RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ACIN1Q9UKV3 1341 aaKnown RBP26.69■■□□□ 1.86
SNRPA1-201ENST00000254193 BCANQ96GW7 911 aa26.69■■□□□ 1.86
SNRPA1-201ENST00000254193 IQGAP1P46940 1657 aa26.69■■□□□ 1.86
SNRPA1-201ENST00000254193 SLC26A8Q96RN1 970 aa26.68■■□□□ 1.86
SNRPA1-201ENST00000254193 TRPM2O94759 1503 aa26.67■■□□□ 1.86
SNRPA1-201ENST00000254193 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.67■■□□□ 1.86
SNRPA1-201ENST00000254193 SPHKAPQ2M3C7 1700 aa26.65■■□□□ 1.86
SNRPA1-201ENST00000254193 ZNF326Q5BKZ1 582 aaKnown RBP26.65■■□□□ 1.86
SNRPA1-201ENST00000254193 PLEKHG1Q9ULL1 1385 aa26.62■■□□□ 1.85
SNRPA1-201ENST00000254193 CLTCL1P53675 1640 aa26.61■■□□□ 1.85
SNRPA1-201ENST00000254193 HRCP23327 699 aa26.6■■□□□ 1.85
SNRPA1-201ENST00000254193 CPS1P31327 1500 aa26.58■■□□□ 1.85
SNRPA1-201ENST00000254193 MYO5BQ9ULV0 1848 aa26.57■■□□□ 1.84
SNRPA1-201ENST00000254193 IQSEC2Q5JU85 1478 aa26.56■■□□□ 1.84
SNRPA1-201ENST00000254193 CCDC144AA2RUR9 1427 aa26.55■■□□□ 1.84
SNRPA1-201ENST00000254193 KCNA6P17658 529 aa26.53■■□□□ 1.84
SNRPA1-201ENST00000254193 TBX22Q9Y458 520 aa26.53■■□□□ 1.84
SNRPA1-201ENST00000254193 UBAP1LF5GYI3 381 aa26.51■■□□□ 1.83
SNRPA1-201ENST00000254193 ADAMTS13Q76LX8 1427 aa26.5■■□□□ 1.83
SNRPA1-201ENST00000254193 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
SNRPA1-201ENST00000254193 RGL3Q3MIN7 710 aa26.49■■□□□ 1.83
SNRPA1-201ENST00000254193 RPGRIP1LQ68CZ1 1315 aa26.47■■□□□ 1.83
SNRPA1-201ENST00000254193 STRCP1A6NGW2 1772 aa26.46■■□□□ 1.83
SNRPA1-201ENST00000254193 NEXMIFQ5QGS0 1516 aa26.45■■□□□ 1.83
SNRPA1-201ENST00000254193 VGFO15240 615 aaPredicted RBP26.45■■□□□ 1.82
SNRPA1-201ENST00000254193 PROSER2Q86WR7 435 aaPredicted RBP26.45■■□□□ 1.82
SNRPA1-201ENST00000254193 RBM33Q96EV2 1170 aaKnown RBP26.44■■□□□ 1.82
SNRPA1-201ENST00000254193 SPATA31E1Q6ZUB1 1445 aa26.44■■□□□ 1.82
SNRPA1-201ENST00000254193 TMEM94Q12767 1356 aa26.42■■□□□ 1.82
SNRPA1-201ENST00000254193 ANKRD30BQ9BXX2 1392 aa26.42■■□□□ 1.82
SNRPA1-201ENST00000254193 KIF1BO60333 1816 aa26.4■■□□□ 1.82
SNRPA1-201ENST00000254193 TOM1O60784 492 aa26.4■■□□□ 1.82
SNRPA1-201ENST00000254193 PIK3R4Q99570 1358 aa26.38■■□□□ 1.81
SNRPA1-201ENST00000254193 AMOTL2Q9Y2J4 779 aa26.38■■□□□ 1.81
SNRPA1-201ENST00000254193 SETBP1Q9Y6X0 1596 aa26.37■■□□□ 1.81
SNRPA1-201ENST00000254193 METP08581 1390 aa26.37■■□□□ 1.81
SNRPA1-201ENST00000254193 PIP4K2BP78356 416 aa26.37■■□□□ 1.81
SNRPA1-201ENST00000254193 TRIM26Q12899 539 aaPredicted RBP26.37■■□□□ 1.81
SNRPA1-201ENST00000254193 DIP2AQ14689 1571 aa26.37■■□□□ 1.81
SNRPA1-201ENST00000254193 PTPRUQ92729 1446 aa26.36■■□□□ 1.81
SNRPA1-201ENST00000254193 NWD1Q149M9 1564 aa26.36■■□□□ 1.81
SNRPA1-201ENST00000254193 ADGRF5Q8IZF2 1346 aa26.36■■□□□ 1.81
SNRPA1-201ENST00000254193 SCAF1Q9H7N4 1312 aaKnown RBP26.36■■□□□ 1.81
SNRPA1-201ENST00000254193 NKTRP30414 1462 aaKnown RBP26.36■■□□□ 1.81
SNRPA1-201ENST00000254193 NRXN3Q9Y4C0 1643 aa26.34■■□□□ 1.81
SNRPA1-201ENST00000254193 ALKQ9UM73 1620 aa26.27■■□□□ 1.8
SNRPA1-201ENST00000254193 CHD2O14647 1828 aaKnown RBP26.26■■□□□ 1.79
SNRPA1-201ENST00000254193 C14orf37Q86TY3 774 aa26.26■■□□□ 1.79
SNRPA1-201ENST00000254193 PPLO60437 1756 aa26.24■■□□□ 1.79
SNRPA1-201ENST00000254193 MSH6P52701 1360 aa26.23■■□□□ 1.79
SNRPA1-201ENST00000254193 NCOA3Q9Y6Q9 1424 aa26.21■■□□□ 1.79
SNRPA1-201ENST00000254193 XIRP1Q702N8 1843 aaKnown RBP26.21■■□□□ 1.79
SNRPA1-201ENST00000254193 HSPA1LP34931 641 aa26.2■■□□□ 1.78
SNRPA1-201ENST00000254193 PIK3C2GO75747 1445 aa26.2■■□□□ 1.78
SNRPA1-201ENST00000254193 DCAF11Q8TEB1 546 aa26.19■■□□□ 1.78
SNRPA1-201ENST00000254193 C19orf44Q9H6X5 657 aa26.19■■□□□ 1.78
SNRPA1-201ENST00000254193 KDM2AQ9Y2K7 1162 aa26.19■■□□□ 1.78
SNRPA1-201ENST00000254193 TMEM132EQ6IEE7 984 aa26.18■■□□□ 1.78
SNRPA1-201ENST00000254193 XRN1Q8IZH2 1706 aaKnown RBP26.17■■□□□ 1.78
SNRPA1-201ENST00000254193 CFAP70Q5T0N1 1121 aa26.16■■□□□ 1.78
SNRPA1-201ENST00000254193 C14orf93Q9H972 538 aaKnown RBP26.16■■□□□ 1.78
SNRPA1-201ENST00000254193 STK26Q9P289 416 aa26.16■■□□□ 1.78
SNRPA1-201ENST00000254193 ROBO2Q9HCK4 1378 aa26.16■■□□□ 1.78
SNRPA1-201ENST00000254193 MYOM2P54296 1465 aa26.16■■□□□ 1.78
SNRPA1-201ENST00000254193 SLAIN2Q9P270 581 aa26.15■■□□□ 1.78
SNRPA1-201ENST00000254193 DHX57Q6P158 1386 aaKnown RBP26.15■■□□□ 1.78
SNRPA1-201ENST00000254193 NRXN1Q9ULB1 1477 aa26.15■■□□□ 1.78
SNRPA1-201ENST00000254193 ATF3P18847 181 aa26.14■■□□□ 1.78
SNRPA1-201ENST00000254193 IFT172Q9UG01 1749 aa26.14■■□□□ 1.77
SNRPA1-201ENST00000254193 SETD1AO15047 1707 aaKnown RBP26.12■■□□□ 1.77
SNRPA1-201ENST00000254193 CADPS2Q86UW7 1296 aa26.12■■□□□ 1.77
SNRPA1-201ENST00000254193 SIN3AQ96ST3 1273 aa26.11■■□□□ 1.77
SNRPA1-201ENST00000254193 PTCH1Q13635 1447 aa26.11■■□□□ 1.77
SNRPA1-201ENST00000254193 FAM135BQ49AJ0 1406 aa26.11■■□□□ 1.77
SNRPA1-201ENST00000254193 LRPPRCP42704 1394 aaKnown RBP26.1■■□□□ 1.77
SNRPA1-201ENST00000254193 STAC3Q96MF2 364 aa26.09■■□□□ 1.77
SNRPA1-201ENST00000254193 ASXL1Q8IXJ9 1541 aa26.08■■□□□ 1.77
SNRPA1-201ENST00000254193 PRAG1Q86YV5 1406 aa26.07■■□□□ 1.76
SNRPA1-201ENST00000254193 ABCC11Q96J66 1382 aa26.07■■□□□ 1.76
SNRPA1-201ENST00000254193 ADGRL3Q9HAR2 1447 aa26.06■■□□□ 1.76
SNRPA1-201ENST00000254193 NEUROD1Q13562 356 aa26.06■■□□□ 1.76
SNRPA1-201ENST00000254193 YTHDC2Q9H6S0 1430 aaKnown RBP26.05■■□□□ 1.76
SNRPA1-201ENST00000254193 WAPLQ7Z5K2 1190 aa26.05■■□□□ 1.76
SNRPA1-201ENST00000254193 TECPR2O15040 1411 aa26.03■■□□□ 1.76
SNRPA1-201ENST00000254193 DCCP43146 1447 aa26.03■■□□□ 1.76
SNRPA1-201ENST00000254193 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.01■■□□□ 1.75
SNRPA1-201ENST00000254193 PLEKHH1Q9ULM0 1364 aa26.01■■□□□ 1.75
SNRPA1-201ENST00000254193 L3MBTL2Q969R5 705 aa26■■□□□ 1.75
SNRPA1-201ENST00000254193 PCGF6Q9BYE7 350 aa25.99■■□□□ 1.75
SNRPA1-201ENST00000254193 MST1RQ04912 1400 aa25.97■■□□□ 1.75
SNRPA1-201ENST00000254193 SIRT1Q96EB6 747 aa25.97■■□□□ 1.75
SNRPA1-201ENST00000254193 ROBO1Q9Y6N7 1651 aa25.96■■□□□ 1.75
SNRPA1-201ENST00000254193 BRINP3Q76B58 766 aa25.96■■□□□ 1.75
SNRPA1-201ENST00000254193 TRAK1Q9UPV9 953 aa25.95■■□□□ 1.74
SNRPA1-201ENST00000254193 PRAM1Q96QH2 718 aa25.94■■□□□ 1.74
SNRPA1-201ENST00000254193 ADGRB1O14514 1584 aa25.94■■□□□ 1.74
SNRPA1-201ENST00000254193 LAMC1P11047 1609 aa25.93■■□□□ 1.74
SNRPA1-201ENST00000254193 SAFB2Q14151 953 aaKnown RBP eCLIP25.93■■□□□ 1.74
SNRPA1-201ENST00000254193 NALCNQ8IZF0 1738 aa25.92■■□□□ 1.74
SNRPA1-201ENST00000254193 POGKQ9P215 609 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms