RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 ABCC10Q5T3U5 1492 aa18.41■□□□□ 0.54
SFXN3-201ENST00000224807 COL17A1Q9UMD9 1497 aaPredicted RBP18.39■□□□□ 0.53
SFXN3-201ENST00000224807 INSRP06213 1382 aa18.38■□□□□ 0.53
SFXN3-201ENST00000224807 GOLGA6L3A6NEY3 463 aa18.37■□□□□ 0.53
SFXN3-201ENST00000224807 ZMYM4Q5VZL5 1548 aa18.37■□□□□ 0.53
SFXN3-201ENST00000224807 FAM135AQ9P2D6 1515 aa18.37■□□□□ 0.53
SFXN3-201ENST00000224807 TESK2Q96S53 571 aa18.37■□□□□ 0.53
SFXN3-201ENST00000224807 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
SFXN3-201ENST00000224807 GPRASP1Q5JY77 1395 aa18.36■□□□□ 0.53
SFXN3-201ENST00000224807 MAGI1Q96QZ7 1491 aaPredicted RBP18.35■□□□□ 0.53
SFXN3-201ENST00000224807 EIF4G3O43432 1585 aaKnown RBP18.35■□□□□ 0.53
SFXN3-201ENST00000224807 CCDC144AA2RUR9 1427 aa18.35■□□□□ 0.53
SFXN3-201ENST00000224807 ZBTB7CA1YPR0 619 aa18.34■□□□□ 0.53
SFXN3-201ENST00000224807 XRCC6P12956 609 aaKnown RBP eCLIP18.34■□□□□ 0.53
SFXN3-201ENST00000224807 SLFN5Q08AF3 891 aa18.34■□□□□ 0.53
SFXN3-201ENST00000224807 PLEKHH2Q8IVE3 1493 aa18.34■□□□□ 0.53
SFXN3-201ENST00000224807 TBC1D2Q9BYX2 928 aa18.34■□□□□ 0.53
SFXN3-201ENST00000224807 PKNOX2Q96KN3 472 aa18.33■□□□□ 0.53
SFXN3-201ENST00000224807 A2MP01023 1474 aa18.33■□□□□ 0.52
SFXN3-201ENST00000224807 PRDM15P57071 1507 aaPredicted RBP18.33■□□□□ 0.52
SFXN3-201ENST00000224807 USP19O94966 1318 aa18.32■□□□□ 0.52
SFXN3-201ENST00000224807 CENPJQ9HC77 1338 aaPredicted RBP18.32■□□□□ 0.52
SFXN3-201ENST00000224807 ATP10BO94823 1461 aa18.32■□□□□ 0.52
SFXN3-201ENST00000224807 ABCA8O94911 1581 aa18.32■□□□□ 0.52
SFXN3-201ENST00000224807 L1TD1Q5T7N2 865 aaKnown RBP18.31■□□□□ 0.52
SFXN3-201ENST00000224807 CARMIL2Q6F5E8 1435 aa18.31■□□□□ 0.52
SFXN3-201ENST00000224807 ERBINQ96RT1 1412 aa18.31■□□□□ 0.52
SFXN3-201ENST00000224807 PLA2R1Q13018 1463 aa18.31■□□□□ 0.52
SFXN3-201ENST00000224807 ARHGEF5Q12774 1597 aa18.31■□□□□ 0.52
SFXN3-201ENST00000224807 HSP90AA2PQ14568 343 aaPredicted RBP18.3■□□□□ 0.52
SFXN3-201ENST00000224807 PDZRN3Q9UPQ7 1066 aa18.3■□□□□ 0.52
SFXN3-201ENST00000224807 LAMC1P11047 1609 aa18.3■□□□□ 0.52
SFXN3-201ENST00000224807 HSP90AA1P07900 732 aaKnown RBP18.29■□□□□ 0.52
SFXN3-201ENST00000224807 JPH4Q96JJ6 628 aa18.29■□□□□ 0.52
SFXN3-201ENST00000224807 PCDHB15Q9Y5E8 787 aa18.29■□□□□ 0.52
SFXN3-201ENST00000224807 RLBP1P12271 317 aa18.28■□□□□ 0.52
SFXN3-201ENST00000224807 CHGAP10645 457 aaKnown RBP18.27■□□□□ 0.52
SFXN3-201ENST00000224807 CCDC141Q6ZP82 1450 aa18.26■□□□□ 0.51
SFXN3-201ENST00000224807 GLIPR1L2Q4G1C9 344 aa18.26■□□□□ 0.51
SFXN3-201ENST00000224807 TRAK2O60296 914 aa18.26■□□□□ 0.51
SFXN3-201ENST00000224807 SAMD9LQ8IVG5 1584 aa18.25■□□□□ 0.51
SFXN3-201ENST00000224807 TRIM44Q96DX7 344 aaPredicted RBP18.25■□□□□ 0.51
SFXN3-201ENST00000224807 ZMYND15Q9H091 742 aa18.25■□□□□ 0.51
SFXN3-201ENST00000224807 MYO5CQ9NQX4 1742 aa18.25■□□□□ 0.51
SFXN3-201ENST00000224807 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
SFXN3-201ENST00000224807 MCM4P33991 863 aa18.24■□□□□ 0.51
SFXN3-201ENST00000224807 FTSJ3Q8IY81 847 aaKnown RBP18.24■□□□□ 0.51
SFXN3-201ENST00000224807 ZNF521Q96K83 1311 aa18.23■□□□□ 0.51
SFXN3-201ENST00000224807 MYH16Q9H6N6 1097 aa18.23■□□□□ 0.51
SFXN3-201ENST00000224807 MAGI2Q86UL8 1455 aa18.23■□□□□ 0.51
SFXN3-201ENST00000224807 E9PSI1 815 aa18.22■□□□□ 0.51
SFXN3-201ENST00000224807 AMER1Q5JTC6 1135 aaPredicted RBP18.22■□□□□ 0.51
SFXN3-201ENST00000224807 EIF2AK4Q9P2K8 1649 aaKnown RBP18.22■□□□□ 0.51
SFXN3-201ENST00000224807 UNC13BO14795 1591 aa18.21■□□□□ 0.51
SFXN3-201ENST00000224807 NUP160Q12769 1436 aa18.21■□□□□ 0.51
SFXN3-201ENST00000224807 CDC42BPBQ9Y5S2 1711 aa18.21■□□□□ 0.51
SFXN3-201ENST00000224807 WDR7Q9Y4E6 1490 aa18.2■□□□□ 0.5
SFXN3-201ENST00000224807 NCLP19338 710 aaKnown RBP18.2■□□□□ 0.5
SFXN3-201ENST00000224807 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
SFXN3-201ENST00000224807 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
SFXN3-201ENST00000224807 TPRNQ4KMQ1 711 aa18.19■□□□□ 0.5
SFXN3-201ENST00000224807 C22orf23Q9BZE7 217 aa18.19■□□□□ 0.5
SFXN3-201ENST00000224807 TSR2Q969E8 191 aaKnown RBP18.19■□□□□ 0.5
SFXN3-201ENST00000224807 ITPRIPQ8IWB1 547 aa18.18■□□□□ 0.5
SFXN3-201ENST00000224807 PREX2Q70Z35 1606 aa18.18■□□□□ 0.5
SFXN3-201ENST00000224807 WWC1Q8IX03 1113 aa18.17■□□□□ 0.5
SFXN3-201ENST00000224807 SAFB2Q14151 953 aaKnown RBP eCLIP18.17■□□□□ 0.5
SFXN3-201ENST00000224807 HSCBQ8IWL3 235 aa18.17■□□□□ 0.5
SFXN3-201ENST00000224807 RNF17Q9BXT8 1623 aaKnown RBP18.17■□□□□ 0.5
SFXN3-201ENST00000224807 TBC1D32Q96NH3 1257 aa18.17■□□□□ 0.5
SFXN3-201ENST00000224807 SYCP2Q9BX26 1530 aa18.16■□□□□ 0.5
SFXN3-201ENST00000224807 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
SFXN3-201ENST00000224807 RBM10P98175 930 aaKnown RBP18.16■□□□□ 0.5
SFXN3-201ENST00000224807 ANTXR1Q9H6X2 564 aa18.16■□□□□ 0.5
SFXN3-201ENST00000224807 RSPH4AQ5TD94 716 aa18.16■□□□□ 0.5
SFXN3-201ENST00000224807 IQGAP3Q86VI3 1631 aa18.15■□□□□ 0.5
SFXN3-201ENST00000224807 TCP11L2Q8N4U5 519 aa18.15■□□□□ 0.5
SFXN3-201ENST00000224807 MORC1Q86VD1 984 aa18.14■□□□□ 0.5
SFXN3-201ENST00000224807 CLASP1Q7Z460 1538 aa18.14■□□□□ 0.49
SFXN3-201ENST00000224807 U2SURPO15042 1029 aaKnown RBP18.14■□□□□ 0.49
SFXN3-201ENST00000224807 LNPKQ9C0E8 428 aa18.14■□□□□ 0.49
SFXN3-201ENST00000224807 GRPEL1Q9HAV7 217 aa18.14■□□□□ 0.49
SFXN3-201ENST00000224807 NUTM2DQ5VT03 806 aaPredicted RBP18.13■□□□□ 0.49
SFXN3-201ENST00000224807 TRMT2AQ8IZ69 625 aaKnown RBP18.13■□□□□ 0.49
SFXN3-201ENST00000224807 RWDD1Q9H446 243 aaPredicted RBP18.13■□□□□ 0.49
SFXN3-201ENST00000224807 NKTRP30414 1462 aaKnown RBP18.13■□□□□ 0.49
SFXN3-201ENST00000224807 U2AF1L5P0DN76 240 aaPredicted RBP18.13■□□□□ 0.49
SFXN3-201ENST00000224807 U2AF1Q01081 240 aaKnown RBP eCLIP18.13■□□□□ 0.49
SFXN3-201ENST00000224807 CFAP70Q5T0N1 1121 aa18.13■□□□□ 0.49
SFXN3-201ENST00000224807 PMFBP1Q8TBY8 1022 aa18.13■□□□□ 0.49
SFXN3-201ENST00000224807 ERBB4Q15303 1308 aa18.13■□□□□ 0.49
SFXN3-201ENST00000224807 MAST1Q9Y2H9 1570 aa18.12■□□□□ 0.49
SFXN3-201ENST00000224807 RARSP54136 660 aaKnown RBP18.12■□□□□ 0.49
SFXN3-201ENST00000224807 CHMP5Q9NZZ3 219 aa18.12■□□□□ 0.49
SFXN3-201ENST00000224807 ESPNB1AK53 854 aa18.12■□□□□ 0.49
SFXN3-201ENST00000224807 SMC4Q9NTJ3 1288 aa18.12■□□□□ 0.49
SFXN3-201ENST00000224807 ATP10AO60312 1499 aa18.11■□□□□ 0.49
SFXN3-201ENST00000224807 EIF3AQ14152 1382 aaKnown RBP18.11■□□□□ 0.49
SFXN3-201ENST00000224807 PDE3AQ14432 1141 aa18.1■□□□□ 0.49
SFXN3-201ENST00000224807 PIK3C2GO75747 1445 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms