RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 GSE1Q14687 1217 aa14.16□□□□□ -0.14
LAMA4-201ENST00000230538 NEXNQ0ZGT2 675 aa14.16□□□□□ -0.14
LAMA4-201ENST00000230538 NGEFQ8N5V2 710 aa14.16□□□□□ -0.14
LAMA4-201ENST00000230538 RUFY2Q8WXA3 655 aa14.16□□□□□ -0.14
LAMA4-201ENST00000230538 TTC5Q8N0Z6 440 aa14.15□□□□□ -0.14
LAMA4-201ENST00000230538 EIF2S2P20042 333 aaKnown RBP14.15□□□□□ -0.14
LAMA4-201ENST00000230538 AMOTL1Q8IY63 956 aa14.15□□□□□ -0.14
LAMA4-201ENST00000230538 C9orf78Q9NZ63 289 aaPredicted RBP14.15□□□□□ -0.14
LAMA4-201ENST00000230538 TRIM29Q14134 588 aa14.15□□□□□ -0.14
LAMA4-201ENST00000230538 NOL10Q9BSC4 688 aaKnown RBP14.15□□□□□ -0.15
LAMA4-201ENST00000230538 VGFO15240 615 aaPredicted RBP14.14□□□□□ -0.15
LAMA4-201ENST00000230538 ANO2Q9NQ90 1003 aa14.14□□□□□ -0.15
LAMA4-201ENST00000230538 CPLX2Q6PUV4 134 aaKnown RBP14.14□□□□□ -0.15
LAMA4-201ENST00000230538 REC8O95072 547 aa14.13□□□□□ -0.15
LAMA4-201ENST00000230538 CCDC70Q6NSX1 233 aa14.13□□□□□ -0.15
LAMA4-201ENST00000230538 RAD21O60216 631 aa14.13□□□□□ -0.15
LAMA4-201ENST00000230538 ZKSCAN1P17029 563 aaPredicted RBP14.13□□□□□ -0.15
LAMA4-201ENST00000230538 TRIM34Q9BYJ4 488 aa14.13□□□□□ -0.15
LAMA4-201ENST00000230538 MINK1Q8N4C8 1332 aaPredicted RBP14.12□□□□□ -0.15
LAMA4-201ENST00000230538 TCEAL9Q9UHQ7 104 aa14.12□□□□□ -0.15
LAMA4-201ENST00000230538 IFIT2P09913 472 aaKnown RBP14.12□□□□□ -0.15
LAMA4-201ENST00000230538 DDX19BQ9UMR2 479 aa14.12□□□□□ -0.15
LAMA4-201ENST00000230538 SETQ01105 290 aaPredicted RBP14.12□□□□□ -0.15
LAMA4-201ENST00000230538 HSP90AA2PQ14568 343 aaPredicted RBP14.12□□□□□ -0.15
LAMA4-201ENST00000230538 APAF1O14727 1248 aa14.12□□□□□ -0.15
LAMA4-201ENST00000230538 PCMTD1Q96MG8 357 aaPredicted RBP14.11□□□□□ -0.15
LAMA4-201ENST00000230538 NECTIN2Q92692 538 aa14.11□□□□□ -0.15
LAMA4-201ENST00000230538 APPP05067 770 aa14.11□□□□□ -0.15
LAMA4-201ENST00000230538 ZNF592Q92610 1267 aa14.11□□□□□ -0.15
LAMA4-201ENST00000230538 JPH4Q96JJ6 628 aa14.11□□□□□ -0.15
LAMA4-201ENST00000230538 MSH5O43196 834 aa14.1□□□□□ -0.15
LAMA4-201ENST00000230538 DIAPH1O60610 1272 aaKnown RBP14.1□□□□□ -0.15
LAMA4-201ENST00000230538 GPS2Q13227 327 aa14.1□□□□□ -0.15
LAMA4-201ENST00000230538 ROCK1Q13464 1354 aa14.1□□□□□ -0.15
LAMA4-201ENST00000230538 CCDC47Q96A33 483 aaKnown RBP14.09□□□□□ -0.15
LAMA4-201ENST00000230538 CTDP1Q9Y5B0 961 aaPredicted RBP14.09□□□□□ -0.15
LAMA4-201ENST00000230538 CPLX1O14810 134 aa14.09□□□□□ -0.15
LAMA4-201ENST00000230538 WWC1Q8IX03 1113 aa14.09□□□□□ -0.15
LAMA4-201ENST00000230538 RSPH6AQ9H0K4 717 aa14.09□□□□□ -0.15
LAMA4-201ENST00000230538 RIPK4P57078 832 aa14.09□□□□□ -0.15
LAMA4-201ENST00000230538 API5Q9BZZ5 524 aaKnown RBP14.08□□□□□ -0.15
LAMA4-201ENST00000230538 DZIP1LQ8IYY4 767 aaKnown RBP14.08□□□□□ -0.16
LAMA4-201ENST00000230538 DDX58O95786 925 aaKnown RBP14.08□□□□□ -0.16
LAMA4-201ENST00000230538 ANKRD20A12PQ8NF67 263 aa14.08□□□□□ -0.16
LAMA4-201ENST00000230538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.08□□□□□ -0.16
LAMA4-201ENST00000230538 VPS37DQ86XT2 251 aa14.08□□□□□ -0.16
LAMA4-201ENST00000230538 RNF20Q5VTR2 975 aa14.07□□□□□ -0.16
LAMA4-201ENST00000230538 BICD2Q8TD16 824 aa14.07□□□□□ -0.16
LAMA4-201ENST00000230538 HOOK1Q9UJC3 728 aaKnown RBP14.07□□□□□ -0.16
LAMA4-201ENST00000230538 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
LAMA4-201ENST00000230538 IPO7O95373 1038 aaKnown RBP14.07□□□□□ -0.16
LAMA4-201ENST00000230538 TRDNQ13061 729 aa14.07□□□□□ -0.16
LAMA4-201ENST00000230538 SMARCA4P51532 1647 aa14.07□□□□□ -0.16
LAMA4-201ENST00000230538 DHX16O60231 1041 aaKnown RBP14.07□□□□□ -0.16
LAMA4-201ENST00000230538 G3BP1Q13283 466 aaKnown RBP eCLIP14.07□□□□□ -0.16
LAMA4-201ENST00000230538 FANCIQ9NVI1 1328 aa14.06□□□□□ -0.16
LAMA4-201ENST00000230538 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
LAMA4-201ENST00000230538 NFXL1Q6ZNB6 911 aa14.06□□□□□ -0.16
LAMA4-201ENST00000230538 FKBP5Q13451 457 aaPredicted RBP14.05□□□□□ -0.16
LAMA4-201ENST00000230538 FBXW7Q969H0 707 aa14.05□□□□□ -0.16
LAMA4-201ENST00000230538 ERICH2A1L162 156 aa14.05□□□□□ -0.16
LAMA4-201ENST00000230538 INTS3Q68E01 1043 aaKnown RBP14.04□□□□□ -0.16
LAMA4-201ENST00000230538 SYTL4Q96C24 671 aaPredicted RBP14.04□□□□□ -0.16
LAMA4-201ENST00000230538 PSME1Q06323 249 aa14.04□□□□□ -0.16
LAMA4-201ENST00000230538 RUNDC1Q96C34 613 aa14.04□□□□□ -0.16
LAMA4-201ENST00000230538 CHMP5Q9NZZ3 219 aa14.04□□□□□ -0.16
LAMA4-201ENST00000230538 HOMER1Q86YM7 354 aa14.03□□□□□ -0.16
LAMA4-201ENST00000230538 VPS37CA5D8V6 355 aaPredicted RBP14.03□□□□□ -0.16
LAMA4-201ENST00000230538 SMC3Q9UQE7 1217 aa14.03□□□□□ -0.16
LAMA4-201ENST00000230538 FOSBP53539 338 aa14.02□□□□□ -0.17
LAMA4-201ENST00000230538 SASS6Q6UVJ0 657 aa14.02□□□□□ -0.17
LAMA4-201ENST00000230538 ZNF771Q7L3S4 317 aaPredicted RBP14.02□□□□□ -0.17
LAMA4-201ENST00000230538 PATL2C9JE40 543 aaKnown RBP14.02□□□□□ -0.17
LAMA4-201ENST00000230538 TSPYL4Q9UJ04 414 aa14.02□□□□□ -0.17
LAMA4-201ENST00000230538 ERC2O15083 957 aa14.01□□□□□ -0.17
LAMA4-201ENST00000230538 HSP90AB4PQ58FF6 505 aa14.01□□□□□ -0.17
LAMA4-201ENST00000230538 CCDC7Q96M83 1385 aa14.01□□□□□ -0.17
LAMA4-201ENST00000230538 CNTLNQ9NXG0 1405 aa14□□□□□ -0.17
LAMA4-201ENST00000230538 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
LAMA4-201ENST00000230538 PTPRGP23470 1445 aa14□□□□□ -0.17
LAMA4-201ENST00000230538 GNAI1P63096 354 aa14□□□□□ -0.17
LAMA4-201ENST00000230538 KIF7Q2M1P5 1343 aa14□□□□□ -0.17
LAMA4-201ENST00000230538 NUCB2P80303 420 aa13.99□□□□□ -0.17
LAMA4-201ENST00000230538 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.99□□□□□ -0.17
LAMA4-201ENST00000230538 CUX1P39880 1505 aa13.99□□□□□ -0.17
LAMA4-201ENST00000230538 SAFBQ15424 915 aaKnown RBP eCLIP13.99□□□□□ -0.17
LAMA4-201ENST00000230538 PANK1Q8TE04 598 aa13.99□□□□□ -0.17
LAMA4-201ENST00000230538 CCDC43Q96MW1 224 aaKnown RBP13.99□□□□□ -0.17
LAMA4-201ENST00000230538 HMOX1P09601 288 aa13.98□□□□□ -0.17
LAMA4-201ENST00000230538 TEX35Q5T0J7 233 aa13.98□□□□□ -0.17
LAMA4-201ENST00000230538 ATAD2BQ9ULI0 1458 aa13.98□□□□□ -0.17
LAMA4-201ENST00000230538 LNPKQ9C0E8 428 aa13.98□□□□□ -0.17
LAMA4-201ENST00000230538 CCDC73Q6ZRK6 1079 aa13.98□□□□□ -0.17
LAMA4-201ENST00000230538 MEX3CQ5U5Q3 659 aaKnown RBP13.98□□□□□ -0.17
LAMA4-201ENST00000230538 RIC3Q7Z5B4 369 aa13.98□□□□□ -0.17
LAMA4-201ENST00000230538 C22orf23Q9BZE7 217 aa13.97□□□□□ -0.17
LAMA4-201ENST00000230538 NEUROD6Q96NK8 337 aa13.97□□□□□ -0.17
LAMA4-201ENST00000230538 NAP1L1P55209 391 aaKnown RBP13.96□□□□□ -0.17
LAMA4-201ENST00000230538 RALYLQ86SE5 291 aaKnown RBP13.96□□□□□ -0.17
LAMA4-201ENST00000230538 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms