RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Abca8aQ8K442 1620 aa28.71■■■□□ 2.19
Trim27-207ENSMUST00000223065 Calr4Q3TQS0 420 aa28.71■■■□□ 2.19
Trim27-207ENSMUST00000223065 Pank3Q8R2W9 370 aa28.7■■■□□ 2.19
Trim27-207ENSMUST00000223065 Cdc42bpgQ80UW5 1551 aa28.69■■■□□ 2.18
Trim27-207ENSMUST00000223065 Cep152A2AUM9 1736 aaKnown RBP28.68■■■□□ 2.18
Trim27-207ENSMUST00000223065 Anp32bQ9EST5 272 aaKnown RBP28.67■■■□□ 2.18
Trim27-207ENSMUST00000223065 Sbno1Q689Z5 1390 aa28.67■■■□□ 2.18
Trim27-207ENSMUST00000223065 AatkQ80YE4 1365 aa28.67■■■□□ 2.18
Trim27-207ENSMUST00000223065 Pola1P33609 1465 aa28.67■■■□□ 2.18
Trim27-207ENSMUST00000223065 Gm20521D3Z5F7 333 aa28.65■■■□□ 2.18
Trim27-207ENSMUST00000223065 Rims1Q99NE5 1463 aa28.63■■■□□ 2.17
Trim27-207ENSMUST00000223065 Rpgrip1lQ8CG73 1264 aa28.63■■■□□ 2.17
Trim27-207ENSMUST00000223065 Inpp5dQ9ES52 1191 aa28.63■■■□□ 2.17
Trim27-207ENSMUST00000223065 Kiaa0556Q8C753 1610 aa28.63■■■□□ 2.17
Trim27-207ENSMUST00000223065 Adgrb3Q80ZF8 1522 aa28.63■■■□□ 2.17
Trim27-207ENSMUST00000223065 Tmf1B9EKI3 1091 aa28.62■■■□□ 2.17
Trim27-207ENSMUST00000223065 Eif5bQ05D44 1216 aaKnown RBP28.62■■■□□ 2.17
Trim27-207ENSMUST00000223065 Dip2cE9PWR4 1557 aa28.61■■■□□ 2.17
Trim27-207ENSMUST00000223065 RereQ80TZ9 1558 aa28.61■■■□□ 2.17
Trim27-207ENSMUST00000223065 Os9Q8K2C7 672 aa28.61■■■□□ 2.17
Trim27-207ENSMUST00000223065 Trpm1Q2TV84 1622 aa28.6■■■□□ 2.17
Trim27-207ENSMUST00000223065 Arid4bA2CG63 1314 aaKnown RBP28.6■■■□□ 2.17
Trim27-207ENSMUST00000223065 Stard8Q8K031 1019 aa28.6■■■□□ 2.17
Trim27-207ENSMUST00000223065 Ehbp1l1Q99MS7 1716 aa28.6■■■□□ 2.17
Trim27-207ENSMUST00000223065 Zscan10Q3URR7 782 aa28.59■■■□□ 2.17
Trim27-207ENSMUST00000223065 Tecpr2Q3UH45 1423 aa28.59■■■□□ 2.17
Trim27-207ENSMUST00000223065 Srpk2O54781 681 aaKnown RBP28.59■■■□□ 2.17
Trim27-207ENSMUST00000223065 Ofd1Q80Z25 1017 aa28.58■■■□□ 2.17
Trim27-207ENSMUST00000223065 Akap12Q9WTQ5 1684 aa28.57■■■□□ 2.16
Trim27-207ENSMUST00000223065 Myo3aQ8K3H5 1613 aa28.57■■■□□ 2.16
Trim27-207ENSMUST00000223065 Efcab6Q6P1E8 1516 aa28.57■■■□□ 2.16
Trim27-207ENSMUST00000223065 Dnajc5gQ8C632 165 aa28.56■■■□□ 2.16
Trim27-207ENSMUST00000223065 Gtf2e1Q9D0D5 440 aa28.55■■■□□ 2.16
Trim27-207ENSMUST00000223065 Zscan21Q07231 555 aa28.55■■■□□ 2.16
Trim27-207ENSMUST00000223065 Zmym4A2A791 1549 aaKnown RBP28.55■■■□□ 2.16
Trim27-207ENSMUST00000223065 Myom2Q14BI5 1463 aa28.54■■■□□ 2.16
Trim27-207ENSMUST00000223065 Slc4a1apE9PX68 744 aa28.53■■■□□ 2.16
Trim27-207ENSMUST00000223065 Fan1Q69ZT1 1020 aa28.53■■■□□ 2.16
Trim27-207ENSMUST00000223065 Itsn2Q9Z0R6 1659 aa28.53■■■□□ 2.16
Trim27-207ENSMUST00000223065 Plppr3Q7TPB0 716 aa28.53■■■□□ 2.16
Trim27-207ENSMUST00000223065 Usp40Q8BWR4 1235 aa28.52■■■□□ 2.16
Trim27-207ENSMUST00000223065 Gm16486A0A1D5RMD1 1434 aa28.52■■■□□ 2.16
Trim27-207ENSMUST00000223065 Nphp4P59240 1425 aa28.51■■■□□ 2.15
Trim27-207ENSMUST00000223065 Fam184bQ0KK56 942 aa28.51■■■□□ 2.15
Trim27-207ENSMUST00000223065 Prdm2A2A7B5 1709 aaKnown RBP28.51■■■□□ 2.15
Trim27-207ENSMUST00000223065 Cdk5rap2Q8K389 1822 aa28.51■■■□□ 2.15
Trim27-207ENSMUST00000223065 Ino80Q6ZPV2 1559 aa28.5■■■□□ 2.15
Trim27-207ENSMUST00000223065 Q7TT23 1179 aa28.5■■■□□ 2.15
Trim27-207ENSMUST00000223065 Cul9Q80TT8 1865 aa28.48■■■□□ 2.15
Trim27-207ENSMUST00000223065 Talpid3E9PV87 1520 aa28.48■■■□□ 2.15
Trim27-207ENSMUST00000223065 P3h3Q8CG70 732 aa28.47■■■□□ 2.15
Trim27-207ENSMUST00000223065 Yeats2Q3TUF7 1407 aa28.46■■■□□ 2.15
Trim27-207ENSMUST00000223065 Tex14Q7M6U3 1450 aa28.44■■■□□ 2.14
Trim27-207ENSMUST00000223065 Puf60Q3UEB3 564 aaKnown RBP28.43■■■□□ 2.14
Trim27-207ENSMUST00000223065 DnmbpQ6TXD4 1580 aa28.43■■■□□ 2.14
Trim27-207ENSMUST00000223065 Mak16Q8BGS0 296 aaKnown RBP28.42■■■□□ 2.14
Trim27-207ENSMUST00000223065 Adamts7Q68SA9 1657 aa28.41■■■□□ 2.14
Trim27-207ENSMUST00000223065 AU022751B1B0V2 589 aa28.4■■■□□ 2.14
Trim27-207ENSMUST00000223065 Uggt1Q6P5E4 1551 aa28.4■■■□□ 2.14
Trim27-207ENSMUST00000223065 Sipa1l1Q8C0T5 1782 aa28.39■■■□□ 2.14
Trim27-207ENSMUST00000223065 Synj2Q9D2G5 1434 aa28.38■■■□□ 2.13
Trim27-207ENSMUST00000223065 Knl1Q66JQ7 1612 aa28.38■■■□□ 2.13
Trim27-207ENSMUST00000223065 Ppp2r1aQ76MZ3 589 aa28.36■■■□□ 2.13
Trim27-207ENSMUST00000223065 Mroh1E0CZ22 1640 aa28.36■■■□□ 2.13
Trim27-207ENSMUST00000223065 L3mbtl2P59178 703 aa28.35■■■□□ 2.13
Trim27-207ENSMUST00000223065 Plxnc1Q9QZC2 1574 aa28.35■■■□□ 2.13
Trim27-207ENSMUST00000223065 Anp32aO35381 247 aa28.35■■■□□ 2.13
Trim27-207ENSMUST00000223065 Cfap65Q3V0B4 1847 aa28.34■■■□□ 2.13
Trim27-207ENSMUST00000223065 Rab3gap2Q8BMG7 1366 aa28.33■■■□□ 2.13
Trim27-207ENSMUST00000223065 Kdm5aQ3UXZ9 1690 aa28.32■■■□□ 2.12
Trim27-207ENSMUST00000223065 Slc52a2Q9D8F3 450 aa28.31■■■□□ 2.12
Trim27-207ENSMUST00000223065 Skint5A7XUY5 1461 aa28.31■■■□□ 2.12
Trim27-207ENSMUST00000223065 Hecw2Q6I6G8 1578 aa28.3■■■□□ 2.12
Trim27-207ENSMUST00000223065 Zfp444Q3TDV8 331 aaKnown RBP28.3■■■□□ 2.12
Trim27-207ENSMUST00000223065 Alpk3Q924C5 1678 aa28.27■■■□□ 2.12
Trim27-207ENSMUST00000223065 Atf7ipQ7TT18 1306 aa28.26■■■□□ 2.12
Trim27-207ENSMUST00000223065 PalldQ9ET54 1408 aa28.26■■■□□ 2.12
Trim27-207ENSMUST00000223065 Kank1E9Q238 1360 aa28.26■■■□□ 2.11
Trim27-207ENSMUST00000223065 Kif7B7ZNG0 1348 aa28.25■■■□□ 2.11
Trim27-207ENSMUST00000223065 Stag3O70576 1240 aa28.25■■■□□ 2.11
Trim27-207ENSMUST00000223065 Lrrc7Q80TE7 1490 aa28.24■■■□□ 2.11
Trim27-207ENSMUST00000223065 Gprasp1Q5U4C1 1347 aa28.22■■■□□ 2.11
Trim27-207ENSMUST00000223065 Myom1Q62234 1667 aaKnown RBP28.21■■■□□ 2.11
Trim27-207ENSMUST00000223065 Myt1Q8CFC2 1127 aa28.21■■■□□ 2.11
Trim27-207ENSMUST00000223065 Dcaf11Q91VU6 549 aa28.21■■■□□ 2.11
Trim27-207ENSMUST00000223065 Esx1O88933 382 aa28.21■■■□□ 2.11
Trim27-207ENSMUST00000223065 Rsph4aQ8BYM7 716 aa28.21■■■□□ 2.11
Trim27-207ENSMUST00000223065 Hfm1D3Z4R1 1434 aa28.21■■■□□ 2.11
Trim27-207ENSMUST00000223065 Qser1A2BIE1 1698 aa28.21■■■□□ 2.11
Trim27-207ENSMUST00000223065 IqubQ8CDK3 788 aa28.2■■■□□ 2.11
Trim27-207ENSMUST00000223065 Ift172Q6VH22 1749 aa28.19■■■□□ 2.1
Trim27-207ENSMUST00000223065 Ahdc1Q6PAL7 1594 aaKnown RBP28.19■■■□□ 2.1
Trim27-207ENSMUST00000223065 Wdr43Q6ZQL4 677 aaKnown RBP28.18■■■□□ 2.1
Trim27-207ENSMUST00000223065 MaddQ80U28 1577 aa28.18■■■□□ 2.1
Trim27-207ENSMUST00000223065 Erbb3Q61526 1339 aa28.18■■■□□ 2.1
Trim27-207ENSMUST00000223065 Upf2A2AT37 1269 aaKnown RBP28.18■■■□□ 2.1
Trim27-207ENSMUST00000223065 Nolc1E9Q5C9 702 aaKnown RBP28.18■■■□□ 2.1
Trim27-207ENSMUST00000223065 Prrc2bQ7TPM1 1486 aaKnown RBP28.17■■■□□ 2.1
Trim27-207ENSMUST00000223065 InsrP15208 1372 aa28.16■■■□□ 2.1
Trim27-207ENSMUST00000223065 Rad21Q61550 635 aaKnown RBP28.14■■■□□ 2.1
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms