RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 PhaxQ9JJT9 385 aaKnown RBP21.07■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Ccdc43Q9CR29 222 aaKnown RBP21.07■□□□□ 0.96
Shroom3-211ENSMUST00000225438 CrcpO35427 148 aa21.07■□□□□ 0.96
Shroom3-211ENSMUST00000225438 ErbinQ80TH2 1402 aa21.07■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Rfx1P48377 963 aa21.07■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Ccp110Q7TSH4 1004 aa21.07■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Mre11Q61216 706 aa21.06■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Bicd2Q921C5 820 aa21.06■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Q8C5K5 320 aa21.06■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Esx1O88933 382 aa21.06■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Pabpn1Q8CCS6 302 aaKnown RBP21.05■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Usp16Q99LG0 825 aa21.05■□□□□ 0.96
Shroom3-211ENSMUST00000225438 LrpprcQ6PB66 1392 aaKnown RBP21.05■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Neurod6P48986 337 aa21.05■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Drc7Q6V3W6 876 aa21.05■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Ric3Q8BPM6 367 aa21.04■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Dapk1Q80YE7 1442 aa21.04■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Gnai1B2RSH2 354 aa21.04■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Hook1Q8BIL5 728 aa21.04■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Gnai3Q9DC51 354 aa21.04■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Polr3gQ6NXY9 223 aa21.03■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Kif16bB1AVY7 1312 aa21.03■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Phactr2B1AVP0 632 aa21.03■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Chrna2Q91X60 512 aa21.03■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Arid4aF8VPQ2 1261 aaKnown RBP21.03■□□□□ 0.96
Shroom3-211ENSMUST00000225438 NexnQ7TPW1 607 aa21.03■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Erc2Q6PH08 957 aa21.02■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Cc2d2bA0A286YDU8 1405 aa21.02■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Gsto1O09131 240 aa21.01■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Smc3Q9CW03 1217 aaKnown RBP21.01■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Kif4P33174 1231 aa21.01■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Sycp2Q9CUU3 1500 aa21■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Soga1E1U8D0 1418 aa21■□□□□ 0.95
Shroom3-211ENSMUST00000225438 UvssaQ9D479 717 aa21■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Ak7Q9D2H2 614 aa21■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Gripap1Q8VD04 806 aa20.99■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Ncoa2Q61026 1462 aa20.99■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Eva1cP58659 440 aa20.99■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Gprasp1Q5U4C1 1347 aa20.99■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Ccdc34Q3UI66 367 aa20.99■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Q9D2X8 372 aa20.99■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Bcl11bQ99PV8 884 aa20.98■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Ttll5Q8CHB8 1328 aa20.98■□□□□ 0.95
Shroom3-211ENSMUST00000225438 PnisrA2AJT4 805 aaKnown RBP20.98■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Tdrd9Q14BI7 1383 aa20.97■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Prm3Q62100 101 aa20.97■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Cfdp1O88271 295 aaKnown RBP20.97■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Swt1Q9DBQ9 907 aa20.97■□□□□ 0.95
Shroom3-211ENSMUST00000225438 March6Q6ZQ89 909 aa20.96■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Nsd2Q8BVE8 1365 aa20.96■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Jph4Q80WT0 628 aa20.96■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Rabep1O35551 862 aa20.96■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Gpatch3Q8BIY1 525 aa20.95■□□□□ 0.95
Shroom3-211ENSMUST00000225438 Dhx29Q6PGC1 1365 aaKnown RBP20.95■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Hmox1P14901 289 aa20.95■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Atl3Q91YH5 541 aa20.95■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Fam193aQ8CGI1 1231 aaKnown RBP20.95■□□□□ 0.94
Shroom3-211ENSMUST00000225438 BcanQ61361 883 aa20.94■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Ccdc30Q8BVF4 654 aa20.94■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Kif3aP28741 701 aa20.94■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Hmgn5Q9JL35 406 aa20.93■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Trim29Q8R2Q0 587 aa20.93■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Sirt1Q923E4 737 aa20.93■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Gnl3lQ6PGG6 577 aaKnown RBP20.93■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Rbm25B2RY56 838 aaKnown RBP20.93■□□□□ 0.94
Shroom3-211ENSMUST00000225438 TatQ8QZR1 454 aa20.93■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Cetn4Q8K4K1 168 aa20.92■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Zpr1Q62384 459 aa20.92■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Sv2bQ8BG39 683 aa20.92■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Atf3Q60765 181 aa20.92■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Taok2Q6ZQ29 1240 aa20.92■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Taf3Q5HZG4 932 aa20.91■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Cchcr1Q8K2I2 770 aa20.91■□□□□ 0.94
Shroom3-211ENSMUST00000225438 FanciQ8K368 1330 aa20.91■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Me1P06801 572 aa20.91■□□□□ 0.94
Shroom3-211ENSMUST00000225438 FosbP13346 338 aa20.9■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Paf1Q8K2T8 535 aa20.9■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Shroom4Q1W617 1475 aa20.9■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Atad2bE9Q166 1460 aaKnown RBP20.9■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Wdr78E9PYY5 807 aa20.89■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Necab1Q8BG18 352 aa20.89■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Hnrnpul1Q8VDM6 859 aaKnown RBP20.89■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Cfap99A0A140LIX9 648 aa20.89■□□□□ 0.94
Shroom3-211ENSMUST00000225438 Zrsr2Q62377 462 aaKnown RBP20.89■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Mad1l1Q9WTX8 717 aaKnown RBP20.88■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Nectin2P32507 530 aa20.88■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Znhit6Q3UFB2 460 aaKnown RBP20.88■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Chmp4cQ9D7F7 232 aa20.88■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Bcl2l13P59017 434 aa20.87■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Puf60Q3UEB3 564 aaKnown RBP20.87■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Lrrcc1Q69ZB0 1026 aa20.87■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Cyp46a1Q9WVK8 500 aa20.87■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Gcom1E9PZ54 550 aa20.87■□□□□ 0.93
Shroom3-211ENSMUST00000225438 MyzapQ3UIJ9 466 aa20.87■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Gm10471E9Q1C7 252 aa20.87■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Mphosph10Q810V0 681 aaKnown RBP20.86■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Psma5Q9Z2U1 241 aaKnown RBP20.86■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Atp2b2Q9R0K7 1198 aa20.86■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Cecr2E9Q2Z1 1453 aa20.85■□□□□ 0.93
Shroom3-211ENSMUST00000225438 Rpgrip1lQ8CG73 1264 aa20.85■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms