RNA–Protein interactions for RNA: ENST00000256062.9

TMTC1-201, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene TMTC1, Length 8,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-201ENST00000256062 CCDC43Q96MW1 224 aaKnown RBP10.7□□□□□ -0.7
TMTC1-201ENST00000256062 TPM2P07951 284 aa10.7□□□□□ -0.7
TMTC1-201ENST00000256062 TRIM29Q14134 588 aa10.7□□□□□ -0.7
TMTC1-201ENST00000256062 ST20-MTHFSA0A0A6YYL1 179 aa10.7□□□□□ -0.7
TMTC1-201ENST00000256062 RAB3GAP2Q9H2M9 1393 aa10.69□□□□□ -0.7
TMTC1-201ENST00000256062 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.69□□□□□ -0.7
TMTC1-201ENST00000256062 NEUROD6Q96NK8 337 aa10.69□□□□□ -0.7
TMTC1-201ENST00000256062 CCDC27Q2M243 656 aa10.69□□□□□ -0.7
TMTC1-201ENST00000256062 NLRP13Q86W25 1043 aa10.69□□□□□ -0.7
TMTC1-201ENST00000256062 VPS37CA5D8V6 355 aaPredicted RBP10.69□□□□□ -0.7
TMTC1-201ENST00000256062 BICD2Q8TD16 824 aa10.68□□□□□ -0.7
TMTC1-201ENST00000256062 CARMIL2Q6F5E8 1435 aa10.68□□□□□ -0.7
TMTC1-201ENST00000256062 PSME1Q06323 249 aa10.68□□□□□ -0.7
TMTC1-201ENST00000256062 FKBP5Q13451 457 aaPredicted RBP10.68□□□□□ -0.7
TMTC1-201ENST00000256062 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
TMTC1-201ENST00000256062 CRBNQ96SW2 442 aa10.68□□□□□ -0.7
TMTC1-201ENST00000256062 TPM1P09493 284 aa10.67□□□□□ -0.7
TMTC1-201ENST00000256062 NAP1L1P55209 391 aaKnown RBP10.67□□□□□ -0.7
TMTC1-201ENST00000256062 PHF14O94880 888 aa10.67□□□□□ -0.7
TMTC1-201ENST00000256062 TSHZ2Q9NRE2 1034 aa10.67□□□□□ -0.7
TMTC1-201ENST00000256062 APAF1O14727 1248 aa10.67□□□□□ -0.7
TMTC1-201ENST00000256062 ZKSCAN2Q63HK3 967 aa10.67□□□□□ -0.7
TMTC1-201ENST00000256062 HMOX1P09601 288 aa10.66□□□□□ -0.7
TMTC1-201ENST00000256062 NLRP2Q9NX02 1062 aa10.66□□□□□ -0.7
TMTC1-201ENST00000256062 WASHC4Q2M389 1173 aa10.66□□□□□ -0.7
TMTC1-201ENST00000256062 CPLX2Q6PUV4 134 aaKnown RBP10.65□□□□□ -0.7
TMTC1-201ENST00000256062 IKQ13123 557 aaPredicted RBP10.65□□□□□ -0.7
TMTC1-201ENST00000256062 ZFYVE27Q5T4F4 411 aa10.65□□□□□ -0.7
TMTC1-201ENST00000256062 G3BP1Q13283 466 aaKnown RBP eCLIP10.65□□□□□ -0.7
TMTC1-201ENST00000256062 TIMELESSQ9UNS1 1208 aa10.65□□□□□ -0.71
TMTC1-201ENST00000256062 ZKSCAN1P17029 563 aaPredicted RBP10.64□□□□□ -0.71
TMTC1-201ENST00000256062 HOMER1Q86YM7 354 aa10.64□□□□□ -0.71
TMTC1-201ENST00000256062 ATP2B1P20020 1258 aa10.64□□□□□ -0.71
TMTC1-201ENST00000256062 RIPK4P57078 832 aa10.64□□□□□ -0.71
TMTC1-201ENST00000256062 TRDNQ13061 729 aa10.64□□□□□ -0.71
TMTC1-201ENST00000256062 CT47A1Q5JQC4 288 aaPredicted RBP10.64□□□□□ -0.71
TMTC1-201ENST00000256062 STK11IPQ8N1F8 1099 aa10.64□□□□□ -0.71
TMTC1-201ENST00000256062 SKIDA1Q1XH10 827 aa10.64□□□□□ -0.71
TMTC1-201ENST00000256062 IPO7O95373 1038 aaKnown RBP10.63□□□□□ -0.71
TMTC1-201ENST00000256062 TTLL5Q6EMB2 1281 aa10.63□□□□□ -0.71
TMTC1-201ENST00000256062 CCDC47Q96A33 483 aaKnown RBP10.63□□□□□ -0.71
TMTC1-201ENST00000256062 PDE4AP27815 886 aa10.63□□□□□ -0.71
TMTC1-201ENST00000256062 ERICH2A1L162 156 aa10.63□□□□□ -0.71
TMTC1-201ENST00000256062 DDX11L8A8MPP1 907 aa10.63□□□□□ -0.71
TMTC1-201ENST00000256062 DIAPH1O60610 1272 aaKnown RBP10.62□□□□□ -0.71
TMTC1-201ENST00000256062 PAF1Q8N7H5 531 aa10.62□□□□□ -0.71
TMTC1-201ENST00000256062 TMEM132AQ24JP5 1023 aa10.62□□□□□ -0.71
TMTC1-201ENST00000256062 CCDC70Q6NSX1 233 aa10.62□□□□□ -0.71
TMTC1-201ENST00000256062 TSPYL4Q9UJ04 414 aa10.62□□□□□ -0.71
TMTC1-201ENST00000256062 RIC3Q7Z5B4 369 aa10.62□□□□□ -0.71
TMTC1-201ENST00000256062 CGNL1Q0VF96 1302 aa10.62□□□□□ -0.71
TMTC1-201ENST00000256062 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
TMTC1-201ENST00000256062 RUFY2Q8WXA3 655 aa10.61□□□□□ -0.71
TMTC1-201ENST00000256062 CHMP4CQ96CF2 233 aa10.61□□□□□ -0.71
TMTC1-201ENST00000256062 SETQ01105 290 aaPredicted RBP10.61□□□□□ -0.71
TMTC1-201ENST00000256062 RBM42Q9BTD8 480 aaKnown RBP10.61□□□□□ -0.71
TMTC1-201ENST00000256062 ATP6V1DQ9Y5K8 247 aa10.61□□□□□ -0.71
TMTC1-201ENST00000256062 FAM161AQ3B820 660 aa10.61□□□□□ -0.71
TMTC1-201ENST00000256062 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.61□□□□□ -0.71
TMTC1-201ENST00000256062 IBSPP21815 317 aaPredicted RBP10.61□□□□□ -0.71
TMTC1-201ENST00000256062 ZNF771Q7L3S4 317 aaPredicted RBP10.61□□□□□ -0.71
TMTC1-201ENST00000256062 MYBBP1AQ9BQG0 1328 aaKnown RBP10.6□□□□□ -0.71
TMTC1-201ENST00000256062 RAPGEF4Q8WZA2 1011 aa10.6□□□□□ -0.71
TMTC1-201ENST00000256062 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
TMTC1-201ENST00000256062 ANKRD20A12PQ8NF67 263 aa10.6□□□□□ -0.71
TMTC1-201ENST00000256062 LNPKQ9C0E8 428 aa10.6□□□□□ -0.71
TMTC1-201ENST00000256062 R3HCC1Q9Y3T6 440 aaKnown RBP10.6□□□□□ -0.71
TMTC1-201ENST00000256062 FHOD3Q2V2M9 1422 aa10.6□□□□□ -0.71
TMTC1-201ENST00000256062 GGNBP2Q9H3C7 697 aa10.6□□□□□ -0.71
TMTC1-201ENST00000256062 ODF2Q5BJF6 829 aa10.6□□□□□ -0.71
TMTC1-201ENST00000256062 DDX58O95786 925 aaKnown RBP10.59□□□□□ -0.71
TMTC1-201ENST00000256062 PDILTQ8N807 584 aa10.59□□□□□ -0.71
TMTC1-201ENST00000256062 DNAJC2Q99543 621 aaKnown RBP10.59□□□□□ -0.71
TMTC1-201ENST00000256062 HSP90AA2PQ14568 343 aaPredicted RBP10.59□□□□□ -0.71
TMTC1-201ENST00000256062 STRN4Q9NRL3 753 aa10.59□□□□□ -0.71
TMTC1-201ENST00000256062 SMC3Q9UQE7 1217 aa10.59□□□□□ -0.71
TMTC1-201ENST00000256062 LRRFIP1Q32MZ4 808 aaKnown RBP10.58□□□□□ -0.72
TMTC1-201ENST00000256062 NUTM2BA6NNL0 878 aaPredicted RBP10.58□□□□□ -0.72
TMTC1-201ENST00000256062 NUTM2EB1AL46 878 aaPredicted RBP10.58□□□□□ -0.72
TMTC1-201ENST00000256062 E9PSI1 815 aa10.58□□□□□ -0.72
TMTC1-201ENST00000256062 VGFO15240 615 aaPredicted RBP10.58□□□□□ -0.72
TMTC1-201ENST00000256062 NUTM2AQ8IVF1 878 aaPredicted RBP10.58□□□□□ -0.72
TMTC1-201ENST00000256062 PDE3BQ13370 1112 aa10.58□□□□□ -0.72
TMTC1-201ENST00000256062 CENPQQ7L2Z9 268 aaPredicted RBP10.58□□□□□ -0.72
TMTC1-201ENST00000256062 RRP12Q5JTH9 1297 aaKnown RBP10.58□□□□□ -0.72
TMTC1-201ENST00000256062 FAM13BQ9NYF5 915 aa10.58□□□□□ -0.72
TMTC1-201ENST00000256062 RRP1P56182 461 aaKnown RBP10.58□□□□□ -0.72
TMTC1-201ENST00000256062 ATP2B2Q01814 1243 aa10.58□□□□□ -0.72
TMTC1-201ENST00000256062 DZIP1LQ8IYY4 767 aaKnown RBP10.58□□□□□ -0.72
TMTC1-201ENST00000256062 ATF3P18847 181 aa10.57□□□□□ -0.72
TMTC1-201ENST00000256062 RALYLQ86SE5 291 aaKnown RBP10.57□□□□□ -0.72
TMTC1-201ENST00000256062 FMN1Q68DA7 1419 aa10.57□□□□□ -0.72
TMTC1-201ENST00000256062 KIF15Q9NS87 1388 aa10.57□□□□□ -0.72
TMTC1-201ENST00000256062 HSP90AB2PQ58FF8 381 aa10.57□□□□□ -0.72
TMTC1-201ENST00000256062 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
TMTC1-201ENST00000256062 VSIG10Q8N0Z9 540 aa10.57□□□□□ -0.72
TMTC1-201ENST00000256062 CABP2Q9NPB3 220 aa10.57□□□□□ -0.72
TMTC1-201ENST00000256062 OFD1O75665 1012 aa10.57□□□□□ -0.72
TMTC1-201ENST00000256062 REC8O95072 547 aa10.57□□□□□ -0.72
TMTC1-201ENST00000256062 SAFBQ15424 915 aaKnown RBP eCLIP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms