RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 E9PSI1 815 aa16.21■□□□□ 0.19
PITRM1-201ENST00000224949 SHANK2Q9UPX8 1470 aa16.21■□□□□ 0.19
PITRM1-201ENST00000224949 ZNF521Q96K83 1311 aa16.21■□□□□ 0.19
PITRM1-201ENST00000224949 IFT140Q96RY7 1462 aa16.21■□□□□ 0.18
PITRM1-201ENST00000224949 CDCA8Q53HL2 280 aa16.21■□□□□ 0.18
PITRM1-201ENST00000224949 FAM43AQ8N2R8 423 aa16.21■□□□□ 0.18
PITRM1-201ENST00000224949 GPRASP1Q5JY77 1395 aa16.2■□□□□ 0.18
PITRM1-201ENST00000224949 PTPRGP23470 1445 aa16.2■□□□□ 0.18
PITRM1-201ENST00000224949 PLA2R1Q13018 1463 aa16.2■□□□□ 0.18
PITRM1-201ENST00000224949 CCDC141Q6ZP82 1450 aa16.19■□□□□ 0.18
PITRM1-201ENST00000224949 TNNQ9UQP3 1299 aa16.19■□□□□ 0.18
PITRM1-201ENST00000224949 NKTRP30414 1462 aaKnown RBP16.18■□□□□ 0.18
PITRM1-201ENST00000224949 CGNL1Q0VF96 1302 aa16.18■□□□□ 0.18
PITRM1-201ENST00000224949 USP19O94966 1318 aa16.18■□□□□ 0.18
PITRM1-201ENST00000224949 RSPH6AQ9H0K4 717 aa16.18■□□□□ 0.18
PITRM1-201ENST00000224949 ABCC10Q5T3U5 1492 aa16.18■□□□□ 0.18
PITRM1-201ENST00000224949 MAPK8IP3Q9UPT6 1336 aa16.17■□□□□ 0.18
PITRM1-201ENST00000224949 EIF3AQ14152 1382 aaKnown RBP16.16■□□□□ 0.18
PITRM1-201ENST00000224949 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
PITRM1-201ENST00000224949 NAP1L5Q96NT1 182 aaPredicted RBP16.15■□□□□ 0.18
PITRM1-201ENST00000224949 PRDM15P57071 1507 aaPredicted RBP16.15■□□□□ 0.18
PITRM1-201ENST00000224949 INSRP06213 1382 aa16.15■□□□□ 0.18
PITRM1-201ENST00000224949 RRAGDQ9NQL2 400 aaPredicted RBP16.15■□□□□ 0.18
PITRM1-201ENST00000224949 ADCY10Q96PN6 1610 aa16.14■□□□□ 0.17
PITRM1-201ENST00000224949 L1TD1Q5T7N2 865 aaKnown RBP16.14■□□□□ 0.17
PITRM1-201ENST00000224949 WDR7Q9Y4E6 1490 aa16.14■□□□□ 0.17
PITRM1-201ENST00000224949 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
PITRM1-201ENST00000224949 RSPH4AQ5TD94 716 aa16.14■□□□□ 0.17
PITRM1-201ENST00000224949 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
PITRM1-201ENST00000224949 PDZRN3Q9UPQ7 1066 aa16.13■□□□□ 0.17
PITRM1-201ENST00000224949 WWC1Q8IX03 1113 aa16.13■□□□□ 0.17
PITRM1-201ENST00000224949 TBC1D2Q9BYX2 928 aa16.13■□□□□ 0.17
PITRM1-201ENST00000224949 SYCP2Q9BX26 1530 aa16.12■□□□□ 0.17
PITRM1-201ENST00000224949 PDE3AQ14432 1141 aa16.12■□□□□ 0.17
PITRM1-201ENST00000224949 PCDHB15Q9Y5E8 787 aa16.12■□□□□ 0.17
PITRM1-201ENST00000224949 ARHGAP5Q13017 1502 aa16.12■□□□□ 0.17
PITRM1-201ENST00000224949 GOLGA6L3A6NEY3 463 aa16.11■□□□□ 0.17
PITRM1-201ENST00000224949 CHGAP10645 457 aaKnown RBP16.11■□□□□ 0.17
PITRM1-201ENST00000224949 RLBP1P12271 317 aa16.11■□□□□ 0.17
PITRM1-201ENST00000224949 TRMT2AQ8IZ69 625 aaKnown RBP16.11■□□□□ 0.17
PITRM1-201ENST00000224949 PANK2Q9BZ23 570 aa16.11■□□□□ 0.17
PITRM1-201ENST00000224949 PMFBP1Q8TBY8 1022 aa16.1■□□□□ 0.17
PITRM1-201ENST00000224949 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
PITRM1-201ENST00000224949 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
PITRM1-201ENST00000224949 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
PITRM1-201ENST00000224949 MORC1Q86VD1 984 aa16.09■□□□□ 0.17
PITRM1-201ENST00000224949 ASXL1Q8IXJ9 1541 aa16.09■□□□□ 0.17
PITRM1-201ENST00000224949 FTSJ3Q8IY81 847 aaKnown RBP16.09■□□□□ 0.17
PITRM1-201ENST00000224949 SAMD9LQ8IVG5 1584 aa16.08■□□□□ 0.16
PITRM1-201ENST00000224949 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
PITRM1-201ENST00000224949 TCP11L2Q8N4U5 519 aa16.07■□□□□ 0.16
PITRM1-201ENST00000224949 CARD14Q9BXL6 1004 aa16.07■□□□□ 0.16
PITRM1-201ENST00000224949 RARSP54136 660 aaKnown RBP16.07■□□□□ 0.16
PITRM1-201ENST00000224949 TBC1D32Q96NH3 1257 aa16.06■□□□□ 0.16
PITRM1-201ENST00000224949 RWDD1Q9H446 243 aaPredicted RBP16.06■□□□□ 0.16
PITRM1-201ENST00000224949 EIF2AK4Q9P2K8 1649 aaKnown RBP16.06■□□□□ 0.16
PITRM1-201ENST00000224949 PIK3C2GO75747 1445 aa16.06■□□□□ 0.16
PITRM1-201ENST00000224949 XRCC6P12956 609 aaKnown RBP eCLIP16.06■□□□□ 0.16
PITRM1-201ENST00000224949 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
PITRM1-201ENST00000224949 MYO5CQ9NQX4 1742 aa16.05■□□□□ 0.16
PITRM1-201ENST00000224949 ABCA8O94911 1581 aa16.05■□□□□ 0.16
PITRM1-201ENST00000224949 ANTXR1Q9H6X2 564 aa16.04■□□□□ 0.16
PITRM1-201ENST00000224949 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
PITRM1-201ENST00000224949 MCM4P33991 863 aa16.04■□□□□ 0.16
PITRM1-201ENST00000224949 NUP160Q12769 1436 aa16.04■□□□□ 0.16
PITRM1-201ENST00000224949 C22orf23Q9BZE7 217 aa16.03■□□□□ 0.16
PITRM1-201ENST00000224949 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
PITRM1-201ENST00000224949 SCAF11Q99590 1463 aaKnown RBP16.03■□□□□ 0.16
PITRM1-201ENST00000224949 TRAK2O60296 914 aa16.02■□□□□ 0.15
PITRM1-201ENST00000224949 AFAP1Q8N556 730 aa16.02■□□□□ 0.15
PITRM1-201ENST00000224949 TRAK1Q9UPV9 953 aa16.02■□□□□ 0.15
PITRM1-201ENST00000224949 U2AF1L5P0DN76 240 aaPredicted RBP16.02■□□□□ 0.15
PITRM1-201ENST00000224949 U2AF1Q01081 240 aaKnown RBP eCLIP16.02■□□□□ 0.15
PITRM1-201ENST00000224949 ITPRIPQ8IWB1 547 aa16.02■□□□□ 0.15
PITRM1-201ENST00000224949 TSR2Q969E8 191 aaKnown RBP16.01■□□□□ 0.15
PITRM1-201ENST00000224949 RUNDC1Q96C34 613 aa16.01■□□□□ 0.15
PITRM1-201ENST00000224949 HSCBQ8IWL3 235 aa16.01■□□□□ 0.15
PITRM1-201ENST00000224949 SLC12A5Q9H2X9 1139 aa16.01■□□□□ 0.15
PITRM1-201ENST00000224949 HSP90AA1P07900 732 aaKnown RBP16■□□□□ 0.15
PITRM1-201ENST00000224949 SMC4Q9NTJ3 1288 aa16■□□□□ 0.15
PITRM1-201ENST00000224949 MTHFSP49914 203 aa15.99■□□□□ 0.15
PITRM1-201ENST00000224949 CHMP5Q9NZZ3 219 aa15.99■□□□□ 0.15
PITRM1-201ENST00000224949 CDC42BPBQ9Y5S2 1711 aa15.99■□□□□ 0.15
PITRM1-201ENST00000224949 U2SURPO15042 1029 aaKnown RBP15.98■□□□□ 0.15
PITRM1-201ENST00000224949 SPAG9O60271 1321 aaKnown RBP15.98■□□□□ 0.15
PITRM1-201ENST00000224949 ADGRF5Q8IZF2 1346 aa15.98■□□□□ 0.15
PITRM1-201ENST00000224949 KIF3BO15066 747 aa15.98■□□□□ 0.15
PITRM1-201ENST00000224949 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
PITRM1-201ENST00000224949 LAMC1P11047 1609 aa15.97■□□□□ 0.15
PITRM1-201ENST00000224949 DZIP1LQ8IYY4 767 aaKnown RBP15.97■□□□□ 0.15
PITRM1-201ENST00000224949 ZKSCAN2Q63HK3 967 aa15.97■□□□□ 0.15
PITRM1-201ENST00000224949 CFAP53Q96M91 514 aa15.97■□□□□ 0.15
PITRM1-201ENST00000224949 MYH16Q9H6N6 1097 aa15.97■□□□□ 0.15
PITRM1-201ENST00000224949 NINLQ9Y2I6 1382 aa15.96■□□□□ 0.15
PITRM1-201ENST00000224949 ABCC2Q92887 1545 aa15.96■□□□□ 0.15
PITRM1-201ENST00000224949 MVPQ14764 893 aaKnown RBP15.96■□□□□ 0.15
PITRM1-201ENST00000224949 SYNMO15061 1565 aa15.96■□□□□ 0.15
PITRM1-201ENST00000224949 SAFB2Q14151 953 aaKnown RBP eCLIP15.96■□□□□ 0.14
PITRM1-201ENST00000224949 TRIM44Q96DX7 344 aaPredicted RBP15.96■□□□□ 0.14
PITRM1-201ENST00000224949 NLRP1Q9C000 1473 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms