RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 CLTCL1P53675 1640 aa37.39■■■■□ 3.58
LSM7-201ENST00000252622 CPS1P31327 1500 aa37.36■■■■□ 3.57
LSM7-201ENST00000252622 HDGFP51858 240 aaKnown RBP37.35■■■■□ 3.57
LSM7-201ENST00000252622 MPHOSPH9Q99550 1183 aa37.34■■■■□ 3.57
LSM7-201ENST00000252622 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.32■■■■□ 3.56
LSM7-201ENST00000252622 PLEKHG1Q9ULL1 1385 aa37.3■■■■□ 3.56
LSM7-201ENST00000252622 PPP1R15AO75807 674 aaPredicted RBP37.27■■■■□ 3.56
LSM7-201ENST00000252622 KIF1BO60333 1816 aa37.25■■■■□ 3.55
LSM7-201ENST00000252622 HRCP23327 699 aa37.25■■■■□ 3.55
LSM7-201ENST00000252622 FOXD1Q16676 465 aa37.25■■■■□ 3.55
LSM7-201ENST00000252622 STRCP1A6NGW2 1772 aa37.23■■■■□ 3.55
LSM7-201ENST00000252622 SLC26A8Q96RN1 970 aa37.19■■■■□ 3.54
LSM7-201ENST00000252622 ZNF326Q5BKZ1 582 aaKnown RBP37.18■■■■□ 3.54
LSM7-201ENST00000252622 CCDC144AA2RUR9 1427 aa37.18■■■■□ 3.54
LSM7-201ENST00000252622 BCANQ96GW7 911 aa37.17■■■■□ 3.54
LSM7-201ENST00000252622 NEXMIFQ5QGS0 1516 aa37.16■■■■□ 3.54
LSM7-201ENST00000252622 NUTM2DQ5VT03 806 aaPredicted RBP37.16■■■■□ 3.54
LSM7-201ENST00000252622 DIP2AQ14689 1571 aa37.14■■■■□ 3.54
LSM7-201ENST00000252622 LRRC7Q96NW7 1537 aa37.14■■■■□ 3.54
LSM7-201ENST00000252622 ADAMTS13Q76LX8 1427 aa37.13■■■■□ 3.53
LSM7-201ENST00000252622 NWD1Q149M9 1564 aa37.12■■■■□ 3.53
LSM7-201ENST00000252622 TBX22Q9Y458 520 aa37.11■■■■□ 3.53
LSM7-201ENST00000252622 KCNA6P17658 529 aa37.09■■■■□ 3.53
LSM7-201ENST00000252622 SETBP1Q9Y6X0 1596 aa37.08■■■■□ 3.53
LSM7-201ENST00000252622 SENP3Q9H4L4 574 aaPredicted RBP37.07■■■■□ 3.52
LSM7-201ENST00000252622 RPGRIP1LQ68CZ1 1315 aa37.07■■■■□ 3.52
LSM7-201ENST00000252622 NRXN3Q9Y4C0 1643 aa37.05■■■■□ 3.52
LSM7-201ENST00000252622 NKTRP30414 1462 aaKnown RBP37.05■■■■□ 3.52
LSM7-201ENST00000252622 SPATA31E1Q6ZUB1 1445 aa37.04■■■■□ 3.52
LSM7-201ENST00000252622 PIK3R4Q99570 1358 aa37.03■■■■□ 3.52
LSM7-201ENST00000252622 CHD2O14647 1828 aaKnown RBP37.01■■■■□ 3.51
LSM7-201ENST00000252622 PPLO60437 1756 aa36.99■■■■□ 3.51
LSM7-201ENST00000252622 UBAP1LF5GYI3 381 aa36.99■■■■□ 3.51
LSM7-201ENST00000252622 VGFO15240 615 aaPredicted RBP36.98■■■■□ 3.51
LSM7-201ENST00000252622 ANKRD30BQ9BXX2 1392 aa36.96■■■■□ 3.51
LSM7-201ENST00000252622 XIRP1Q702N8 1843 aaKnown RBP36.94■■■■□ 3.5
LSM7-201ENST00000252622 TMEM94Q12767 1356 aa36.92■■■■□ 3.5
LSM7-201ENST00000252622 TOM1O60784 492 aa36.91■■■■□ 3.5
LSM7-201ENST00000252622 PROSER2Q86WR7 435 aaPredicted RBP36.9■■■■□ 3.5
LSM7-201ENST00000252622 IFT172Q9UG01 1749 aa36.9■■■■□ 3.5
LSM7-201ENST00000252622 RGL3Q3MIN7 710 aa36.88■■■■□ 3.49
LSM7-201ENST00000252622 ALKQ9UM73 1620 aa36.88■■■■□ 3.49
LSM7-201ENST00000252622 PTPRUQ92729 1446 aa36.87■■■■□ 3.49
LSM7-201ENST00000252622 METP08581 1390 aa36.84■■■■□ 3.49
LSM7-201ENST00000252622 XRN1Q8IZH2 1706 aaKnown RBP36.84■■■■□ 3.49
LSM7-201ENST00000252622 SETD1AO15047 1707 aaKnown RBP36.82■■■■□ 3.49
LSM7-201ENST00000252622 AMOTL2Q9Y2J4 779 aa36.81■■■■□ 3.48
LSM7-201ENST00000252622 NCOA3Q9Y6Q9 1424 aa36.81■■■■□ 3.48
LSM7-201ENST00000252622 TRIM26Q12899 539 aaPredicted RBP36.8■■■■□ 3.48
LSM7-201ENST00000252622 ADGRF5Q8IZF2 1346 aa36.79■■■■□ 3.48
LSM7-201ENST00000252622 RBM33Q96EV2 1170 aaKnown RBP36.77■■■■□ 3.48
LSM7-201ENST00000252622 MYOM2P54296 1465 aa36.75■■■■□ 3.47
LSM7-201ENST00000252622 PIP4K2BP78356 416 aa36.74■■■■□ 3.47
LSM7-201ENST00000252622 PIK3C2GO75747 1445 aa36.74■■■■□ 3.47
LSM7-201ENST00000252622 MSH6P52701 1360 aa36.73■■■■□ 3.47
LSM7-201ENST00000252622 SCAF1Q9H7N4 1312 aaKnown RBP36.72■■■■□ 3.47
LSM7-201ENST00000252622 NRXN1Q9ULB1 1477 aa36.71■■■■□ 3.47
LSM7-201ENST00000252622 PRAG1Q86YV5 1406 aa36.7■■■■□ 3.47
LSM7-201ENST00000252622 PTCH1Q13635 1447 aa36.66■■■■□ 3.46
LSM7-201ENST00000252622 C14orf37Q86TY3 774 aa36.62■■■■□ 3.45
LSM7-201ENST00000252622 C19orf44Q9H6X5 657 aa36.6■■■■□ 3.45
LSM7-201ENST00000252622 ASXL1Q8IXJ9 1541 aa36.59■■■■□ 3.45
LSM7-201ENST00000252622 LAMC1P11047 1609 aa36.59■■■■□ 3.45
LSM7-201ENST00000252622 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.59■■■■□ 3.45
LSM7-201ENST00000252622 FAM135BQ49AJ0 1406 aa36.59■■■■□ 3.45
LSM7-201ENST00000252622 STAC3Q96MF2 364 aa36.58■■■■□ 3.45
LSM7-201ENST00000252622 DCCP43146 1447 aa36.57■■■■□ 3.44
LSM7-201ENST00000252622 DHX57Q6P158 1386 aaKnown RBP36.56■■■■□ 3.44
LSM7-201ENST00000252622 ROBO2Q9HCK4 1378 aa36.56■■■■□ 3.44
LSM7-201ENST00000252622 C14orf93Q9H972 538 aaKnown RBP36.56■■■■□ 3.44
LSM7-201ENST00000252622 HSPA1LP34931 641 aa36.55■■■■□ 3.44
LSM7-201ENST00000252622 ADGRL3Q9HAR2 1447 aa36.55■■■■□ 3.44
LSM7-201ENST00000252622 TECPR2O15040 1411 aa36.54■■■■□ 3.44
LSM7-201ENST00000252622 LRPPRCP42704 1394 aaKnown RBP36.53■■■■□ 3.44
LSM7-201ENST00000252622 CADPS2Q86UW7 1296 aa36.53■■■■□ 3.44
LSM7-201ENST00000252622 DCAF11Q8TEB1 546 aa36.53■■■■□ 3.44
LSM7-201ENST00000252622 SLAIN2Q9P270 581 aa36.51■■■■□ 3.44
LSM7-201ENST00000252622 ATF3P18847 181 aa36.5■■■■□ 3.43
LSM7-201ENST00000252622 KNDC1Q76NI1 1749 aa36.5■■■■□ 3.43
LSM7-201ENST00000252622 ROBO1Q9Y6N7 1651 aa36.49■■■■□ 3.43
LSM7-201ENST00000252622 NALCNQ8IZF0 1738 aa36.49■■■■□ 3.43
LSM7-201ENST00000252622 ABCC11Q96J66 1382 aa36.49■■■■□ 3.43
LSM7-201ENST00000252622 CFAP70Q5T0N1 1121 aa36.48■■■■□ 3.43
LSM7-201ENST00000252622 YTHDC2Q9H6S0 1430 aaKnown RBP36.48■■■■□ 3.43
LSM7-201ENST00000252622 TMEM132EQ6IEE7 984 aa36.47■■■■□ 3.43
LSM7-201ENST00000252622 KDM2AQ9Y2K7 1162 aa36.46■■■■□ 3.43
LSM7-201ENST00000252622 STK26Q9P289 416 aa36.42■■■■□ 3.42
LSM7-201ENST00000252622 ADGRB1O14514 1584 aa36.4■■■■□ 3.42
LSM7-201ENST00000252622 MST1RQ04912 1400 aa36.39■■■■□ 3.42
LSM7-201ENST00000252622 SIRT1Q96EB6 747 aa36.37■■■■□ 3.41
LSM7-201ENST00000252622 SIN3AQ96ST3 1273 aa36.34■■■■□ 3.41
LSM7-201ENST00000252622 DLC1Q96QB1 1528 aa36.34■■■■□ 3.41
LSM7-201ENST00000252622 CDC42BPGQ6DT37 1551 aa36.32■■■■□ 3.41
LSM7-201ENST00000252622 PLEKHH1Q9ULM0 1364 aa36.31■■■■□ 3.4
LSM7-201ENST00000252622 WAPLQ7Z5K2 1190 aa36.31■■■■□ 3.4
LSM7-201ENST00000252622 KIAA1210Q9ULL0 1709 aa36.28■■■■□ 3.4
LSM7-201ENST00000252622 AHDC1Q5TGY3 1603 aaPredicted RBP36.27■■■■□ 3.4
LSM7-201ENST00000252622 BRINP3Q76B58 766 aa36.27■■■■□ 3.4
LSM7-201ENST00000252622 L3MBTL2Q969R5 705 aa36.26■■■■□ 3.4
LSM7-201ENST00000252622 PHLPP1O60346 1717 aa36.25■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms