RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 DIAPH3Q9NSV4 1193 aa8.85□□□□□ -0.99
CPS1-201ENST00000233072 FRAT2O75474 233 aaPredicted RBP8.85□□□□□ -0.99
CPS1-201ENST00000233072 GTF2E1P29083 439 aaPredicted RBP8.84□□□□□ -0.99
CPS1-201ENST00000233072 RSPH6AQ9H0K4 717 aa8.84□□□□□ -0.99
CPS1-201ENST00000233072 GPS2Q13227 327 aa8.84□□□□□ -0.99
CPS1-201ENST00000233072 RNF20Q5VTR2 975 aa8.84□□□□□ -0.99
CPS1-201ENST00000233072 WASHC2AQ641Q2 1341 aa8.84□□□□□ -0.99
CPS1-201ENST00000233072 HECW1Q76N89 1606 aa8.84□□□□□ -0.99
CPS1-201ENST00000233072 DIAPH1O60610 1272 aaKnown RBP8.84□□□□□ -0.99
CPS1-201ENST00000233072 GOLGA6L19H0YKK7 550 aa8.84□□□□□ -0.99
CPS1-201ENST00000233072 TRIM34Q9BYJ4 488 aa8.84□□□□□ -0.99
CPS1-201ENST00000233072 TRAK1Q9UPV9 953 aa8.84□□□□□ -0.99
CPS1-201ENST00000233072 ANKRD20A12PQ8NF67 263 aa8.83□□□□□ -1
CPS1-201ENST00000233072 TEFQ10587 303 aa8.83□□□□□ -1
CPS1-201ENST00000233072 TOMM22Q9NS69 142 aa8.83□□□□□ -1
CPS1-201ENST00000233072 ZKSCAN1P17029 563 aaPredicted RBP8.83□□□□□ -1
CPS1-201ENST00000233072 NINLQ9Y2I6 1382 aa8.83□□□□□ -1
CPS1-201ENST00000233072 EVA1CP58658 441 aa8.82□□□□□ -1
CPS1-201ENST00000233072 RUNDC1Q96C34 613 aa8.82□□□□□ -1
CPS1-201ENST00000233072 ARHGAP5Q13017 1502 aa8.82□□□□□ -1
CPS1-201ENST00000233072 AMER1Q5JTC6 1135 aaPredicted RBP8.82□□□□□ -1
CPS1-201ENST00000233072 LRRC9Q6ZRR7 1453 aa8.82□□□□□ -1
CPS1-201ENST00000233072 GNAI1P63096 354 aa8.82□□□□□ -1
CPS1-201ENST00000233072 ST20-MTHFSA0A0A6YYL1 179 aa8.81□□□□□ -1
CPS1-201ENST00000233072 ERC2O15083 957 aa8.81□□□□□ -1
CPS1-201ENST00000233072 GZF1Q9H116 711 aaPredicted RBP8.81□□□□□ -1
CPS1-201ENST00000233072 GRIN2BQ13224 1484 aa8.81□□□□□ -1
CPS1-201ENST00000233072 ANKRD45Q5TZF3 282 aa8.81□□□□□ -1
CPS1-201ENST00000233072 VPS53Q5VIR6 699 aa8.81□□□□□ -1
CPS1-201ENST00000233072 SYNJ2O15056 1496 aa8.81□□□□□ -1
CPS1-201ENST00000233072 IFIT2P09913 472 aaKnown RBP8.81□□□□□ -1
CPS1-201ENST00000233072 TCEAL9Q9UHQ7 104 aa8.81□□□□□ -1
CPS1-201ENST00000233072 RILPL2Q969X0 211 aa8.81□□□□□ -1
CPS1-201ENST00000233072 CTDP1Q9Y5B0 961 aaPredicted RBP8.81□□□□□ -1
CPS1-201ENST00000233072 INTS3Q68E01 1043 aaKnown RBP8.8□□□□□ -1
CPS1-201ENST00000233072 PRKRIP1Q9H875 184 aaPredicted RBP8.8□□□□□ -1
CPS1-201ENST00000233072 SMG6Q86US8 1419 aaKnown RBP8.8□□□□□ -1
CPS1-201ENST00000233072 ERICH2A1L162 156 aa8.79□□□□□ -1
CPS1-201ENST00000233072 CLUAP1Q96AJ1 413 aa8.79□□□□□ -1
CPS1-201ENST00000233072 LTV1Q96GA3 475 aaPredicted RBP8.79□□□□□ -1
CPS1-201ENST00000233072 ANO2Q9NQ90 1003 aa8.79□□□□□ -1
CPS1-201ENST00000233072 C9orf78Q9NZ63 289 aaPredicted RBP8.79□□□□□ -1
CPS1-201ENST00000233072 BRD4O60885 1362 aaPredicted RBP8.79□□□□□ -1
CPS1-201ENST00000233072 BECN2A8MW95 431 aa8.79□□□□□ -1
CPS1-201ENST00000233072 DZIP1LQ8IYY4 767 aaKnown RBP8.79□□□□□ -1
CPS1-201ENST00000233072 NCAPD3P42695 1498 aa8.79□□□□□ -1
CPS1-201ENST00000233072 NCOA2Q15596 1464 aa8.79□□□□□ -1
CPS1-201ENST00000233072 TRDNQ13061 729 aa8.79□□□□□ -1
CPS1-201ENST00000233072 HFM1A2PYH4 1435 aa8.79□□□□□ -1
CPS1-201ENST00000233072 G3BP1Q13283 466 aaKnown RBP eCLIP8.78□□□□□ -13e-6■■■■□ 19.4
CPS1-201ENST00000233072 OSCARQ8IYS5 282 aa8.78□□□□□ -1
CPS1-201ENST00000233072 PDE4AP27815 886 aa8.78□□□□□ -1
CPS1-201ENST00000233072 IPO7O95373 1038 aaKnown RBP8.78□□□□□ -1
CPS1-201ENST00000233072 NUCB2P80303 420 aa8.78□□□□□ -1
CPS1-201ENST00000233072 TSHZ2Q9NRE2 1034 aa8.78□□□□□ -1
CPS1-201ENST00000233072 IFT140Q96RY7 1462 aa8.78□□□□□ -1
CPS1-201ENST00000233072 NUTM2DQ5VT03 806 aaPredicted RBP8.78□□□□□ -1
CPS1-201ENST00000233072 CCDC7Q96M83 1385 aa8.78□□□□□ -1
CPS1-201ENST00000233072 MRC2Q9UBG0 1479 aa8.77□□□□□ -1
CPS1-201ENST00000233072 HSP90AA2PQ14568 343 aaPredicted RBP8.77□□□□□ -1.01
CPS1-201ENST00000233072 NOL8Q76FK4 1167 aaKnown RBP8.77□□□□□ -1.01
CPS1-201ENST00000233072 DDX49Q9Y6V7 483 aaKnown RBP8.77□□□□□ -1.01
CPS1-201ENST00000233072 ANKRD50Q9ULJ7 1429 aa8.77□□□□□ -1.01
CPS1-201ENST00000233072 CRBNQ96SW2 442 aa8.77□□□□□ -1.01
CPS1-201ENST00000233072 LETM1O95202 739 aaPredicted RBP8.77□□□□□ -1.01
CPS1-201ENST00000233072 BRMS1Q9HCU9 246 aa8.77□□□□□ -1.01
CPS1-201ENST00000233072 HIP1O00291 1037 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 CHMP5Q9NZZ3 219 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 KIF7Q2M1P5 1343 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 FANCIQ9NVI1 1328 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 IGF1RP08069 1367 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 CPLX1O14810 134 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 PRM3Q9NNZ6 103 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 SUPT6HQ7KZ85 1726 aaKnown RBP8.76□□□□□ -1.01
CPS1-201ENST00000233072 MINK1Q8N4C8 1332 aaPredicted RBP8.76□□□□□ -1.01
CPS1-201ENST00000233072 RIPK4P57078 832 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 CREBRFQ8IUR6 639 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 CDR1P51861 262 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 PSME1Q06323 249 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 RRP7AQ9Y3A4 280 aaKnown RBP8.76□□□□□ -1.01
CPS1-201ENST00000233072 PSMA5P28066 241 aa8.76□□□□□ -1.01
CPS1-201ENST00000233072 DHX8Q14562 1220 aaKnown RBP8.76□□□□□ -1.01
CPS1-201ENST00000233072 SAFBQ15424 915 aaKnown RBP eCLIP8.76□□□□□ -1.01
CPS1-201ENST00000233072 ACBD3Q9H3P7 528 aa8.75□□□□□ -1.01
CPS1-201ENST00000233072 FOXD4L1Q9NU39 408 aa8.75□□□□□ -1.01
CPS1-201ENST00000233072 VPS37DQ86XT2 251 aa8.75□□□□□ -1.01
CPS1-201ENST00000233072 PES1O00541 588 aaKnown RBP8.75□□□□□ -1.01
CPS1-201ENST00000233072 CDC45O75419 566 aa8.74□□□□□ -1.01
CPS1-201ENST00000233072 XBP1P17861 261 aa8.74□□□□□ -1.01
CPS1-201ENST00000233072 HMGB2P26583 209 aaKnown RBP8.74□□□□□ -1.01
CPS1-201ENST00000233072 MEX3CQ5U5Q3 659 aaKnown RBP8.74□□□□□ -1.01
CPS1-201ENST00000233072 HMGXB3Q12766 1538 aa8.74□□□□□ -1.01
CPS1-201ENST00000233072 GSE1Q14687 1217 aa8.74□□□□□ -1.01
CPS1-201ENST00000233072 NAT10Q9H0A0 1025 aaKnown RBP8.74□□□□□ -1.01
CPS1-201ENST00000233072 GAS2L2Q8NHY3 880 aa8.74□□□□□ -1.01
CPS1-201ENST00000233072 GPRASP1Q5JY77 1395 aa8.74□□□□□ -1.01
CPS1-201ENST00000233072 TEX35Q5T0J7 233 aa8.74□□□□□ -1.01
CPS1-201ENST00000233072 MCTP1Q6DN14 999 aa8.74□□□□□ -1.01
CPS1-201ENST00000233072 ERC1Q8IUD2 1116 aa8.74□□□□□ -1.01
CPS1-201ENST00000233072 NFXL1Q6ZNB6 911 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms