RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TXNDC2Q86VQ3 553 aa19.12■□□□□ 0.65
VPREB3-201ENST00000248948 TRIM52Q96A61 297 aa19.11■□□□□ 0.65
VPREB3-201ENST00000248948 NEXMIFQ5QGS0 1516 aa19.1■□□□□ 0.65
VPREB3-201ENST00000248948 PLEKHG1Q9ULL1 1385 aa19.09■□□□□ 0.65
VPREB3-201ENST00000248948 ILDR1Q86SU0 546 aaPredicted RBP19.09■□□□□ 0.65
VPREB3-201ENST00000248948 SLC4A1APQ9BWU0 796 aaKnown RBP19.09■□□□□ 0.65
VPREB3-201ENST00000248948 RAB3GAP2Q9H2M9 1393 aa19.08■□□□□ 0.65
VPREB3-201ENST00000248948 NRXN3Q9Y4C0 1643 aa19.07■□□□□ 0.64
VPREB3-201ENST00000248948 XIRP1Q702N8 1843 aaKnown RBP19.07■□□□□ 0.64
VPREB3-201ENST00000248948 SETBP1Q9Y6X0 1596 aa19.07■□□□□ 0.64
VPREB3-201ENST00000248948 PPLO60437 1756 aa19.07■□□□□ 0.64
VPREB3-201ENST00000248948 CHD2O14647 1828 aaKnown RBP19.07■□□□□ 0.64
VPREB3-201ENST00000248948 IFT172Q9UG01 1749 aa19.05■□□□□ 0.64
VPREB3-201ENST00000248948 NKTRP30414 1462 aaKnown RBP19.05■□□□□ 0.64
VPREB3-201ENST00000248948 HDGFP51858 240 aaKnown RBP19.05■□□□□ 0.64
VPREB3-201ENST00000248948 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.05■□□□□ 0.64
VPREB3-201ENST00000248948 LRRC7Q96NW7 1537 aa19.04■□□□□ 0.64
VPREB3-201ENST00000248948 CHGAP10645 457 aaKnown RBP19.03■□□□□ 0.64
VPREB3-201ENST00000248948 CCDC144AA2RUR9 1427 aa19.02■□□□□ 0.64
VPREB3-201ENST00000248948 PPP1R15AO75807 674 aaPredicted RBP19.02■□□□□ 0.64
VPREB3-201ENST00000248948 ADAMTS13Q76LX8 1427 aa19■□□□□ 0.63
VPREB3-201ENST00000248948 SETD1AO15047 1707 aaKnown RBP19■□□□□ 0.63
VPREB3-201ENST00000248948 MPHOSPH9Q99550 1183 aa19■□□□□ 0.63
VPREB3-201ENST00000248948 XRN1Q8IZH2 1706 aaKnown RBP18.99■□□□□ 0.63
VPREB3-201ENST00000248948 PIK3R4Q99570 1358 aa18.97■□□□□ 0.63
VPREB3-201ENST00000248948 HRCP23327 699 aa18.97■□□□□ 0.63
VPREB3-201ENST00000248948 ALKQ9UM73 1620 aa18.96■□□□□ 0.63
VPREB3-201ENST00000248948 SPATA31E1Q6ZUB1 1445 aa18.95■□□□□ 0.62
VPREB3-201ENST00000248948 ZNF326Q5BKZ1 582 aaKnown RBP18.94■□□□□ 0.62
VPREB3-201ENST00000248948 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
VPREB3-201ENST00000248948 FOXD1Q16676 465 aa18.93■□□□□ 0.62
VPREB3-201ENST00000248948 KCNA6P17658 529 aa18.92■□□□□ 0.62
VPREB3-201ENST00000248948 BCANQ96GW7 911 aa18.92■□□□□ 0.62
VPREB3-201ENST00000248948 TBX22Q9Y458 520 aa18.92■□□□□ 0.62
VPREB3-201ENST00000248948 RPGRIP1LQ68CZ1 1315 aa18.92■□□□□ 0.62
VPREB3-201ENST00000248948 LAMC1P11047 1609 aa18.9■□□□□ 0.62
VPREB3-201ENST00000248948 NUTM2DQ5VT03 806 aaPredicted RBP18.88■□□□□ 0.61
VPREB3-201ENST00000248948 UBAP1LF5GYI3 381 aa18.87■□□□□ 0.61
VPREB3-201ENST00000248948 MYOM2P54296 1465 aa18.87■□□□□ 0.61
VPREB3-201ENST00000248948 TMEM94Q12767 1356 aa18.87■□□□□ 0.61
VPREB3-201ENST00000248948 PRAG1Q86YV5 1406 aa18.87■□□□□ 0.61
VPREB3-201ENST00000248948 NCOA3Q9Y6Q9 1424 aa18.86■□□□□ 0.61
VPREB3-201ENST00000248948 ANKRD30BQ9BXX2 1392 aa18.86■□□□□ 0.61
VPREB3-201ENST00000248948 KNDC1Q76NI1 1749 aa18.86■□□□□ 0.61
VPREB3-201ENST00000248948 VGFO15240 615 aaPredicted RBP18.85■□□□□ 0.61
VPREB3-201ENST00000248948 TOM1O60784 492 aa18.85■□□□□ 0.61
VPREB3-201ENST00000248948 PTPRUQ92729 1446 aa18.84■□□□□ 0.61
VPREB3-201ENST00000248948 NRXN1Q9ULB1 1477 aa18.83■□□□□ 0.6
VPREB3-201ENST00000248948 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.83■□□□□ 0.6
VPREB3-201ENST00000248948 PIK3C2GO75747 1445 aa18.83■□□□□ 0.6
VPREB3-201ENST00000248948 NALCNQ8IZF0 1738 aa18.82■□□□□ 0.6
VPREB3-201ENST00000248948 PTCH1Q13635 1447 aa18.82■□□□□ 0.6
VPREB3-201ENST00000248948 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
VPREB3-201ENST00000248948 METP08581 1390 aa18.81■□□□□ 0.6
VPREB3-201ENST00000248948 MSH6P52701 1360 aa18.81■□□□□ 0.6
VPREB3-201ENST00000248948 ASXL1Q8IXJ9 1541 aa18.79■□□□□ 0.6
VPREB3-201ENST00000248948 ROBO1Q9Y6N7 1651 aa18.79■□□□□ 0.6
VPREB3-201ENST00000248948 PROSER2Q86WR7 435 aaPredicted RBP18.79■□□□□ 0.6
VPREB3-201ENST00000248948 DCCP43146 1447 aa18.79■□□□□ 0.6
VPREB3-201ENST00000248948 AMOTL2Q9Y2J4 779 aa18.76■□□□□ 0.59
VPREB3-201ENST00000248948 TECPR2O15040 1411 aa18.74■□□□□ 0.59
VPREB3-201ENST00000248948 RGL3Q3MIN7 710 aa18.74■□□□□ 0.59
VPREB3-201ENST00000248948 ADGRL3Q9HAR2 1447 aa18.74■□□□□ 0.59
VPREB3-201ENST00000248948 ADGRF5Q8IZF2 1346 aa18.74■□□□□ 0.59
VPREB3-201ENST00000248948 PIP4K2BP78356 416 aa18.73■□□□□ 0.59
VPREB3-201ENST00000248948 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
VPREB3-201ENST00000248948 FAM135BQ49AJ0 1406 aa18.72■□□□□ 0.59
VPREB3-201ENST00000248948 CDC42BPGQ6DT37 1551 aa18.71■□□□□ 0.59
VPREB3-201ENST00000248948 KIAA1210Q9ULL0 1709 aa18.71■□□□□ 0.59
VPREB3-201ENST00000248948 TRIM26Q12899 539 aaPredicted RBP18.69■□□□□ 0.58
VPREB3-201ENST00000248948 RBM33Q96EV2 1170 aaKnown RBP18.69■□□□□ 0.58
VPREB3-201ENST00000248948 PHLPP1O60346 1717 aa18.68■□□□□ 0.58
VPREB3-201ENST00000248948 ADGRB1O14514 1584 aa18.68■□□□□ 0.58
VPREB3-201ENST00000248948 LRPPRCP42704 1394 aaKnown RBP18.68■□□□□ 0.58
VPREB3-201ENST00000248948 ROBO2Q9HCK4 1378 aa18.68■□□□□ 0.58
VPREB3-201ENST00000248948 C14orf37Q86TY3 774 aa18.67■□□□□ 0.58
VPREB3-201ENST00000248948 STAC3Q96MF2 364 aa18.67■□□□□ 0.58
VPREB3-201ENST00000248948 C19orf44Q9H6X5 657 aa18.67■□□□□ 0.58
VPREB3-201ENST00000248948 AHDC1Q5TGY3 1603 aaPredicted RBP18.67■□□□□ 0.58
VPREB3-201ENST00000248948 DLC1Q96QB1 1528 aa18.66■□□□□ 0.58
VPREB3-201ENST00000248948 CADPS2Q86UW7 1296 aa18.66■□□□□ 0.58
VPREB3-201ENST00000248948 NHSL1Q5SYE7 1610 aa18.66■□□□□ 0.58
VPREB3-201ENST00000248948 YTHDC2Q9H6S0 1430 aaKnown RBP18.66■□□□□ 0.58
VPREB3-201ENST00000248948 COL16A1Q07092 1604 aaPredicted RBP18.64■□□□□ 0.57
VPREB3-201ENST00000248948 HSPA1LP34931 641 aa18.64■□□□□ 0.57
VPREB3-201ENST00000248948 DHX57Q6P158 1386 aaKnown RBP18.64■□□□□ 0.57
VPREB3-201ENST00000248948 ABCC11Q96J66 1382 aa18.64■□□□□ 0.57
VPREB3-201ENST00000248948 MST1RQ04912 1400 aa18.64■□□□□ 0.57
VPREB3-201ENST00000248948 ATF3P18847 181 aa18.62■□□□□ 0.57
VPREB3-201ENST00000248948 C14orf93Q9H972 538 aaKnown RBP18.62■□□□□ 0.57
VPREB3-201ENST00000248948 MED1Q15648 1581 aaPredicted RBP18.62■□□□□ 0.57
VPREB3-201ENST00000248948 ARHGEF28Q8N1W1 1705 aaKnown RBP18.62■□□□□ 0.57
VPREB3-201ENST00000248948 FMN2Q9NZ56 1722 aa18.62■□□□□ 0.57
VPREB3-201ENST00000248948 ADGRB2O60241 1585 aa18.61■□□□□ 0.57
VPREB3-201ENST00000248948 SLAIN2Q9P270 581 aa18.61■□□□□ 0.57
VPREB3-201ENST00000248948 SHPRHQ149N8 1683 aa18.59■□□□□ 0.57
VPREB3-201ENST00000248948 DCAF11Q8TEB1 546 aa18.58■□□□□ 0.56
VPREB3-201ENST00000248948 CFAP70Q5T0N1 1121 aa18.56■□□□□ 0.56
VPREB3-201ENST00000248948 KIF1AQ12756 1690 aa18.56■□□□□ 0.56
VPREB3-201ENST00000248948 TRPM1Q7Z4N2 1603 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms