RNA–Protein interactions for RNA: ENSMUST00000187280.1

Gm28054-201, mousemouse

TSL 3 BASIC

Gene Gm28054, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28054-201ENSMUST00000187280 MsmpB1AWI6 139 aa12.77□□□□□ -0.37
Gm28054-201ENSMUST00000187280 Hoxb4P10284 250 aa12.76□□□□□ -0.37
Gm28054-201ENSMUST00000187280 Tmem52Q9D702 196 aa12.74□□□□□ -0.37
Gm28054-201ENSMUST00000187280 Pax4P32115 349 aa12.72□□□□□ -0.37
Gm28054-201ENSMUST00000187280 Atf4Q06507 349 aa12.7□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Themis2Q91YX0 663 aa12.7□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Speer3W4VSP1 261 aa12.7□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Gm4788E9Q8B5 879 aa12.69□□□□□ -0.38
Gm28054-201ENSMUST00000187280 MarsQ68FL6 902 aaKnown RBP12.69□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Suz12Q80U70 741 aaKnown RBP12.69□□□□□ -0.38
Gm28054-201ENSMUST00000187280 FcrlaQ920A9 352 aa12.69□□□□□ -0.38
Gm28054-201ENSMUST00000187280 PtpreP49446 699 aa12.68□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Dbn1Q9QXS6 706 aa12.68□□□□□ -0.38
Gm28054-201ENSMUST00000187280 ColqO35348 457 aa12.67□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Pola2P33611 600 aa12.67□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Tpcn1Q9EQJ0 817 aa12.67□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Spaca7Q9D2S4 182 aa12.66□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Thsd4Q3UTY6 1018 aa12.65□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Zfp943Q6NZP4 507 aa12.65□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Znf330Q922H9 316 aa12.65□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Grxcr1Q50H32 290 aa12.64□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Traf7Q922B6 594 aa12.62□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Cdca7lQ922M5 438 aa12.61□□□□□ -0.39
Gm28054-201ENSMUST00000187280 UvssaQ9D479 717 aa12.61□□□□□ -0.39
Gm28054-201ENSMUST00000187280 SowahcQ8C0J6 512 aa12.6□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Mei1Q9D4I2 1268 aa12.6□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Nckap5lQ6GQX2 1323 aa12.6□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Zpr1Q62384 459 aa12.59□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Plcg2Q8CIH5 1265 aa12.59□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Usp26Q99MX1 835 aa12.58□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Trbv21A0A0A6YX06 97 aa12.57□□□□□ -0.4
Gm28054-201ENSMUST00000187280 AW822073A0A0N4SUK1 652 aa12.57□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Usp46P62069 366 aa12.57□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Cdv3Q4VAA2 281 aaKnown RBP12.57□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Ppfia1B2RXQ2 1266 aa12.56□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Dsg2O55111 1122 aa12.56□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Pla2g2cP48076 150 aa12.56□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Ube3bQ9ES34 1070 aa12.56□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Stk11ipQ3TAA7 1072 aa12.54□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Cyp7a1Q64505 503 aa12.54□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Adamts19P59509 1210 aa12.52□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Spryd7Q3TFQ1 196 aa12.52□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Scaf1Q5U4C3 1256 aaKnown RBP12.52□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Vsig10D3YX43 558 aa12.51□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Hhipl2Q9D2G9 717 aa12.51□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Thap11Q9JJD0 305 aa12.51□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Pcdhb16Q91Y03 802 aa12.5□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Dnajc14Q921R4 703 aa12.5□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Adam19O35674 920 aa12.49□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Foxj1Q61660 421 aa12.49□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Dsc3P55850 896 aa12.48□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Mtfr1Q99MB2 328 aa12.47□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Pnma5Q5DTT8 618 aa12.46□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Setdb1O88974 1307 aa12.45□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Man1a2P39098 641 aa12.45□□□□□ -0.42
Gm28054-201ENSMUST00000187280 NppbP40753 121 aa12.45□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Usp3Q91W36 520 aaKnown RBP12.45□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Catsper2A2ARP9 588 aa12.44□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Recql4Q75NR7 1216 aaKnown RBP12.44□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Rtn1Q8K0T0 780 aa12.44□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Spink5Q148R4 1017 aa12.42□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Slc30a10Q3UVU3 470 aa12.42□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Igflr1Q3U4N7 345 aa12.41□□□□□ -0.42
Gm28054-201ENSMUST00000187280 F11Q91Y47 624 aa12.41□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Prr18Q6PAN7 307 aa12.38□□□□□ -0.43
Gm28054-201ENSMUST00000187280 Fcf1Q9CTH6 198 aa12.36□□□□□ -0.43
Gm28054-201ENSMUST00000187280 Chtf18Q8BIW9 969 aa12.35□□□□□ -0.43
Gm28054-201ENSMUST00000187280 IrgqQ8VIM9 583 aa12.35□□□□□ -0.43
Gm28054-201ENSMUST00000187280 Ms4a4bQ9ES61 226 aa12.34□□□□□ -0.43
Gm28054-201ENSMUST00000187280 Ankrd33bQ3U0L2 486 aa12.33□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Eml3Q8VC03 897 aa12.33□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Mmp16Q9WTR0 607 aa12.33□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Pcdhb3Q91XZ7 784 aa12.32□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Nek1P51954 1203 aa12.3□□□□□ -0.44
Gm28054-201ENSMUST00000187280 4930504O13RikQ8C5Z9 145 aa12.3□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Pcdhb22Q91XZ8 794 aa12.3□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Slc10a4Q3UEZ8 437 aa12.29□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Nsfl1cQ9CZ44 370 aaKnown RBP12.29□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Gm17324Q8C6J8 137 aa12.27□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Armc3A2AU72 881 aa12.26□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Ccdc102aQ3TMW1 549 aa12.23□□□□□ -0.45
Gm28054-201ENSMUST00000187280 ClmQ7TSN2 230 aa12.23□□□□□ -0.45
Gm28054-201ENSMUST00000187280 FanccP50652 591 aa12.22□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Fut2Q9JL27 347 aa12.22□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Limd1Q9QXD8 668 aa12.22□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Hoxb3P09026 433 aa12.21□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Abcf1Q6P542 837 aaKnown RBP12.21□□□□□ -0.45
Gm28054-201ENSMUST00000187280 5730596B20RikQ8BQ08 205 aa12.21□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Ccdc96Q9CR92 584 aa12.21□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Pacs2Q3V3Q7 862 aa12.2□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Gtf2ird1Q9JI57 1104 aaKnown RBP12.2□□□□□ -0.46
Gm28054-201ENSMUST00000187280 TbcelQ8C5W3 424 aa12.19□□□□□ -0.46
Gm28054-201ENSMUST00000187280 LrgukQ9D5S7 820 aa12.19□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Nubp1Q9R060 320 aa12.19□□□□□ -0.46
Gm28054-201ENSMUST00000187280 A0A1L1SQF0 893 aa12.18□□□□□ -0.46
Gm28054-201ENSMUST00000187280 PtprnQ60673 979 aa12.18□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Adam26aQ9R158 697 aa12.18□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Atp6v1aP50516 617 aaKnown RBP12.17□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Trak1Q6PD31 939 aa12.17□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Dixdc1Q80Y83 711 aa12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms