RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 PzpQ61838 1495 aa18.01■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Arid4bA2CG63 1314 aaKnown RBP18■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Rapgef3Q8VCC8 918 aa18■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Prrc2bQ7TPM1 1486 aaKnown RBP18■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Med1Q925J9 1575 aa18■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 PalldQ9ET54 1408 aa17.99■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Pkd2O35245 966 aa17.99■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Txndc2Q6P902 515 aa17.99■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Stk24Q99KH8 431 aa17.99■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Dhx9O70133 1380 aaKnown RBP17.98■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 AatkQ80YE4 1365 aa17.98■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Dot1lQ6XZL8 1540 aa17.97■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Ankrd36D3Z4K0 1415 aa17.97■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Setd1aE9PYH6 1716 aa17.96■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Mier1Q5UAK0 511 aa17.96■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Myo3aQ8K3H5 1613 aa17.96■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Gli3Q61602 1583 aa17.96■□□□□ 0.46
Ccdc28a-203ENSMUST00000173243 Tubgcp6G5E8P0 1769 aa17.94■□□□□ 0.46
Ccdc28a-203ENSMUST00000173243 Sall3Q62255 1320 aa17.93■□□□□ 0.46
Ccdc28a-203ENSMUST00000173243 Rock1P70335 1354 aa17.92■□□□□ 0.46
Ccdc28a-203ENSMUST00000173243 Plxnc1Q9QZC2 1574 aa17.92■□□□□ 0.46
Ccdc28a-203ENSMUST00000173243 Psme1P97371 249 aa17.92■□□□□ 0.46
Ccdc28a-203ENSMUST00000173243 Arhgef28P97433 1693 aa17.92■□□□□ 0.46
Ccdc28a-203ENSMUST00000173243 Slit3Q9WVB4 1523 aa17.9■□□□□ 0.46
Ccdc28a-203ENSMUST00000173243 Myom1Q62234 1667 aaKnown RBP17.89■□□□□ 0.45
Ccdc28a-203ENSMUST00000173243 Iqsec2Q5DU25 1478 aa17.88■□□□□ 0.45
Ccdc28a-203ENSMUST00000173243 Thsd7aQ69ZU6 1645 aa17.87■□□□□ 0.45
Ccdc28a-203ENSMUST00000173243 Gm13695A2AK44 830 aa17.87■□□□□ 0.45
Ccdc28a-203ENSMUST00000173243 Fbxo41Q6NS60 873 aa17.86■□□□□ 0.45
Ccdc28a-203ENSMUST00000173243 P3h3Q8CG70 732 aa17.86■□□□□ 0.45
Ccdc28a-203ENSMUST00000173243 Mroh3A0A1D5RM54 893 aa17.84■□□□□ 0.45
Ccdc28a-203ENSMUST00000173243 AU022751B1B0V2 589 aa17.84■□□□□ 0.45
Ccdc28a-203ENSMUST00000173243 Rims1Q99NE5 1463 aa17.83■□□□□ 0.45
Ccdc28a-203ENSMUST00000173243 Pik3r4Q8VD65 1358 aa17.83■□□□□ 0.45
Ccdc28a-203ENSMUST00000173243 Washc2Q6PGL7 1334 aa17.83■□□□□ 0.44
Ccdc28a-203ENSMUST00000173243 IghaA0A0A6YXW6 389 aa17.83■□□□□ 0.44
Ccdc28a-203ENSMUST00000173243 Arap3Q8R5G7 1538 aa17.82■□□□□ 0.44
Ccdc28a-203ENSMUST00000173243 MaddQ80U28 1577 aa17.8■□□□□ 0.44
Ccdc28a-203ENSMUST00000173243 Tulp4Q9JIL5 1547 aa17.8■□□□□ 0.44
Ccdc28a-203ENSMUST00000173243 Usp47Q8BY87 1376 aa17.79■□□□□ 0.44
Ccdc28a-203ENSMUST00000173243 Col18a1P39061 1774 aa17.77■□□□□ 0.44
Ccdc28a-203ENSMUST00000173243 Adamts13Q769J6 1426 aa17.77■□□□□ 0.44
Ccdc28a-203ENSMUST00000173243 Slc52a2Q9D8F3 450 aa17.76■□□□□ 0.43
Ccdc28a-203ENSMUST00000173243 Cep152A2AUM9 1736 aaKnown RBP17.75■□□□□ 0.43
Ccdc28a-203ENSMUST00000173243 Asxl2Q8BZ32 1370 aa17.74■□□□□ 0.43
Ccdc28a-203ENSMUST00000173243 Unc13bQ9Z1N9 1602 aa17.73■□□□□ 0.43
Ccdc28a-203ENSMUST00000173243 Shq1Q7TMX5 569 aa17.73■□□□□ 0.43
Ccdc28a-203ENSMUST00000173243 Q9D9H8 365 aa17.73■□□□□ 0.43
Ccdc28a-203ENSMUST00000173243 Tns3Q5SSZ5 1440 aa17.72■□□□□ 0.43
Ccdc28a-203ENSMUST00000173243 Eid3Q3V124 375 aa17.72■□□□□ 0.43
Ccdc28a-203ENSMUST00000173243 Atp1b4Q99ME6 356 aa17.72■□□□□ 0.43
Ccdc28a-203ENSMUST00000173243 Mbd5B1AYB6 1498 aa17.71■□□□□ 0.43
Ccdc28a-203ENSMUST00000173243 Cdk13Q69ZA1 1511 aaKnown RBP17.71■□□□□ 0.43
Ccdc28a-203ENSMUST00000173243 Cps1Q8C196 1500 aa17.69■□□□□ 0.42
Ccdc28a-203ENSMUST00000173243 Hspa1lP16627 641 aa17.68■□□□□ 0.42
Ccdc28a-203ENSMUST00000173243 Rgl3Q3UYI5 709 aa17.68■□□□□ 0.42
Ccdc28a-203ENSMUST00000173243 Cdk5rap2Q8K389 1822 aa17.66■□□□□ 0.42
Ccdc28a-203ENSMUST00000173243 Hspa5P20029 655 aaKnown RBP17.66■□□□□ 0.42
Ccdc28a-203ENSMUST00000173243 Ifit1bl1D3Z6F0 470 aa17.65■□□□□ 0.42
Ccdc28a-203ENSMUST00000173243 Ift172Q6VH22 1749 aa17.64■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 DnmbpQ6TXD4 1580 aa17.64■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Srpk2O54781 681 aaKnown RBP17.63■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Amigo3Q8C2S7 508 aa17.63■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Nwd1A6H603 1563 aa17.62■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Col14a1Q80X19 1797 aa17.62■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Slain2Q8CI08 581 aa17.61■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Polr3aB2RXC6 1390 aa17.61■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Plekhg1F6S200 1446 aa17.61■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Sipa1l1Q8C0T5 1782 aa17.61■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 HnrnpmQ9D0E1 729 aaKnown RBP17.6■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Cpsf1Q9EPU4 1441 aaKnown RBP17.6■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Brinp3Q499E0 766 aa17.59■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Kif20bQ80WE4 1774 aaKnown RBP17.58■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Lrrc7Q80TE7 1490 aa17.58■□□□□ 0.41
Ccdc28a-203ENSMUST00000173243 Kdm2aP59997 1161 aa17.58■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Puf60Q3UEB3 564 aaKnown RBP17.58■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Fan1Q69ZT1 1020 aa17.58■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Gm20521D3Z5F7 333 aa17.57■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Utp14aQ640M1 767 aaKnown RBP17.56■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Bcl11bQ99PV8 884 aa17.56■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Dapk1Q80YE7 1442 aa17.55■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 NalcnQ8BXR5 1738 aa17.55■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Itsn2Q9Z0R6 1659 aa17.55■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Tmem94Q7TSH8 1360 aa17.54■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Grwd1Q810D6 446 aaKnown RBP17.54■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Os9Q8K2C7 672 aa17.54■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Rreb1Q3UH06 1700 aaKnown RBP17.53■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 D430041D05RikF6ZGR6 1678 aa17.53■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Evi5lH3BKQ3 813 aa17.53■□□□□ 0.4
Ccdc28a-203ENSMUST00000173243 Pik3c2aQ61194 1686 aa17.52■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 Usp32F8VPZ3 1604 aa17.51■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 Cep170bQ80U49 1574 aa17.51■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 Stk26Q99JT2 416 aa17.5■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 C3P01027 1663 aa17.5■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 Tom1O88746 492 aa17.49■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 Atf3Q60765 181 aa17.49■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 Stard8Q8K031 1019 aa17.49■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 Mug2P28666 1451 aa17.49■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 Nphp4P59240 1425 aa17.48■□□□□ 0.39
Ccdc28a-203ENSMUST00000173243 Q3UJC8 639 aa17.48■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms