RNA–Protein interactions for RNA: ENSMUST00000161455.7

Ctc1-211, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Ctc1, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-211ENSMUST00000161455 Asxl1P59598 1514 aa13.89□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Stag3O70576 1240 aa13.89□□□□□ -0.19
Ctc1-211ENSMUST00000161455 IqubQ8CDK3 788 aa13.89□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Alpk3Q924C5 1678 aa13.88□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Utp14aQ640M1 767 aaKnown RBP13.88□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Card11Q8CIS0 1159 aa13.88□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Uggt2E9Q4X2 1504 aa13.87□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Rundc1Q0VDN7 615 aa13.87□□□□□ -0.19
Ctc1-211ENSMUST00000161455 PtprmP28828 1452 aa13.87□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Abca17E9PX95 1733 aa13.86□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Prex1Q69ZK0 1650 aa13.86□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Myo5cE9Q1F5 1742 aa13.86□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Skint5A7XUY5 1461 aa13.85□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Zfp777B9EKF4 885 aa13.85□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Myom2Q14BI5 1463 aa13.85□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Asxl2Q8BZ32 1370 aa13.85□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Topbp1Q6ZQF0 1515 aa13.84□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Nolc1E9Q5C9 702 aaKnown RBP13.84□□□□□ -0.19
Ctc1-211ENSMUST00000161455 Edc4Q3UJB9 1406 aaKnown RBP13.83□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Upf2A2AT37 1269 aaKnown RBP13.83□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Robo2Q7TPD3 1470 aa13.83□□□□□ -0.2
Ctc1-211ENSMUST00000161455 4930407I10RikD3Z5T8 1512 aa13.83□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Ercc6l2Q9JIM3 1537 aa13.83□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Rprd2Q6NXI6 1469 aaKnown RBP13.82□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Prrc2bQ7TPM1 1486 aaKnown RBP13.82□□□□□ -0.2
Ctc1-211ENSMUST00000161455 NgefQ8CHT1 710 aa13.82□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Puf60Q3UEB3 564 aaKnown RBP13.81□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Knl1Q66JQ7 1612 aa13.81□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Adamtsl3G3UXC7 1706 aa13.81□□□□□ -0.2
Ctc1-211ENSMUST00000161455 AnkarA2RT91 1465 aa13.8□□□□□ -0.2
Ctc1-211ENSMUST00000161455 AatkQ80YE4 1365 aa13.8□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Pik3c2gO70167 1506 aa13.8□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Efcab6Q6P1E8 1516 aa13.8□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Gtf2e1Q9D0D5 440 aa13.8□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Usp40Q8BWR4 1235 aa13.79□□□□□ -0.2
Ctc1-211ENSMUST00000161455 HnrnpmQ9D0E1 729 aaKnown RBP13.79□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Tarbp1E9Q368 1579 aa13.79□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Abcc6Q9R1S7 1498 aa13.79□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Sin3aQ60520 1274 aaKnown RBP13.78□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Adgrb3Q80ZF8 1522 aa13.78□□□□□ -0.2
Ctc1-211ENSMUST00000161455 CatipB9EKE5 520 aa13.78□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Gtf3c5Q8R2T8 520 aa13.78□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Bcl11bQ99PV8 884 aa13.78□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Srcin1Q9QWI6 1250 aa13.78□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Tnnt3Q9QZ47 272 aa13.78□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Trpm1Q2TV84 1622 aa13.77□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Ahdc1Q6PAL7 1594 aaKnown RBP13.77□□□□□ -0.2
Ctc1-211ENSMUST00000161455 Znf316Q6PGE4 1016 aa13.77□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Mink1Q9JM52 1308 aa13.76□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Akap12Q9WTQ5 1684 aa13.76□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Cnga1P29974 684 aa13.76□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Irx3P81067 507 aa13.76□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Sox12Q04890 314 aa13.76□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Ipo4Q8VI75 1082 aa13.76□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Lamc1P02468 1607 aaKnown RBP13.75□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Evi5lH3BKQ3 813 aa13.75□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Rock1P70335 1354 aa13.75□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Dapk1Q80YE7 1442 aa13.74□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Exosc9Q9JHI7 438 aaKnown RBP13.74□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Naip7Q9JIB3 1402 aa13.74□□□□□ -0.21
Ctc1-211ENSMUST00000161455 AU022751B1B0V2 589 aa13.73□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Ecm2Q5FW85 670 aa13.73□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Kcnn1Q9EQR3 537 aa13.72□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Rapgef3Q8VCC8 918 aa13.71□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Supt16hQ920B9 1047 aa13.71□□□□□ -0.21
Ctc1-211ENSMUST00000161455 Rock2P70336 1388 aa13.71□□□□□ -0.22
Ctc1-211ENSMUST00000161455 Dot1lQ6XZL8 1540 aa13.7□□□□□ -0.22
Ctc1-211ENSMUST00000161455 Slc52a2Q9D8F3 450 aa13.7□□□□□ -0.22
Ctc1-211ENSMUST00000161455 Atp2b2Q9R0K7 1198 aa13.7□□□□□ -0.22
Ctc1-211ENSMUST00000161455 Iqgap3F8VQ29 1632 aa13.69□□□□□ -0.22
Ctc1-211ENSMUST00000161455 Adamts7Q68SA9 1657 aa13.69□□□□□ -0.22
Ctc1-211ENSMUST00000161455 RictorQ6QI06 1708 aa13.69□□□□□ -0.22
Ctc1-211ENSMUST00000161455 Brwd3A2AHJ4 1799 aa13.67□□□□□ -0.22
Ctc1-211ENSMUST00000161455 Arhgap23Q69ZH9 1483 aa13.66□□□□□ -0.22
Ctc1-211ENSMUST00000161455 Ppip5k1A2ARP1 1436 aa13.66□□□□□ -0.22
Ctc1-211ENSMUST00000161455 Med14A2ABV5 1459 aaKnown RBP13.65□□□□□ -0.22
Ctc1-211ENSMUST00000161455 Tmem94Q7TSH8 1360 aa13.65□□□□□ -0.22
Ctc1-211ENSMUST00000161455 Cwc22Q8C5N3 908 aaKnown RBP13.64□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Polr3aB2RXC6 1390 aa13.64□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Scaf1Q5U4C3 1256 aaKnown RBP13.64□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Atf3Q60765 181 aa13.64□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Scaf11E9PZM7 1456 aaKnown RBP13.63□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Stard8Q8K031 1019 aa13.63□□□□□ -0.23
Ctc1-211ENSMUST00000161455 CenpjQ569L8 1344 aa13.63□□□□□ -0.23
Ctc1-211ENSMUST00000161455 BccipQ9CWI3 316 aa13.63□□□□□ -0.23
Ctc1-211ENSMUST00000161455 AampJ3QN89 436 aa13.62□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Q3UJC8 639 aa13.61□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Dip2bQ3UH60 1574 aa13.61□□□□□ -0.23
Ctc1-211ENSMUST00000161455 PzpQ61838 1495 aa13.61□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Cdk13Q69ZA1 1511 aaKnown RBP13.61□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Kif21bQ9QXL1 1668 aa13.61□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Tulp4Q9JIL5 1547 aa13.6□□□□□ -0.23
Ctc1-211ENSMUST00000161455 IghaA0A0A6YXW6 389 aa13.6□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Gm10563F6WIE4 79 aa13.6□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Topaz1E5FYH1 1653 aa13.6□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Tecpr2Q3UH45 1423 aa13.59□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Tmem131lQ3U3D7 1597 aa13.59□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Ino80Q6ZPV2 1559 aa13.59□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Ccdc27Q3V036 639 aa13.59□□□□□ -0.23
Ctc1-211ENSMUST00000161455 Ap3b2Q9JME5 1082 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms