RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 HSP90AB2PQ58FF8 381 aa22.01■■□□□ 1.11
CDK13-201ENST00000181839 DIAPH3Q9NSV4 1193 aa22.01■■□□□ 1.11
CDK13-201ENST00000181839 BECN2A8MW95 431 aa22.01■■□□□ 1.11
CDK13-201ENST00000181839 CCDC70Q6NSX1 233 aa22■■□□□ 1.11
CDK13-201ENST00000181839 CCDC47Q96A33 483 aaKnown RBP22■■□□□ 1.11
CDK13-201ENST00000181839 MINK1Q8N4C8 1332 aaPredicted RBP22■■□□□ 1.11
CDK13-201ENST00000181839 CPLX1O14810 134 aa21.99■■□□□ 1.11
CDK13-201ENST00000181839 EFCAB2Q5VUJ9 269 aa21.99■■□□□ 1.11
CDK13-201ENST00000181839 PHF14O94880 888 aa21.98■■□□□ 1.11
CDK13-201ENST00000181839 RRP12Q5JTH9 1297 aaKnown RBP21.98■■□□□ 1.11
CDK13-201ENST00000181839 TRDNQ13061 729 aa21.97■■□□□ 1.11
CDK13-201ENST00000181839 PAXIP1Q6ZW49 1069 aaPredicted RBP21.97■■□□□ 1.11
CDK13-201ENST00000181839 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.97■■□□□ 1.114e-6■□□□□ 10.4
CDK13-201ENST00000181839 DCAF1Q9Y4B6 1507 aa21.97■■□□□ 1.11
CDK13-201ENST00000181839 IFIT2P09913 472 aaKnown RBP21.97■■□□□ 1.11
CDK13-201ENST00000181839 NEUROD6Q96NK8 337 aa21.97■■□□□ 1.11
CDK13-201ENST00000181839 STRN4Q9NRL3 753 aa21.97■■□□□ 1.11
CDK13-201ENST00000181839 GOLGA6L3A6NEY3 463 aa21.96■■□□□ 1.11
CDK13-201ENST00000181839 CENPJQ9HC77 1338 aaPredicted RBP21.95■■□□□ 1.11
CDK13-201ENST00000181839 WRNQ14191 1432 aaPredicted RBP eCLIP21.95■■□□□ 1.1
CDK13-201ENST00000181839 CHMP4BP1P59074 171 aa21.95■■□□□ 1.1
CDK13-201ENST00000181839 MYCNP04198 464 aaPredicted RBP21.95■■□□□ 1.1
CDK13-201ENST00000181839 RBM5P52756 815 aaKnown RBP eCLIP21.94■■□□□ 1.1
CDK13-201ENST00000181839 CARMIL2Q6F5E8 1435 aa21.93■■□□□ 1.1
CDK13-201ENST00000181839 LRRFIP1Q32MZ4 808 aaKnown RBP21.93■■□□□ 1.1
CDK13-201ENST00000181839 WASHC4Q2M389 1173 aa21.92■■□□□ 1.1
CDK13-201ENST00000181839 CCDC97Q96F63 343 aaPredicted RBP21.92■■□□□ 1.1
CDK13-201ENST00000181839 CUX2O14529 1486 aa21.92■■□□□ 1.1
CDK13-201ENST00000181839 CPLX2Q6PUV4 134 aaKnown RBP21.92■■□□□ 1.1
CDK13-201ENST00000181839 TTLL5Q6EMB2 1281 aa21.91■■□□□ 1.1
CDK13-201ENST00000181839 IPO7O95373 1038 aaKnown RBP21.91■■□□□ 1.1
CDK13-201ENST00000181839 RIC3Q7Z5B4 369 aa21.91■■□□□ 1.1
CDK13-201ENST00000181839 RBM42Q9BTD8 480 aaKnown RBP21.91■■□□□ 1.1
CDK13-201ENST00000181839 ANKRD20A12PQ8NF67 263 aa21.89■■□□□ 1.1
CDK13-201ENST00000181839 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
CDK13-201ENST00000181839 NLRP2Q9NX02 1062 aa21.88■■□□□ 1.09
CDK13-201ENST00000181839 CHMP4CQ96CF2 233 aa21.87■■□□□ 1.09
CDK13-201ENST00000181839 G3BP1Q13283 466 aaKnown RBP eCLIP21.87■■□□□ 1.09
CDK13-201ENST00000181839 EEA1Q15075 1411 aa21.86■■□□□ 1.09
CDK13-201ENST00000181839 BICD2Q8TD16 824 aa21.86■■□□□ 1.09
CDK13-201ENST00000181839 SPDYE4A6NLX3 237 aa21.85■■□□□ 1.09
CDK13-201ENST00000181839 HOMER1Q86YM7 354 aa21.85■■□□□ 1.09
CDK13-201ENST00000181839 MPHOSPH9Q99550 1183 aa21.85■■□□□ 1.09
CDK13-201ENST00000181839 DDX58O95786 925 aaKnown RBP21.85■■□□□ 1.09
CDK13-201ENST00000181839 RAPGEF4Q8WZA2 1011 aa21.84■■□□□ 1.09
CDK13-201ENST00000181839 CARMIL1Q5VZK9 1371 aa21.83■■□□□ 1.09
CDK13-201ENST00000181839 FKBP5Q13451 457 aaPredicted RBP21.82■■□□□ 1.08
CDK13-201ENST00000181839 HOOK1Q9UJC3 728 aaKnown RBP21.81■■□□□ 1.08
CDK13-201ENST00000181839 FHAD1B1AJZ9 1412 aa21.81■■□□□ 1.08
CDK13-201ENST00000181839 MATR3P43243 847 aaKnown RBP eCLIP21.81■■□□□ 1.083e-6■■□□□ 12.9
CDK13-201ENST00000181839 OFD1O75665 1012 aa21.8■■□□□ 1.08
CDK13-201ENST00000181839 HMOX1P09601 288 aa21.8■■□□□ 1.08
CDK13-201ENST00000181839 RALBP1Q15311 655 aa21.8■■□□□ 1.08
CDK13-201ENST00000181839 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
CDK13-201ENST00000181839 VPS37CA5D8V6 355 aaPredicted RBP21.79■■□□□ 1.08
CDK13-201ENST00000181839 PDILTQ8N807 584 aa21.79■■□□□ 1.08
CDK13-201ENST00000181839 RUFY1Q96T51 708 aa21.79■■□□□ 1.08
CDK13-201ENST00000181839 ATP2B1P20020 1258 aa21.78■■□□□ 1.08
CDK13-201ENST00000181839 RUFY2Q8WXA3 655 aa21.78■■□□□ 1.08
CDK13-201ENST00000181839 KIF6Q6ZMV9 814 aa21.78■■□□□ 1.08
CDK13-201ENST00000181839 MPHOSPH10O00566 681 aaKnown RBP21.77■■□□□ 1.08
CDK13-201ENST00000181839 SAFBQ15424 915 aaKnown RBP eCLIP21.77■■□□□ 1.08
CDK13-201ENST00000181839 DHX37Q8IY37 1157 aaKnown RBP21.77■■□□□ 1.08
CDK13-201ENST00000181839 TSPYL4Q9UJ04 414 aa21.77■■□□□ 1.08
CDK13-201ENST00000181839 DDX49Q9Y6V7 483 aaKnown RBP21.77■■□□□ 1.08
CDK13-201ENST00000181839 ZKSCAN1P17029 563 aaPredicted RBP21.77■■□□□ 1.08
CDK13-201ENST00000181839 PLCD3Q8N3E9 789 aa21.77■■□□□ 1.08
CDK13-201ENST00000181839 ANKRD30AQ9BXX3 1397 aa21.76■■□□□ 1.07
CDK13-201ENST00000181839 AK7Q96M32 723 aa21.76■■□□□ 1.07
CDK13-201ENST00000181839 ZHX3Q9H4I2 956 aa21.76■■□□□ 1.07
CDK13-201ENST00000181839 CDK5RAP3Q96JB5 506 aa21.76■■□□□ 1.07
CDK13-201ENST00000181839 RALYLQ86SE5 291 aaKnown RBP21.76■■□□□ 1.07
CDK13-201ENST00000181839 BRMS1Q9HCU9 246 aa21.75■■□□□ 1.07
CDK13-201ENST00000181839 ANKRD62A6NC57 917 aa21.75■■□□□ 1.07
CDK13-201ENST00000181839 KRT18P05783 430 aaKnown RBP21.75■■□□□ 1.07
CDK13-201ENST00000181839 GPS2Q13227 327 aa21.74■■□□□ 1.07
CDK13-201ENST00000181839 FAM69CQ0P6D2 419 aa21.74■■□□□ 1.07
CDK13-201ENST00000181839 PANK3Q9H999 370 aa21.74■■□□□ 1.07
CDK13-201ENST00000181839 FAM161AQ3B820 660 aa21.73■■□□□ 1.07
CDK13-201ENST00000181839 DNAJC2Q99543 621 aaKnown RBP21.73■■□□□ 1.07
CDK13-201ENST00000181839 BRPF1P55201 1214 aaPredicted RBP21.72■■□□□ 1.07
CDK13-201ENST00000181839 CAGE1Q8TC20 777 aa21.72■■□□□ 1.07
CDK13-201ENST00000181839 DDX54Q8TDD1 881 aaKnown RBP21.72■■□□□ 1.07
CDK13-201ENST00000181839 ZSCAN29Q8IWY8 852 aaPredicted RBP21.72■■□□□ 1.07
CDK13-201ENST00000181839 ESCO1Q5FWF5 840 aa21.72■■□□□ 1.07
CDK13-201ENST00000181839 ZNF771Q7L3S4 317 aaPredicted RBP21.72■■□□□ 1.07
CDK13-201ENST00000181839 EVC2Q86UK5 1308 aa21.72■■□□□ 1.07
CDK13-201ENST00000181839 SETD5Q9C0A6 1442 aa21.71■■□□□ 1.07
CDK13-201ENST00000181839 SYCP1Q15431 976 aa21.71■■□□□ 1.07
CDK13-201ENST00000181839 NEFHP12036 1026 aa21.71■■□□□ 1.07
CDK13-201ENST00000181839 RBM19Q9Y4C8 960 aaKnown RBP21.71■■□□□ 1.07
CDK13-201ENST00000181839 CALRP27797 417 aaKnown RBP21.7■■□□□ 1.06
CDK13-201ENST00000181839 PRDM2Q13029 1718 aa21.7■■□□□ 1.06
CDK13-201ENST00000181839 BICDL1Q6ZP65 573 aa21.7■■□□□ 1.06
CDK13-201ENST00000181839 ATP6V1DQ9Y5K8 247 aa21.7■■□□□ 1.06
CDK13-201ENST00000181839 WASHC2AQ641Q2 1341 aa21.69■■□□□ 1.06
CDK13-201ENST00000181839 CGNL1Q0VF96 1302 aa21.69■■□□□ 1.06
CDK13-201ENST00000181839 CNNM1Q9NRU3 951 aa21.69■■□□□ 1.06
CDK13-201ENST00000181839 RIPK4P57078 832 aa21.68■■□□□ 1.06
CDK13-201ENST00000181839 SPINK5Q9NQ38 1064 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms