RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 NCBP3Q53F19 620 aaKnown RBP23.19■■□□□ 1.3
PKD2-201ENST00000237596 CABP2Q9NPB3 220 aa23.19■■□□□ 1.3
PKD2-201ENST00000237596 DDX19BQ9UMR2 479 aa23.19■■□□□ 1.3
PKD2-201ENST00000237596 FKBP5Q13451 457 aaPredicted RBP23.18■■□□□ 1.3
PKD2-201ENST00000237596 FYCO1Q9BQS8 1478 aa23.18■■□□□ 1.3
PKD2-201ENST00000237596 SYNJ2O15056 1496 aa23.18■■□□□ 1.3
PKD2-201ENST00000237596 KIAA2012Q0VF49 1180 aa23.18■■□□□ 1.3
PKD2-201ENST00000237596 CRBNQ96SW2 442 aa23.18■■□□□ 1.3
PKD2-201ENST00000237596 NLRP6P59044 892 aa23.17■■□□□ 1.3
PKD2-201ENST00000237596 KIF7Q2M1P5 1343 aa23.17■■□□□ 1.3
PKD2-201ENST00000237596 HMOX1P09601 288 aa23.16■■□□□ 1.3
PKD2-201ENST00000237596 NLRP2Q9NX02 1062 aa23.16■■□□□ 1.3
PKD2-201ENST00000237596 MIA2Q96PC5 1412 aa23.16■■□□□ 1.3
PKD2-201ENST00000237596 ARHGAP5Q13017 1502 aa23.16■■□□□ 1.3
PKD2-201ENST00000237596 TPM4P67936 248 aa23.16■■□□□ 1.3
PKD2-201ENST00000237596 KIF21BO75037 1637 aa23.16■■□□□ 1.3
PKD2-201ENST00000237596 LRRFIP1Q32MZ4 808 aaKnown RBP23.16■■□□□ 1.3
PKD2-201ENST00000237596 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
PKD2-201ENST00000237596 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
PKD2-201ENST00000237596 DIAPH3Q9NSV4 1193 aa23.15■■□□□ 1.3
PKD2-201ENST00000237596 DZIP1LQ8IYY4 767 aaKnown RBP23.15■■□□□ 1.3
PKD2-201ENST00000237596 GNAI1P63096 354 aa23.15■■□□□ 1.3
PKD2-201ENST00000237596 MEX3CQ5U5Q3 659 aaKnown RBP23.15■■□□□ 1.3
PKD2-201ENST00000237596 SF3A1Q15459 793 aaKnown RBP23.14■■□□□ 1.3
PKD2-201ENST00000237596 NUTM2GQ5VZR2 741 aa23.14■■□□□ 1.3
PKD2-201ENST00000237596 TXNDC2Q86VQ3 553 aa23.14■■□□□ 1.3
PKD2-201ENST00000237596 CCDC7Q96M83 1385 aa23.14■■□□□ 1.29
PKD2-201ENST00000237596 TSPYL4Q9UJ04 414 aa23.14■■□□□ 1.29
PKD2-201ENST00000237596 CFTRP13569 1480 aa23.13■■□□□ 1.29
PKD2-201ENST00000237596 MARCH6O60337 910 aa23.12■■□□□ 1.29
PKD2-201ENST00000237596 FAM161AQ3B820 660 aa23.12■■□□□ 1.29
PKD2-201ENST00000237596 CHMP4CQ96CF2 233 aa23.11■■□□□ 1.29
PKD2-201ENST00000237596 IFIT2P09913 472 aaKnown RBP23.1■■□□□ 1.29
PKD2-201ENST00000237596 RUFY2Q8WXA3 655 aa23.1■■□□□ 1.29
PKD2-201ENST00000237596 FOXD4L5Q5VV16 416 aaPredicted RBP23.09■■□□□ 1.29
PKD2-201ENST00000237596 FOXD4L4Q8WXT5 416 aaPredicted RBP23.09■■□□□ 1.29
PKD2-201ENST00000237596 NESP48681 1621 aa23.09■■□□□ 1.29
PKD2-201ENST00000237596 FAM184AQ8NB25 1140 aa23.08■■□□□ 1.29
PKD2-201ENST00000237596 VPS53Q5VIR6 699 aa23.08■■□□□ 1.28
PKD2-201ENST00000237596 H3BQV1 296 aa23.08■■□□□ 1.28
PKD2-201ENST00000237596 G3BP1Q13283 466 aaKnown RBP eCLIP23.08■■□□□ 1.28
PKD2-201ENST00000237596 IFFO2Q5TF58 517 aa23.08■■□□□ 1.28
PKD2-201ENST00000237596 AKAP17AQ02040 695 aaKnown RBP23.07■■□□□ 1.28
PKD2-201ENST00000237596 PDE4AP27815 886 aa23.07■■□□□ 1.28
PKD2-201ENST00000237596 NOL10Q9BSC4 688 aaKnown RBP23.07■■□□□ 1.28
PKD2-201ENST00000237596 MTHFSP49914 203 aa23.06■■□□□ 1.28
PKD2-201ENST00000237596 ROCK1Q13464 1354 aa23.06■■□□□ 1.28
PKD2-201ENST00000237596 MRC2Q9UBG0 1479 aa23.06■■□□□ 1.28
PKD2-201ENST00000237596 CPLX2Q6PUV4 134 aaKnown RBP23.06■■□□□ 1.28
PKD2-201ENST00000237596 RRBP1Q9P2E9 1410 aaKnown RBP23.06■■□□□ 1.28
PKD2-201ENST00000237596 REC8O95072 547 aa23.06■■□□□ 1.28
PKD2-201ENST00000237596 SYNE3Q6ZMZ3 975 aa23.06■■□□□ 1.28
PKD2-201ENST00000237596 GPRASP1Q5JY77 1395 aa23.05■■□□□ 1.28
PKD2-201ENST00000237596 GOLGA6L3A6NEY3 463 aa23.05■■□□□ 1.28
PKD2-201ENST00000237596 ZKSCAN1P17029 563 aaPredicted RBP23.05■■□□□ 1.28
PKD2-201ENST00000237596 PROSER2Q86WR7 435 aaPredicted RBP23.05■■□□□ 1.28
PKD2-201ENST00000237596 VPS37DQ86XT2 251 aa23.05■■□□□ 1.28
PKD2-201ENST00000237596 ABTB2Q8N961 1025 aa23.05■■□□□ 1.28
PKD2-201ENST00000237596 CREBRFQ8IUR6 639 aa23.04■■□□□ 1.28
PKD2-201ENST00000237596 FANCIQ9NVI1 1328 aa23.04■■□□□ 1.28
PKD2-201ENST00000237596 IFT140Q96RY7 1462 aa23.04■■□□□ 1.28
PKD2-201ENST00000237596 AMOTL1Q8IY63 956 aa23.03■■□□□ 1.28
PKD2-201ENST00000237596 ESCO1Q5FWF5 840 aa23.03■■□□□ 1.28
PKD2-201ENST00000237596 APPP05067 770 aa23.02■■□□□ 1.28
PKD2-201ENST00000237596 AMER1Q5JTC6 1135 aaPredicted RBP23.02■■□□□ 1.28
PKD2-201ENST00000237596 THEMISQ8N1K5 641 aaPredicted RBP23.02■■□□□ 1.28
PKD2-201ENST00000237596 ATP6V1DQ9Y5K8 247 aa23.02■■□□□ 1.28
PKD2-201ENST00000237596 ARAP1Q96P48 1450 aa23.02■■□□□ 1.28
PKD2-201ENST00000237596 SCAPERQ9BY12 1400 aa23.02■■□□□ 1.28
PKD2-201ENST00000237596 RIC3Q7Z5B4 369 aa23.01■■□□□ 1.27
PKD2-201ENST00000237596 PRAM1Q96QH2 718 aa23.01■■□□□ 1.27
PKD2-201ENST00000237596 PHF14O94880 888 aa23.01■■□□□ 1.27
PKD2-201ENST00000237596 HSP90AB4PQ58FF6 505 aa23.01■■□□□ 1.27
PKD2-201ENST00000237596 AIMP1Q12904 312 aaKnown RBP23■■□□□ 1.27
PKD2-201ENST00000237596 HFM1A2PYH4 1435 aa22.99■■□□□ 1.27
PKD2-201ENST00000237596 ERICH3Q5RHP9 1530 aa22.99■■□□□ 1.27
PKD2-201ENST00000237596 SLC52A1Q9NWF4 448 aa22.98■■□□□ 1.27
PKD2-201ENST00000237596 USP35Q9P2H5 1018 aa22.98■■□□□ 1.27
PKD2-201ENST00000237596 TRIM34Q9BYJ4 488 aa22.98■■□□□ 1.27
PKD2-201ENST00000237596 ADAMTS8Q9UP79 889 aa22.98■■□□□ 1.27
PKD2-201ENST00000237596 NBPF1Q3BBV0 1214 aa22.97■■□□□ 1.27
PKD2-201ENST00000237596 CNTLNQ9NXG0 1405 aa22.97■■□□□ 1.27
PKD2-201ENST00000237596 TCP11L2Q8N4U5 519 aa22.97■■□□□ 1.27
PKD2-201ENST00000237596 ANO2Q9NQ90 1003 aa22.96■■□□□ 1.27
PKD2-201ENST00000237596 RAD21O60216 631 aa22.96■■□□□ 1.27
PKD2-201ENST00000237596 RAPGEF3O95398 923 aa22.96■■□□□ 1.27
PKD2-201ENST00000237596 C9orf84Q5VXU9 1444 aa22.96■■□□□ 1.27
PKD2-201ENST00000237596 TRDNQ13061 729 aa22.96■■□□□ 1.27
PKD2-201ENST00000237596 MCTP1Q6DN14 999 aa22.96■■□□□ 1.27
PKD2-201ENST00000237596 FOXD4L6Q3SYB3 417 aaPredicted RBP22.96■■□□□ 1.27
PKD2-201ENST00000237596 FOXD4L3Q6VB84 417 aaPredicted RBP22.96■■□□□ 1.27
PKD2-201ENST00000237596 DDX11L8A8MPP1 907 aa22.95■■□□□ 1.26
PKD2-201ENST00000237596 GAS2L2Q8NHY3 880 aa22.95■■□□□ 1.26
PKD2-201ENST00000237596 PLEKHH2Q8IVE3 1493 aa22.95■■□□□ 1.26
PKD2-201ENST00000237596 TOPBP1Q92547 1522 aa22.95■■□□□ 1.26
PKD2-201ENST00000237596 RNF20Q5VTR2 975 aa22.95■■□□□ 1.26
PKD2-201ENST00000237596 CPLX1O14810 134 aa22.95■■□□□ 1.26
PKD2-201ENST00000237596 WASHC2AQ641Q2 1341 aa22.94■■□□□ 1.26
PKD2-201ENST00000237596 TROQ12816 1431 aaPredicted RBP22.94■■□□□ 1.26
PKD2-201ENST00000237596 LNPKQ9C0E8 428 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms