RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Ksr2Q3UVC0 959 aa7.41□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Kcnj4P52189 445 aa7.41□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Zfp91Q62511 572 aa7.41□□□□□ -1.22
Ubr4-212ENSMUST00000165860 1700019A02RikA0A087WPV9 146 aa7.41□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Cep162Q6ZQ06 1403 aa7.4□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Rsph4aQ8BYM7 716 aa7.4□□□□□ -1.22
Ubr4-212ENSMUST00000165860 Rb1cc1Q9ESK9 1588 aa7.4□□□□□ -1.22
Ubr4-212ENSMUST00000165860 U2surpQ6NV83 1029 aaKnown RBP7.4□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Ccdc146E9Q9F7 977 aa7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Sptbn5F6UCX4 1208 aa7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Mis12Q9CY25 206 aa7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Esx1O88933 382 aa7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 SarnpQ9D1J3 210 aaKnown RBP7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Gm20521D3Z5F7 333 aa7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Filip1lQ6P6L0 1131 aa7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Dync1i1O88485 628 aa7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Hmgn5Q9JL35 406 aa7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Kiaa0753Q6A000 959 aa7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Iffo2Q8R2V2 512 aa7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Sept14Q9DA97 430 aa7.39□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Znhit6Q3UFB2 460 aaKnown RBP7.38□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Rrp7aQ9D1C9 280 aaKnown RBP7.38□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Fam184aE9PW83 1143 aa7.38□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Anapc15-psA0A140T8L6 141 aa7.38□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Calcoco1Q8CGU1 691 aa7.38□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Zfp444Q3TDV8 331 aaKnown RBP7.38□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Drc7Q6V3W6 876 aa7.38□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Cers3Q1A3B0 383 aa7.38□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Wdr78E9PYY5 807 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Pank1Q8K4K6 548 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Chrna2Q91X60 512 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Trim58Q5NCC9 485 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Rpgrip1lQ8CG73 1264 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Atl3Q91YH5 541 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Letm1Q9Z2I0 738 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Fyco1Q8VDC1 1437 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Mns1Q61884 491 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Egfem1Q8C088 590 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Ppp2r3aB2RXC8 1150 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Map9Q3TRR0 646 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 NgefQ8CHT1 710 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Rpap1Q80TE0 1409 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Dctn1O08788 1281 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Kif3cO35066 796 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Pmfbp1Q9WVQ0 1022 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Jakmip3Q5DTN8 844 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Anapc15P60007 132 aa7.37□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Ppp1r1bQ60829 194 aa7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Dcaf11Q91VU6 549 aa7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Fam114a1Q9D281 569 aa7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Dnai2A2AC93 623 aa7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Tshz1Q5DTH5 1084 aa7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 U2af1Q9D883 239 aaKnown RBP7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Sh3bgrQ9WUZ7 214 aa7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Erich4Q3UNU4 136 aa7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Olfml1Q8BSH2 233 aa7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Gtf3c6Q9D8P7 227 aa7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 1700017N19RikA0A087WPJ1 469 aa7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 CastP51125 788 aa7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Srpk2O54781 681 aaKnown RBP7.36□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Cgnl1Q6AW69 1298 aa7.35□□□□□ -1.23
Ubr4-212ENSMUST00000165860 L3mbtl2P59178 703 aa7.35□□□□□ -1.23
Ubr4-212ENSMUST00000165860 NaspQ99MD9 773 aaKnown RBP7.35□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Exosc9Q9JHI7 438 aaKnown RBP7.35□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Ccdc39Q9D5Y1 937 aa7.35□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Tubb4aQ9D6F9 444 aa7.35□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Tpm3-rs7D3Z2H9 248 aa7.35□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Mcm5P49718 733 aa7.35□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Pank3Q8R2W9 370 aa7.35□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Cep120Q7TSG1 988 aa7.35□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Tpm4Q6IRU2 248 aa7.34□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Nap1l3Q794H2 544 aa7.34□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Frmd3Q8BHD4 595 aa7.34□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Rnf20Q5DTM8 973 aa7.34□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Rassf4Q8CB96 322 aa7.34□□□□□ -1.23
Ubr4-212ENSMUST00000165860 LarsQ8BMJ2 1178 aa7.34□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Tmc1Q8R4P5 757 aa7.34□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Ppfibp2O35711 882 aa7.34□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Eif4g2Q62448 906 aaKnown RBP7.34□□□□□ -1.23
Ubr4-212ENSMUST00000165860 MycbpQ9EQS3 103 aa7.34□□□□□ -1.23
Ubr4-212ENSMUST00000165860 Spag5Q7TME2 1165 aa7.34□□□□□ -1.24
Ubr4-212ENSMUST00000165860 MyclP10166 368 aa7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Rock1P70335 1354 aa7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ppp1r9bQ6R891 817 aaKnown RBP7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Ccdc96Q9CR92 584 aa7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Trak1Q6PD31 939 aa7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Elp1Q7TT37 1333 aaKnown RBP7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Zfp651E9PZ11 729 aa7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Nol12Q8BG17 217 aa7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Rassf8Q8CJ96 419 aa7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Nop14Q8R3N1 860 aaKnown RBP7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Cc2d1bQ8BRN9 848 aa7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 IqubQ8CDK3 788 aa7.33□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Fmnl3Q6ZPF4 1028 aa7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Bag4Q8CI61 457 aa7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Phactr2B1AVP0 632 aa7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Zkscan1Q8BGS3 561 aaKnown RBP7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Chmp4cQ9D7F7 232 aa7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Otud6bQ8K2H2 294 aa7.32□□□□□ -1.24
Ubr4-212ENSMUST00000165860 Cpsf2O35218 782 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms