RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 ATP2B3Q16720 1220 aa12.17□□□□□ -0.46
IRF1-201ENST00000245414 NLRP13Q86W25 1043 aa12.17□□□□□ -0.46
IRF1-201ENST00000245414 ZKSCAN5Q9Y2L8 839 aa12.17□□□□□ -0.46
IRF1-201ENST00000245414 PTMSP20962 102 aa12.17□□□□□ -0.46
IRF1-201ENST00000245414 NAIPQ13075 1403 aa12.16□□□□□ -0.46
IRF1-201ENST00000245414 KIF15Q9NS87 1388 aa12.16□□□□□ -0.46
IRF1-201ENST00000245414 IGHDP01880 384 aa12.16□□□□□ -0.46
IRF1-201ENST00000245414 LRPPRCP42704 1394 aaKnown RBP12.16□□□□□ -0.46
IRF1-201ENST00000245414 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
IRF1-201ENST00000245414 C22orf23Q9BZE7 217 aa12.16□□□□□ -0.46
IRF1-201ENST00000245414 HFM1A2PYH4 1435 aa12.15□□□□□ -0.46
IRF1-201ENST00000245414 PDCL2Q8N4E4 241 aa12.15□□□□□ -0.46
IRF1-201ENST00000245414 CUL7Q14999 1698 aa12.15□□□□□ -0.46
IRF1-201ENST00000245414 DNAJC2Q99543 621 aaKnown RBP12.15□□□□□ -0.46
IRF1-201ENST00000245414 SLC4A1APQ9BWU0 796 aaKnown RBP12.15□□□□□ -0.46
IRF1-201ENST00000245414 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.46
IRF1-201ENST00000245414 IRX5P78411 483 aaPredicted RBP12.15□□□□□ -0.46
IRF1-201ENST00000245414 HS1BP3Q53T59 392 aa12.14□□□□□ -0.47
IRF1-201ENST00000245414 APPP05067 770 aa12.14□□□□□ -0.47
IRF1-201ENST00000245414 CHMP7Q8WUX9 453 aaPredicted RBP12.13□□□□□ -0.47
IRF1-201ENST00000245414 CCDC39Q9UFE4 941 aa12.13□□□□□ -0.47
IRF1-201ENST00000245414 KIAA2012Q0VF49 1180 aa12.13□□□□□ -0.47
IRF1-201ENST00000245414 NBPF1Q3BBV0 1214 aa12.13□□□□□ -0.47
IRF1-201ENST00000245414 KIF3AQ9Y496 699 aa12.13□□□□□ -0.47
IRF1-201ENST00000245414 KDM5BQ9UGL1 1544 aa12.13□□□□□ -0.47
IRF1-201ENST00000245414 TNNT3P45378 269 aaPredicted RBP12.13□□□□□ -0.47
IRF1-201ENST00000245414 CAVIN1Q6NZI2 390 aaKnown RBP12.13□□□□□ -0.47
IRF1-201ENST00000245414 MPNDQ8N594 471 aa12.13□□□□□ -0.47
IRF1-201ENST00000245414 MYRIPQ8NFW9 859 aa12.13□□□□□ -0.47
IRF1-201ENST00000245414 CCDC66A2RUB6 948 aa12.12□□□□□ -0.47
IRF1-201ENST00000245414 HMGN5P82970 282 aaKnown RBP12.12□□□□□ -0.47
IRF1-201ENST00000245414 ZBTB9Q96C00 473 aa12.12□□□□□ -0.47
IRF1-201ENST00000245414 GAPVD1Q14C86 1478 aa12.12□□□□□ -0.47
IRF1-201ENST00000245414 TRERF1Q96PN7 1200 aa12.12□□□□□ -0.47
IRF1-201ENST00000245414 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
IRF1-201ENST00000245414 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
IRF1-201ENST00000245414 U2AF2P26368 475 aaKnown RBP eCLIP12.11□□□□□ -0.47
IRF1-201ENST00000245414 CC2D1BQ5T0F9 858 aaKnown RBP12.11□□□□□ -0.47
IRF1-201ENST00000245414 TRIM34Q9BYJ4 488 aa12.11□□□□□ -0.47
IRF1-201ENST00000245414 PCF11O94913 1555 aaKnown RBP12.11□□□□□ -0.47
IRF1-201ENST00000245414 MRC2Q9UBG0 1479 aa12.11□□□□□ -0.47
IRF1-201ENST00000245414 MYOM3Q5VTT5 1437 aa12.11□□□□□ -0.47
IRF1-201ENST00000245414 RGS22Q8NE09 1264 aa12.1□□□□□ -0.47
IRF1-201ENST00000245414 PTPN23Q9H3S7 1636 aa12.1□□□□□ -0.47
IRF1-201ENST00000245414 USP47Q96K76 1375 aa12.1□□□□□ -0.47
IRF1-201ENST00000245414 MCM5P33992 734 aa12.1□□□□□ -0.47
IRF1-201ENST00000245414 COG6Q9Y2V7 657 aa12.09□□□□□ -0.47
IRF1-201ENST00000245414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.09□□□□□ -0.47
IRF1-201ENST00000245414 TIGD1Q96MW7 591 aa12.09□□□□□ -0.47
IRF1-201ENST00000245414 WDR43Q15061 677 aaKnown RBP eCLIP12.09□□□□□ -0.47
IRF1-201ENST00000245414 ZNF710Q8N1W2 664 aa12.09□□□□□ -0.47
IRF1-201ENST00000245414 RNF214Q8ND24 703 aa12.09□□□□□ -0.47
IRF1-201ENST00000245414 CTTNBP2Q8WZ74 1663 aa12.09□□□□□ -0.47
IRF1-201ENST00000245414 ERICH4A6NGS2 130 aa12.08□□□□□ -0.48
IRF1-201ENST00000245414 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.08□□□□□ -0.48
IRF1-201ENST00000245414 GOLGA2Q08379 1002 aa12.08□□□□□ -0.48
IRF1-201ENST00000245414 CHAF1AQ13111 956 aaPredicted RBP12.08□□□□□ -0.48
IRF1-201ENST00000245414 ROCK2O75116 1388 aaKnown RBP12.07□□□□□ -0.48
IRF1-201ENST00000245414 BCAR3O75815 825 aa12.07□□□□□ -0.48
IRF1-201ENST00000245414 PRIMPOLQ96LW4 560 aa12.07□□□□□ -0.48
IRF1-201ENST00000245414 CARD11Q9BXL7 1154 aa12.07□□□□□ -0.48
IRF1-201ENST00000245414 RBSNQ9H1K0 784 aa12.07□□□□□ -0.48
IRF1-201ENST00000245414 CLUAP1Q96AJ1 413 aa12.07□□□□□ -0.48
IRF1-201ENST00000245414 MCTP1Q6DN14 999 aa12.07□□□□□ -0.48
IRF1-201ENST00000245414 CHMP4CQ96CF2 233 aa12.07□□□□□ -0.48
IRF1-201ENST00000245414 KLHL40Q2TBA0 621 aa12.06□□□□□ -0.48
IRF1-201ENST00000245414 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
IRF1-201ENST00000245414 SSFA2P28290 1259 aa12.05□□□□□ -0.48
IRF1-201ENST00000245414 PDZRN3Q9UPQ7 1066 aa12.05□□□□□ -0.48
IRF1-201ENST00000245414 WDR62O43379 1518 aa12.05□□□□□ -0.48
IRF1-201ENST00000245414 PANK1Q8TE04 598 aa12.05□□□□□ -0.48
IRF1-201ENST00000245414 PBRM1Q86U86 1689 aa12.05□□□□□ -0.48
IRF1-201ENST00000245414 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
IRF1-201ENST00000245414 DUSP27Q5VZP5 1158 aa12.04□□□□□ -0.48
IRF1-201ENST00000245414 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
IRF1-201ENST00000245414 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
IRF1-201ENST00000245414 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.04□□□□□ -0.48
IRF1-201ENST00000245414 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
IRF1-201ENST00000245414 RAB3GAP1Q15042 981 aa12.04□□□□□ -0.48
IRF1-201ENST00000245414 ZSCAN23Q3MJ62 389 aa12.04□□□□□ -0.48
IRF1-201ENST00000245414 HDAC5Q9UQL6 1122 aa12.04□□□□□ -0.48
IRF1-201ENST00000245414 ST20-MTHFSA0A0A6YYL1 179 aa12.03□□□□□ -0.48
IRF1-201ENST00000245414 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
IRF1-201ENST00000245414 PMFBP1Q8TBY8 1022 aa12.03□□□□□ -0.48
IRF1-201ENST00000245414 ERCC6Q03468 1493 aa12.02□□□□□ -0.48
IRF1-201ENST00000245414 EFCAB5A4FU69 1503 aa12.02□□□□□ -0.48
IRF1-201ENST00000245414 ADRA2BP18089 450 aa12.02□□□□□ -0.49
IRF1-201ENST00000245414 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.49
IRF1-201ENST00000245414 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.02□□□□□ -0.49
IRF1-201ENST00000245414 ADAMTS8Q9UP79 889 aa12.02□□□□□ -0.49
IRF1-201ENST00000245414 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
IRF1-201ENST00000245414 RBM25P49756 843 aaKnown RBP12.01□□□□□ -0.49
IRF1-201ENST00000245414 PDLIM2Q96JY6 352 aa12.01□□□□□ -0.49
IRF1-201ENST00000245414 CALCOCO1Q9P1Z2 691 aa12.01□□□□□ -0.49
IRF1-201ENST00000245414 EIF3AQ14152 1382 aaKnown RBP12.01□□□□□ -0.49
IRF1-201ENST00000245414 C17orf53Q8N3J3 647 aaPredicted RBP12.01□□□□□ -0.49
IRF1-201ENST00000245414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.01□□□□□ -0.49
IRF1-201ENST00000245414 MIA2Q96PC5 1412 aa12.01□□□□□ -0.49
IRF1-201ENST00000245414 NLRP1Q9C000 1473 aa12.01□□□□□ -0.49
IRF1-201ENST00000245414 PLCB2Q00722 1185 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms