□ 2.17
KRAS-201ENST00000256078 LAMC1P11047 1609 aa28.62■■■□□ 2.17
KRAS-201ENST00000256078 C1orf167Q5SNV9 1468 aa28.62■■■□□ 2.17
KRAS-201ENST00000256078 PIK3C2GO75747 1445 aa28.61■■■□□ 2.17
KRAS-201ENST00000256078 RAB3GAP2Q9H2M9 1393 aa28.58■■■□□ 2.17
KRAS-201ENST00000256078 NRXN1Q9ULB1 1477 aa28.58■■■□□ 2.17
KRAS-201ENST00000256078 LRPPRCP42704 1394 aaKnown RBP28.55■■■□□ 2.16
KRAS-201ENST00000256078 RGL3Q3MIN7 710 aa28.55■■■□□ 2.16
KRAS-201ENST00000256078 ABCC11Q96J66 1382 aa28.54■■■□□ 2.16
KRAS-201ENST00000256078 CDC42BPGQ6DT37 1551 aa28.54■■■□□ 2.16
KRAS-201ENST00000256078 LRRC59Q96AG4 307 aaKnown RBP28.51■■■□□ 2.15
KRAS-201ENST00000256078 MYOM2P54296 1465 aa28.51■■■□□ 2.15
KRAS-201ENST00000256078 PNPLA6Q8IY17 1366 aa28.5■■■□□ 2.15
KRAS-201ENST00000256078 SOS2Q07890 1332 aaPredicted RBP28.49■■■□□ 2.15
KRAS-201ENST00000256078 DDX17Q92841 729 aaKnown RBP28.49■■■□□ 2.15
KRAS-201ENST00000256078 KNDC1Q76NI1 1749 aa28.49■■■□□ 2.15
KRAS-201ENST00000256078 HRCP23327 699 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms