RNA–Protein interactions for RNA: ENSMUST00000187727.1

Gm28578-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28578, Length 2,698 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28578-201ENSMUST00000187727 Knl1Q66JQ7 1612 aa16.78■□□□□ 0.28
Gm28578-201ENSMUST00000187727 Prdm2A2A7B5 1709 aaKnown RBP16.77■□□□□ 0.28
Gm28578-201ENSMUST00000187727 Ifit1bl1D3Z6F0 470 aa16.77■□□□□ 0.28
Gm28578-201ENSMUST00000187727 Pola1P33609 1465 aa16.77■□□□□ 0.27
Gm28578-201ENSMUST00000187727 Hfm1D3Z4R1 1434 aa16.76■□□□□ 0.27
Gm28578-201ENSMUST00000187727 Mroh1E0CZ22 1640 aa16.76■□□□□ 0.27
Gm28578-201ENSMUST00000187727 Arhgap23Q69ZH9 1483 aa16.75■□□□□ 0.27
Gm28578-201ENSMUST00000187727 Erich6D3Z6S9 713 aa16.73■□□□□ 0.27
Gm28578-201ENSMUST00000187727 Skint5A7XUY5 1461 aa16.72■□□□□ 0.27
Gm28578-201ENSMUST00000187727 Stra8P70278 393 aa16.71■□□□□ 0.27
Gm28578-201ENSMUST00000187727 Ahdc1Q6PAL7 1594 aaKnown RBP16.71■□□□□ 0.27
Gm28578-201ENSMUST00000187727 Gm13695A2AK44 830 aa16.71■□□□□ 0.26
Gm28578-201ENSMUST00000187727 DnmbpQ6TXD4 1580 aa16.7■□□□□ 0.26
Gm28578-201ENSMUST00000187727 Sbno1Q689Z5 1390 aa16.7■□□□□ 0.26
Gm28578-201ENSMUST00000187727 Sall3Q62255 1320 aa16.69■□□□□ 0.26
Gm28578-201ENSMUST00000187727 Nphp4P59240 1425 aa16.69■□□□□ 0.26
Gm28578-201ENSMUST00000187727 RictorQ6QI06 1708 aa16.69■□□□□ 0.26
Gm28578-201ENSMUST00000187727 Cfap65Q3V0B4 1847 aa16.69■□□□□ 0.26
Gm28578-201ENSMUST00000187727 Stk24Q99KH8 431 aa16.67■□□□□ 0.26
Gm28578-201ENSMUST00000187727 Slc52a2Q9D8F3 450 aa16.67■□□□□ 0.26
Gm28578-201ENSMUST00000187727 Myo3aQ8K3H5 1613 aa16.67■□□□□ 0.26
Gm28578-201ENSMUST00000187727 Kdm5aQ3UXZ9 1690 aa16.66■□□□□ 0.26
Gm28578-201ENSMUST00000187727 Itsn2Q9Z0R6 1659 aa16.66■□□□□ 0.26
Gm28578-201ENSMUST00000187727 Qser1A2BIE1 1698 aa16.65■□□□□ 0.26
Gm28578-201ENSMUST00000187727 CltcQ68FD5 1675 aaKnown RBP16.64■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Med14A2ABV5 1459 aaKnown RBP16.64■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Srcin1Q9QWI6 1250 aa16.63■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Cdk5rap2Q8K389 1822 aa16.63■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Srpk2O54781 681 aaKnown RBP16.63■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Tubgcp6G5E8P0 1769 aa16.63■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Myom1Q62234 1667 aaKnown RBP16.62■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Adamtsl3G3UXC7 1706 aa16.62■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Gm20521D3Z5F7 333 aa16.62■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Sipa1l1Q8C0T5 1782 aa16.62■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Afap1Q80YS6 731 aa16.6■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Prrc2bQ7TPM1 1486 aaKnown RBP16.59■□□□□ 0.25
Gm28578-201ENSMUST00000187727 Itsn1Q9Z0R4 1714 aa16.58■□□□□ 0.25
Gm28578-201ENSMUST00000187727 PalldQ9ET54 1408 aa16.58■□□□□ 0.24
Gm28578-201ENSMUST00000187727 PtprmP28828 1452 aa16.58■□□□□ 0.24
Gm28578-201ENSMUST00000187727 AU022751B1B0V2 589 aa16.58■□□□□ 0.24
Gm28578-201ENSMUST00000187727 MaddQ80U28 1577 aa16.57■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Naip7Q9JIB3 1402 aa16.57■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Gtf2e1Q9D0D5 440 aa16.57■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Gemin5Q8BX17 1502 aaKnown RBP16.57■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Kdm2aP59997 1161 aa16.56■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Lrrc7Q80TE7 1490 aa16.55■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Puf60Q3UEB3 564 aaKnown RBP16.55■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Anks4bQ8K3X6 423 aa16.55■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Ift172Q6VH22 1749 aa16.55■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Eif2ak4Q9QZ05 1648 aa16.54■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Usp40Q8BWR4 1235 aa16.54■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Os9Q8K2C7 672 aa16.53■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Zc3h13E9Q784 1729 aaKnown RBP16.52■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Dnajc5P60904 198 aa16.52■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Fan1Q69ZT1 1020 aa16.52■□□□□ 0.24
Gm28578-201ENSMUST00000187727 Gm16486A0A1D5RMD1 1434 aa16.52■□□□□ 0.23
Gm28578-201ENSMUST00000187727 Kif13aQ9EQW7 1749 aa16.52■□□□□ 0.23
Gm28578-201ENSMUST00000187727 Tmf1B9EKI3 1091 aa16.52■□□□□ 0.23
Gm28578-201ENSMUST00000187727 Plekhg1F6S200 1446 aa16.51■□□□□ 0.23
Gm28578-201ENSMUST00000187727 PrxO55103 1391 aa16.51■□□□□ 0.23
Gm28578-201ENSMUST00000187727 Lmtk3Q5XJV6 1424 aa16.5■□□□□ 0.23
Gm28578-201ENSMUST00000187727 InsrP15208 1372 aa16.49■□□□□ 0.23
Gm28578-201ENSMUST00000187727 PnisrA2AJT4 805 aaKnown RBP16.49■□□□□ 0.23
Gm28578-201ENSMUST00000187727 Arhgef28P97433 1693 aa16.49■□□□□ 0.23
Gm28578-201ENSMUST00000187727 Anp32bQ9EST5 272 aaKnown RBP16.49■□□□□ 0.23
Gm28578-201ENSMUST00000187727 IqubQ8CDK3 788 aa16.48■□□□□ 0.23
Gm28578-201ENSMUST00000187727 Dip2aQ8BWT5 1523 aa16.47■□□□□ 0.23
Gm28578-201ENSMUST00000187727 Bcl9Q9D219 1425 aa16.47■□□□□ 0.23
Gm28578-201ENSMUST00000187727 PplQ9R269 1755 aa16.46■□□□□ 0.23
Gm28578-201ENSMUST00000187727 Ercc6l2Q9JIM3 1537 aa16.46■□□□□ 0.23
Gm28578-201ENSMUST00000187727 Chd2E9PZM4 1827 aaKnown RBP16.45■□□□□ 0.22
Gm28578-201ENSMUST00000187727 Fam184bQ0KK56 942 aa16.44■□□□□ 0.22
Gm28578-201ENSMUST00000187727 CenpjQ569L8 1344 aa16.44■□□□□ 0.22
Gm28578-201ENSMUST00000187727 Zscan10Q3URR7 782 aa16.44■□□□□ 0.22
Gm28578-201ENSMUST00000187727 Pank3Q8R2W9 370 aa16.44■□□□□ 0.22
Gm28578-201ENSMUST00000187727 Exoc6Q8R313 802 aa16.43■□□□□ 0.22
Gm28578-201ENSMUST00000187727 Dip2bQ3UH60 1574 aa16.43■□□□□ 0.22
Gm28578-201ENSMUST00000187727 Mrs2Q5NCE8 434 aa16.42■□□□□ 0.22
Gm28578-201ENSMUST00000187727 Gprasp1Q5U4C1 1347 aa16.42■□□□□ 0.22
Gm28578-201ENSMUST00000187727 KdrP35918 1367 aa16.41■□□□□ 0.22
Gm28578-201ENSMUST00000187727 Tnnt3Q9QZ47 272 aa16.41■□□□□ 0.22
Gm28578-201ENSMUST00000187727 NrdcQ8BHG1 1161 aa16.4■□□□□ 0.22
Gm28578-201ENSMUST00000187727 Stag3O70576 1240 aa16.39■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Tex14Q7M6U3 1450 aa16.39■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Dnajc5gQ8C632 165 aa16.39■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Slit3Q9WVB4 1523 aa16.38■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Slc4a1apE9PX68 744 aa16.38■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Shq1Q7TMX5 569 aa16.38■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Wwc2Q6NXJ0 1187 aa16.37■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Slc4a2P13808 1237 aaKnown RBP16.37■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Inpp5dQ9ES52 1191 aa16.37■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Pik3r4Q8VD65 1358 aa16.37■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Safb2Q80YR5 991 aaKnown RBP16.36■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Arap3Q8R5G7 1538 aa16.35■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Znf710Q3U288 666 aa16.35■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Slc24a1Q91WD8 1130 aa16.35■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Atf7ipQ7TT18 1306 aa16.33■□□□□ 0.21
Gm28578-201ENSMUST00000187727 Rab3gap2Q8BMG7 1366 aa16.33■□□□□ 0.2
Gm28578-201ENSMUST00000187727 Zbtb4Q5F293 982 aa16.32■□□□□ 0.2
Gm28578-201ENSMUST00000187727 Cps1Q8C196 1500 aa16.31■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 458 ms