RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 SENP3Q9H4L4 574 aaPredicted RBP24.69■■□□□ 1.54
CLPP-201ENST00000245816 NUP155O75694 1391 aa24.68■■□□□ 1.54
CLPP-201ENST00000245816 SCAF1Q9H7N4 1312 aaKnown RBP24.67■■□□□ 1.54
CLPP-201ENST00000245816 RBM33Q96EV2 1170 aaKnown RBP24.65■■□□□ 1.54
CLPP-201ENST00000245816 RIMS2Q9UQ26 1411 aa24.64■■□□□ 1.54
CLPP-201ENST00000245816 KCNA6P17658 529 aa24.63■■□□□ 1.53
CLPP-201ENST00000245816 NUTM2DQ5VT03 806 aaPredicted RBP24.61■■□□□ 1.53
CLPP-201ENST00000245816 NAIPQ13075 1403 aa24.61■■□□□ 1.53
CLPP-201ENST00000245816 TMEM94Q12767 1356 aa24.6■■□□□ 1.53
CLPP-201ENST00000245816 PLEKHG1Q9ULL1 1385 aa24.6■■□□□ 1.53
CLPP-201ENST00000245816 NWD1Q149M9 1564 aa24.59■■□□□ 1.53
CLPP-201ENST00000245816 ADAMTS13Q76LX8 1427 aa24.57■■□□□ 1.52
CLPP-201ENST00000245816 CHGAP10645 457 aaKnown RBP24.56■■□□□ 1.52
CLPP-201ENST00000245816 CHD2O14647 1828 aaKnown RBP24.54■■□□□ 1.52
CLPP-201ENST00000245816 PROSER2Q86WR7 435 aaPredicted RBP24.52■■□□□ 1.52
CLPP-201ENST00000245816 MED1Q15648 1581 aaPredicted RBP24.51■■□□□ 1.51
CLPP-201ENST00000245816 TBX22Q9Y458 520 aa24.51■■□□□ 1.51
CLPP-201ENST00000245816 SPHKAPQ2M3C7 1700 aa24.49■■□□□ 1.51
CLPP-201ENST00000245816 BCANQ96GW7 911 aa24.49■■□□□ 1.51
CLPP-201ENST00000245816 NKTRP30414 1462 aaKnown RBP24.49■■□□□ 1.51
CLPP-201ENST00000245816 PTPRUQ92729 1446 aa24.47■■□□□ 1.51
CLPP-201ENST00000245816 PPP1R15AO75807 674 aaPredicted RBP24.47■■□□□ 1.51
CLPP-201ENST00000245816 CLTCL1P53675 1640 aa24.46■■□□□ 1.51
CLPP-201ENST00000245816 NRXN3Q9Y4C0 1643 aa24.46■■□□□ 1.51
CLPP-201ENST00000245816 HFM1A2PYH4 1435 aa24.46■■□□□ 1.51
CLPP-201ENST00000245816 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.46■■□□□ 1.51
CLPP-201ENST00000245816 FAM135BQ49AJ0 1406 aa24.45■■□□□ 1.51
CLPP-201ENST00000245816 SOCS7O14512 581 aa24.43■■□□□ 1.5
CLPP-201ENST00000245816 HDGFP51858 240 aaKnown RBP24.43■■□□□ 1.5
CLPP-201ENST00000245816 TRPM2O94759 1503 aa24.4■■□□□ 1.5
CLPP-201ENST00000245816 ROBO1Q9Y6N7 1651 aa24.4■■□□□ 1.5
CLPP-201ENST00000245816 DIP2AQ14689 1571 aa24.38■■□□□ 1.49
CLPP-201ENST00000245816 NEXMIFQ5QGS0 1516 aa24.38■■□□□ 1.49
CLPP-201ENST00000245816 SETBP1Q9Y6X0 1596 aa24.36■■□□□ 1.49
CLPP-201ENST00000245816 METP08581 1390 aa24.35■■□□□ 1.49
CLPP-201ENST00000245816 PIK3R4Q99570 1358 aa24.35■■□□□ 1.49
CLPP-201ENST00000245816 TRIM52Q96A61 297 aa24.35■■□□□ 1.49
CLPP-201ENST00000245816 SLAIN2Q9P270 581 aa24.35■■□□□ 1.49
CLPP-201ENST00000245816 AMOTL2Q9Y2J4 779 aa24.35■■□□□ 1.49
CLPP-201ENST00000245816 FOXD1Q16676 465 aa24.34■■□□□ 1.49
CLPP-201ENST00000245816 RGS17Q9UGC6 210 aaPredicted RBP24.34■■□□□ 1.49
CLPP-201ENST00000245816 MSH6P52701 1360 aa24.33■■□□□ 1.49
CLPP-201ENST00000245816 ZNF326Q5BKZ1 582 aaKnown RBP24.32■■□□□ 1.48
CLPP-201ENST00000245816 XRN1Q8IZH2 1706 aaKnown RBP24.32■■□□□ 1.48
CLPP-201ENST00000245816 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.31■■□□□ 1.48
CLPP-201ENST00000245816 NCOA3Q9Y6Q9 1424 aa24.31■■□□□ 1.48
CLPP-201ENST00000245816 SLC4A1APQ9BWU0 796 aaKnown RBP24.29■■□□□ 1.48
CLPP-201ENST00000245816 KIF1BO60333 1816 aa24.27■■□□□ 1.48
CLPP-201ENST00000245816 C19orf44Q9H6X5 657 aa24.25■■□□□ 1.47
CLPP-201ENST00000245816 SETD1AO15047 1707 aaKnown RBP24.24■■□□□ 1.47
CLPP-201ENST00000245816 PHLPP1O60346 1717 aa24.21■■□□□ 1.47
CLPP-201ENST00000245816 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
CLPP-201ENST00000245816 MPHOSPH9Q99550 1183 aa24.2■■□□□ 1.46
CLPP-201ENST00000245816 C14orf37Q86TY3 774 aa24.19■■□□□ 1.46
CLPP-201ENST00000245816 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
CLPP-201ENST00000245816 PPLO60437 1756 aa24.18■■□□□ 1.46
CLPP-201ENST00000245816 ACIN1Q9UKV3 1341 aaKnown RBP24.17■■□□□ 1.46
CLPP-201ENST00000245816 BRINP3Q76B58 766 aa24.17■■□□□ 1.46
CLPP-201ENST00000245816 CADPS2Q86UW7 1296 aa24.17■■□□□ 1.46
CLPP-201ENST00000245816 MST1RQ04912 1400 aa24.16■■□□□ 1.46
CLPP-201ENST00000245816 SPATA31E1Q6ZUB1 1445 aa24.16■■□□□ 1.46
CLPP-201ENST00000245816 ATF3P18847 181 aa24.15■■□□□ 1.46
CLPP-201ENST00000245816 ROBO2Q9HCK4 1378 aa24.15■■□□□ 1.46
CLPP-201ENST00000245816 RPGRIP1LQ68CZ1 1315 aa24.14■■□□□ 1.46
CLPP-201ENST00000245816 ADGRF5Q8IZF2 1346 aa24.14■■□□□ 1.46
CLPP-201ENST00000245816 AHDC1Q5TGY3 1603 aaPredicted RBP24.14■■□□□ 1.46
CLPP-201ENST00000245816 POTEAQ6S8J7 498 aa24.14■■□□□ 1.45
CLPP-201ENST00000245816 NALCNQ8IZF0 1738 aa24.13■■□□□ 1.45
CLPP-201ENST00000245816 VGFO15240 615 aaPredicted RBP24.13■■□□□ 1.45
CLPP-201ENST00000245816 DCCP43146 1447 aa24.12■■□□□ 1.45
CLPP-201ENST00000245816 LRP6O75581 1613 aa24.12■■□□□ 1.45
CLPP-201ENST00000245816 ADGRL3Q9HAR2 1447 aa24.11■■□□□ 1.45
CLPP-201ENST00000245816 JCADQ9P266 1359 aa24.11■■□□□ 1.45
CLPP-201ENST00000245816 SETD5Q9C0A6 1442 aa24.1■■□□□ 1.45
CLPP-201ENST00000245816 DDX17Q92841 729 aaKnown RBP24.09■■□□□ 1.45
CLPP-201ENST00000245816 PRAG1Q86YV5 1406 aa24.09■■□□□ 1.45
CLPP-201ENST00000245816 RGL3Q3MIN7 710 aa24.08■■□□□ 1.45
CLPP-201ENST00000245816 ASXL1Q8IXJ9 1541 aa24.08■■□□□ 1.45
CLPP-201ENST00000245816 IFT172Q9UG01 1749 aa24.07■■□□□ 1.44
CLPP-201ENST00000245816 CCDC144AA2RUR9 1427 aa24.07■■□□□ 1.44
CLPP-201ENST00000245816 PTCH1Q13635 1447 aa24.07■■□□□ 1.44
CLPP-201ENST00000245816 RAB3GAP2Q9H2M9 1393 aa24.04■■□□□ 1.44
CLPP-201ENST00000245816 NHSL1Q5SYE7 1610 aa24.03■■□□□ 1.44
CLPP-201ENST00000245816 C1orf167Q5SNV9 1468 aa24.02■■□□□ 1.44
CLPP-201ENST00000245816 SHPRHQ149N8 1683 aa24.02■■□□□ 1.44
CLPP-201ENST00000245816 TMEM132EQ6IEE7 984 aa23.99■■□□□ 1.43
CLPP-201ENST00000245816 ORAI2Q96SN7 254 aa23.99■■□□□ 1.43
CLPP-201ENST00000245816 PIK3C2GO75747 1445 aa23.98■■□□□ 1.43
CLPP-201ENST00000245816 SPATA31A6Q5VVP1 1343 aa23.97■■□□□ 1.43
CLPP-201ENST00000245816 WAPLQ7Z5K2 1190 aa23.97■■□□□ 1.43
CLPP-201ENST00000245816 PLEKHH1Q9ULM0 1364 aa23.97■■□□□ 1.43
CLPP-201ENST00000245816 ANKRD30BQ9BXX2 1392 aa23.96■■□□□ 1.43
CLPP-201ENST00000245816 TECPR2O15040 1411 aa23.94■■□□□ 1.42
CLPP-201ENST00000245816 HRCP23327 699 aa23.94■■□□□ 1.42
CLPP-201ENST00000245816 STK26Q9P289 416 aa23.94■■□□□ 1.42
CLPP-201ENST00000245816 LAMC1P11047 1609 aa23.94■■□□□ 1.42
CLPP-201ENST00000245816 NRXN1Q9ULB1 1477 aa23.94■■□□□ 1.42
CLPP-201ENST00000245816 LRPPRCP42704 1394 aaKnown RBP23.93■■□□□ 1.42
CLPP-201ENST00000245816 ABCC11Q96J66 1382 aa23.91■■□□□ 1.42
CLPP-201ENST00000245816 PNPLA6Q8IY17 1366 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms