RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 ZFYVE9O95405 1425 aa21.19■□□□□ 0.98
SUPT4H1-201ENST00000225504 RIMS2Q9UQ26 1411 aa21.19■□□□□ 0.98
SUPT4H1-201ENST00000225504 MED14O60244 1454 aa21.18■□□□□ 0.98
SUPT4H1-201ENST00000225504 CCDC144AA2RUR9 1427 aa21.18■□□□□ 0.98
SUPT4H1-201ENST00000225504 KIF1BO60333 1816 aa21.17■□□□□ 0.98
SUPT4H1-201ENST00000225504 RGL3Q3MIN7 710 aa21.15■□□□□ 0.98
SUPT4H1-201ENST00000225504 HDGFP51858 240 aaKnown RBP21.14■□□□□ 0.98
SUPT4H1-201ENST00000225504 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.13■□□□□ 0.97
SUPT4H1-201ENST00000225504 IQGAP1P46940 1657 aa21.13■□□□□ 0.97
SUPT4H1-201ENST00000225504 ZNF335Q9H4Z2 1342 aaPredicted RBP21.13■□□□□ 0.97
SUPT4H1-201ENST00000225504 PPP1R15AO75807 674 aaPredicted RBP21.13■□□□□ 0.97
SUPT4H1-201ENST00000225504 SLC26A8Q96RN1 970 aa21.13■□□□□ 0.97
SUPT4H1-201ENST00000225504 SPATA31E1Q6ZUB1 1445 aa21.12■□□□□ 0.97
SUPT4H1-201ENST00000225504 BCANQ96GW7 911 aa21.11■□□□□ 0.97
SUPT4H1-201ENST00000225504 DHX57Q6P158 1386 aaKnown RBP21.1■□□□□ 0.97
SUPT4H1-201ENST00000225504 PLEKHG1Q9ULL1 1385 aa21.09■□□□□ 0.97
SUPT4H1-201ENST00000225504 NEXMIFQ5QGS0 1516 aa21.09■□□□□ 0.97
SUPT4H1-201ENST00000225504 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
SUPT4H1-201ENST00000225504 SIN3AQ96ST3 1273 aa21.05■□□□□ 0.96
SUPT4H1-201ENST00000225504 VGFO15240 615 aaPredicted RBP21.04■□□□□ 0.96
SUPT4H1-201ENST00000225504 LTBP4Q8N2S1 1624 aa21.04■□□□□ 0.96
SUPT4H1-201ENST00000225504 ADAMTS13Q76LX8 1427 aa21.03■□□□□ 0.96
SUPT4H1-201ENST00000225504 TBX22Q9Y458 520 aa21.02■□□□□ 0.96
SUPT4H1-201ENST00000225504 ADGRF5Q8IZF2 1346 aa21.02■□□□□ 0.96
SUPT4H1-201ENST00000225504 PPLO60437 1756 aa21.02■□□□□ 0.96
SUPT4H1-201ENST00000225504 CERKQ8TCT0 537 aa21.01■□□□□ 0.95
SUPT4H1-201ENST00000225504 STRCP1A6NGW2 1772 aa21■□□□□ 0.95
SUPT4H1-201ENST00000225504 NEUROD1Q13562 356 aa20.99■□□□□ 0.95
SUPT4H1-201ENST00000225504 NRXN3Q9Y4C0 1643 aa20.98■□□□□ 0.95
SUPT4H1-201ENST00000225504 KDM2AQ9Y2K7 1162 aa20.97■□□□□ 0.95
SUPT4H1-201ENST00000225504 IFT172Q9UG01 1749 aa20.97■□□□□ 0.95
SUPT4H1-201ENST00000225504 KCNA6P17658 529 aa20.96■□□□□ 0.95
SUPT4H1-201ENST00000225504 DCAF11Q8TEB1 546 aa20.96■□□□□ 0.95
SUPT4H1-201ENST00000225504 SETBP1Q9Y6X0 1596 aa20.96■□□□□ 0.95
SUPT4H1-201ENST00000225504 METP08581 1390 aa20.94■□□□□ 0.94
SUPT4H1-201ENST00000225504 PTPRUQ92729 1446 aa20.92■□□□□ 0.94
SUPT4H1-201ENST00000225504 RBM33Q96EV2 1170 aaKnown RBP20.92■□□□□ 0.94
SUPT4H1-201ENST00000225504 ALKQ9UM73 1620 aa20.91■□□□□ 0.94
SUPT4H1-201ENST00000225504 CHD2O14647 1828 aaKnown RBP20.91■□□□□ 0.94
SUPT4H1-201ENST00000225504 AMOTL2Q9Y2J4 779 aa20.9■□□□□ 0.94
SUPT4H1-201ENST00000225504 DIP2AQ14689 1571 aa20.89■□□□□ 0.94
SUPT4H1-201ENST00000225504 CPS1P31327 1500 aa20.89■□□□□ 0.94
SUPT4H1-201ENST00000225504 L3MBTL2Q969R5 705 aa20.89■□□□□ 0.94
SUPT4H1-201ENST00000225504 LRRC7Q96NW7 1537 aa20.89■□□□□ 0.93
SUPT4H1-201ENST00000225504 CFAP70Q5T0N1 1121 aa20.88■□□□□ 0.93
SUPT4H1-201ENST00000225504 PROSER2Q86WR7 435 aaPredicted RBP20.88■□□□□ 0.93
SUPT4H1-201ENST00000225504 PIK3C2GO75747 1445 aa20.88■□□□□ 0.93
SUPT4H1-201ENST00000225504 MYOM2P54296 1465 aa20.88■□□□□ 0.93
SUPT4H1-201ENST00000225504 NRXN1Q9ULB1 1477 aa20.88■□□□□ 0.93
SUPT4H1-201ENST00000225504 PIK3R4Q99570 1358 aa20.87■□□□□ 0.93
SUPT4H1-201ENST00000225504 SETD1AO15047 1707 aaKnown RBP20.87■□□□□ 0.93
SUPT4H1-201ENST00000225504 TMEM132EQ6IEE7 984 aa20.87■□□□□ 0.93
SUPT4H1-201ENST00000225504 C14orf93Q9H972 538 aaKnown RBP20.87■□□□□ 0.93
SUPT4H1-201ENST00000225504 NWD1Q149M9 1564 aa20.85■□□□□ 0.93
SUPT4H1-201ENST00000225504 STAC3Q96MF2 364 aa20.83■□□□□ 0.93
SUPT4H1-201ENST00000225504 TMEM94Q12767 1356 aa20.83■□□□□ 0.93
SUPT4H1-201ENST00000225504 XIRP1Q702N8 1843 aaKnown RBP20.82■□□□□ 0.92
SUPT4H1-201ENST00000225504 STK26Q9P289 416 aa20.81■□□□□ 0.92
SUPT4H1-201ENST00000225504 CCER1Q8TC90 406 aaPredicted RBP20.8■□□□□ 0.92
SUPT4H1-201ENST00000225504 NKTRP30414 1462 aaKnown RBP20.79■□□□□ 0.92
SUPT4H1-201ENST00000225504 ASXL1Q8IXJ9 1541 aa20.79■□□□□ 0.92
SUPT4H1-201ENST00000225504 XRN1Q8IZH2 1706 aaKnown RBP20.79■□□□□ 0.92
SUPT4H1-201ENST00000225504 IQSEC2Q5JU85 1478 aa20.79■□□□□ 0.92
SUPT4H1-201ENST00000225504 FBXO41Q8TF61 875 aa20.77■□□□□ 0.92
SUPT4H1-201ENST00000225504 ROBO2Q9HCK4 1378 aa20.77■□□□□ 0.92
SUPT4H1-201ENST00000225504 UBAP1LF5GYI3 381 aa20.76■□□□□ 0.91
SUPT4H1-201ENST00000225504 NBPF1Q3BBV0 1214 aa20.75■□□□□ 0.91
SUPT4H1-201ENST00000225504 PRAG1Q86YV5 1406 aa20.75■□□□□ 0.91
SUPT4H1-201ENST00000225504 ILDR1Q86SU0 546 aaPredicted RBP20.75■□□□□ 0.91
SUPT4H1-201ENST00000225504 LRPPRCP42704 1394 aaKnown RBP20.74■□□□□ 0.91
SUPT4H1-201ENST00000225504 NBPF8Q3BBV2 869 aa20.74■□□□□ 0.91
SUPT4H1-201ENST00000225504 TONSLQ96HA7 1378 aa20.74■□□□□ 0.91
SUPT4H1-201ENST00000225504 YTHDC2Q9H6S0 1430 aaKnown RBP20.74■□□□□ 0.91
SUPT4H1-201ENST00000225504 WAPLQ7Z5K2 1190 aa20.73■□□□□ 0.91
SUPT4H1-201ENST00000225504 ABCC11Q96J66 1382 aa20.73■□□□□ 0.91
SUPT4H1-201ENST00000225504 ADGRB1O14514 1584 aa20.72■□□□□ 0.91
SUPT4H1-201ENST00000225504 LAMC1P11047 1609 aa20.72■□□□□ 0.91
SUPT4H1-201ENST00000225504 C14orf37Q86TY3 774 aa20.72■□□□□ 0.91
SUPT4H1-201ENST00000225504 CLSPNQ9HAW4 1339 aa20.71■□□□□ 0.91
SUPT4H1-201ENST00000225504 PLEKHH1Q9ULM0 1364 aa20.7■□□□□ 0.9
SUPT4H1-201ENST00000225504 TOM1O60784 492 aa20.69■□□□□ 0.9
SUPT4H1-201ENST00000225504 C19orf44Q9H6X5 657 aa20.69■□□□□ 0.9
SUPT4H1-201ENST00000225504 TRAK1Q9UPV9 953 aa20.69■□□□□ 0.9
SUPT4H1-201ENST00000225504 NCOA3Q9Y6Q9 1424 aa20.69■□□□□ 0.9
SUPT4H1-201ENST00000225504 PIP4K2BP78356 416 aa20.69■□□□□ 0.9
SUPT4H1-201ENST00000225504 TECPR2O15040 1411 aa20.68■□□□□ 0.9
SUPT4H1-201ENST00000225504 PTCH1Q13635 1447 aa20.68■□□□□ 0.9
SUPT4H1-201ENST00000225504 MSH6P52701 1360 aa20.67■□□□□ 0.9
SUPT4H1-201ENST00000225504 SIRT1Q96EB6 747 aa20.66■□□□□ 0.9
SUPT4H1-201ENST00000225504 PRAM1Q96QH2 718 aa20.65■□□□□ 0.9
SUPT4H1-201ENST00000225504 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.65■□□□□ 0.9
SUPT4H1-201ENST00000225504 KIAA1210Q9ULL0 1709 aa20.65■□□□□ 0.9
SUPT4H1-201ENST00000225504 SCAF1Q9H7N4 1312 aaKnown RBP20.65■□□□□ 0.9
SUPT4H1-201ENST00000225504 SAFB2Q14151 953 aaKnown RBP eCLIP20.64■□□□□ 0.89
SUPT4H1-201ENST00000225504 KNDC1Q76NI1 1749 aa20.64■□□□□ 0.89
SUPT4H1-201ENST00000225504 SLAIN2Q9P270 581 aa20.63■□□□□ 0.89
SUPT4H1-201ENST00000225504 ATF3P18847 181 aa20.62■□□□□ 0.89
SUPT4H1-201ENST00000225504 NALCNQ8IZF0 1738 aa20.62■□□□□ 0.89
SUPT4H1-201ENST00000225504 FAM135BQ49AJ0 1406 aa20.62■□□□□ 0.89
SUPT4H1-201ENST00000225504 ADGRL3Q9HAR2 1447 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms