RNA–Protein interactions for RNA: ENSMUST00000147044.3

Trim3-205, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-205ENSMUST00000147044 Cpsf1Q9EPU4 1441 aaKnown RBP20.22■□□□□ 0.83
Trim3-205ENSMUST00000147044 Plekhg5Q66T02 1073 aa20.22■□□□□ 0.83
Trim3-205ENSMUST00000147044 Znf518aB2RRF6 1478 aaKnown RBP20.2■□□□□ 0.83
Trim3-205ENSMUST00000147044 PrxO55103 1391 aa20.19■□□□□ 0.82
Trim3-205ENSMUST00000147044 AatkQ80YE4 1365 aa20.19■□□□□ 0.82
Trim3-205ENSMUST00000147044 Iqgap1Q9JKF1 1657 aaKnown RBP20.18■□□□□ 0.82
Trim3-205ENSMUST00000147044 Myo5cE9Q1F5 1742 aa20.17■□□□□ 0.82
Trim3-205ENSMUST00000147044 PnisrA2AJT4 805 aaKnown RBP20.17■□□□□ 0.82
Trim3-205ENSMUST00000147044 Gtf2e1Q9D0D5 440 aa20.16■□□□□ 0.82
Trim3-205ENSMUST00000147044 Dip2cE9PWR4 1557 aa20.16■□□□□ 0.82
Trim3-205ENSMUST00000147044 AU022751B1B0V2 589 aa20.16■□□□□ 0.82
Trim3-205ENSMUST00000147044 Puf60Q3UEB3 564 aaKnown RBP20.16■□□□□ 0.82
Trim3-205ENSMUST00000147044 Stag3O70576 1240 aa20.15■□□□□ 0.82
Trim3-205ENSMUST00000147044 DroshaQ5HZJ0 1373 aaKnown RBP20.15■□□□□ 0.82
Trim3-205ENSMUST00000147044 Abca17E9PX95 1733 aa20.14■□□□□ 0.82
Trim3-205ENSMUST00000147044 Neurl4Q5NCX5 1563 aa20.13■□□□□ 0.81
Trim3-205ENSMUST00000147044 Prex1Q69ZK0 1650 aa20.12■□□□□ 0.81
Trim3-205ENSMUST00000147044 Calr4Q3TQS0 420 aa20.11■□□□□ 0.81
Trim3-205ENSMUST00000147044 Ofd1Q80Z25 1017 aa20.11■□□□□ 0.81
Trim3-205ENSMUST00000147044 Asxl2Q8BZ32 1370 aa20.11■□□□□ 0.81
Trim3-205ENSMUST00000147044 Zscan10Q3URR7 782 aa20.1■□□□□ 0.81
Trim3-205ENSMUST00000147044 AnkarA2RT91 1465 aa20.1■□□□□ 0.81
Trim3-205ENSMUST00000147044 Fndc1E9Q043 1732 aa20.1■□□□□ 0.81
Trim3-205ENSMUST00000147044 Q9D9H8 365 aa20.1■□□□□ 0.81
Trim3-205ENSMUST00000147044 Shq1Q7TMX5 569 aa20.09■□□□□ 0.81
Trim3-205ENSMUST00000147044 Dcaf11Q91VU6 549 aa20.09■□□□□ 0.81
Trim3-205ENSMUST00000147044 Myo3aQ8K3H5 1613 aa20.07■□□□□ 0.8
Trim3-205ENSMUST00000147044 Tmf1B9EKI3 1091 aa20.05■□□□□ 0.8
Trim3-205ENSMUST00000147044 Anp32aO35381 247 aa20.05■□□□□ 0.8
Trim3-205ENSMUST00000147044 Esx1O88933 382 aa20.05■□□□□ 0.8
Trim3-205ENSMUST00000147044 Clasp1Q80TV8 1535 aaKnown RBP20.05■□□□□ 0.8
Trim3-205ENSMUST00000147044 RereQ80TZ9 1558 aa20.04■□□□□ 0.8
Trim3-205ENSMUST00000147044 Ppip5k1A2ARP1 1436 aa20.04■□□□□ 0.8
Trim3-205ENSMUST00000147044 Mink1Q9JM52 1308 aa20.04■□□□□ 0.8
Trim3-205ENSMUST00000147044 Kdm5cP41230 1554 aa20.04■□□□□ 0.8
Trim3-205ENSMUST00000147044 Fam184bQ0KK56 942 aa20.04■□□□□ 0.8
Trim3-205ENSMUST00000147044 Znf316Q6PGE4 1016 aa20.03■□□□□ 0.8
Trim3-205ENSMUST00000147044 Atp10aO54827 1508 aa20.01■□□□□ 0.79
Trim3-205ENSMUST00000147044 Iqgap3F8VQ29 1632 aa20.01■□□□□ 0.79
Trim3-205ENSMUST00000147044 Kcnh8P59111 1102 aa19.99■□□□□ 0.79
Trim3-205ENSMUST00000147044 CrbnQ8C7D2 445 aa19.99■□□□□ 0.79
Trim3-205ENSMUST00000147044 Hdac5Q9Z2V6 1113 aa19.98■□□□□ 0.79
Trim3-205ENSMUST00000147044 Safb2Q80YR5 991 aaKnown RBP19.98■□□□□ 0.79
Trim3-205ENSMUST00000147044 AdgbG3UZ78 1657 aa19.98■□□□□ 0.79
Trim3-205ENSMUST00000147044 Cul9Q80TT8 1865 aa19.98■□□□□ 0.79
Trim3-205ENSMUST00000147044 Kif7B7ZNG0 1348 aa19.98■□□□□ 0.79
Trim3-205ENSMUST00000147044 Anp32bQ9EST5 272 aaKnown RBP19.97■□□□□ 0.79
Trim3-205ENSMUST00000147044 Tcerg1Q8CGF7 1100 aaKnown RBP19.97■□□□□ 0.79
Trim3-205ENSMUST00000147044 Zscan21Q07231 555 aa19.95■□□□□ 0.78
Trim3-205ENSMUST00000147044 Nlrp6Q91WS2 869 aa19.95■□□□□ 0.78
Trim3-205ENSMUST00000147044 AglF8VPN4 1532 aa19.95■□□□□ 0.78
Trim3-205ENSMUST00000147044 Utp14aQ640M1 767 aaKnown RBP19.95■□□□□ 0.78
Trim3-205ENSMUST00000147044 Tmem131lQ3U3D7 1597 aa19.94■□□□□ 0.78
Trim3-205ENSMUST00000147044 Slc4a3P16283 1227 aa19.94■□□□□ 0.78
Trim3-205ENSMUST00000147044 Neurod2Q62414 383 aa19.94■□□□□ 0.78
Trim3-205ENSMUST00000147044 Ppp2r1aQ76MZ3 589 aa19.94■□□□□ 0.78
Trim3-205ENSMUST00000147044 L3mbtl2P59178 703 aa19.94■□□□□ 0.78
Trim3-205ENSMUST00000147044 Rtl5Q5DTT4 599 aa19.93■□□□□ 0.78
Trim3-205ENSMUST00000147044 Txndc2Q6P902 515 aa19.93■□□□□ 0.78
Trim3-205ENSMUST00000147044 Topbp1Q6ZQF0 1515 aa19.93■□□□□ 0.78
Trim3-205ENSMUST00000147044 Uggt2E9Q4X2 1504 aa19.93■□□□□ 0.78
Trim3-205ENSMUST00000147044 IqubQ8CDK3 788 aa19.92■□□□□ 0.78
Trim3-205ENSMUST00000147044 Exosc9Q9JHI7 438 aaKnown RBP19.92■□□□□ 0.78
Trim3-205ENSMUST00000147044 Skint5A7XUY5 1461 aa19.91■□□□□ 0.78
Trim3-205ENSMUST00000147044 Prrc2bQ7TPM1 1486 aaKnown RBP19.91■□□□□ 0.78
Trim3-205ENSMUST00000147044 Zfp444Q3TDV8 331 aaKnown RBP19.89■□□□□ 0.78
Trim3-205ENSMUST00000147044 Apbb1Q9QXJ1 710 aa19.89■□□□□ 0.78
Trim3-205ENSMUST00000147044 MyclP10166 368 aa19.89■□□□□ 0.77
Trim3-205ENSMUST00000147044 Cdc42bpgQ80UW5 1551 aa19.89■□□□□ 0.77
Trim3-205ENSMUST00000147044 Adgrb3Q80ZF8 1522 aa19.89■□□□□ 0.77
Trim3-205ENSMUST00000147044 Pcdh10E9PXQ7 1057 aa19.88■□□□□ 0.77
Trim3-205ENSMUST00000147044 Ttc37F8VPK0 1563 aa19.88■□□□□ 0.77
Trim3-205ENSMUST00000147044 Abca8aQ8K442 1620 aa19.87■□□□□ 0.77
Trim3-205ENSMUST00000147044 Nolc1E9Q5C9 702 aaKnown RBP19.87■□□□□ 0.77
Trim3-205ENSMUST00000147044 Knl1Q66JQ7 1612 aa19.87■□□□□ 0.77
Trim3-205ENSMUST00000147044 Qser1A2BIE1 1698 aa19.86■□□□□ 0.77
Trim3-205ENSMUST00000147044 Rangap1P46061 589 aaKnown RBP19.85■□□□□ 0.77
Trim3-205ENSMUST00000147044 Senp3Q9EP97 568 aaKnown RBP19.85■□□□□ 0.77
Trim3-205ENSMUST00000147044 Synj2Q9D2G5 1434 aa19.85■□□□□ 0.77
Trim3-205ENSMUST00000147044 Psme1P97371 249 aa19.85■□□□□ 0.77
Trim3-205ENSMUST00000147044 Ercc6l2Q9JIM3 1537 aa19.84■□□□□ 0.77
Trim3-205ENSMUST00000147044 IghaA0A0A6YXW6 389 aa19.83■□□□□ 0.77
Trim3-205ENSMUST00000147044 NgefQ8CHT1 710 aa19.83■□□□□ 0.77
Trim3-205ENSMUST00000147044 Atp2b2Q9R0K7 1198 aa19.83■□□□□ 0.77
Trim3-205ENSMUST00000147044 Plch2A2AP18 1501 aa19.83■□□□□ 0.77
Trim3-205ENSMUST00000147044 Rims1Q99NE5 1463 aa19.83■□□□□ 0.77
Trim3-205ENSMUST00000147044 Gm16486A0A1D5RMD1 1434 aa19.83■□□□□ 0.76
Trim3-205ENSMUST00000147044 Hfm1D3Z4R1 1434 aa19.83■□□□□ 0.76
Trim3-205ENSMUST00000147044 NpatQ8BMA5 1420 aa19.82■□□□□ 0.76
Trim3-205ENSMUST00000147044 Akap12Q9WTQ5 1684 aa19.82■□□□□ 0.76
Trim3-205ENSMUST00000147044 Ppp4r2Q0VGB7 417 aa19.82■□□□□ 0.76
Trim3-205ENSMUST00000147044 Mak16Q8BGS0 296 aaKnown RBP19.82■□□□□ 0.76
Trim3-205ENSMUST00000147044 Lrrc7Q80TE7 1490 aa19.82■□□□□ 0.76
Trim3-205ENSMUST00000147044 Ehbp1l1Q99MS7 1716 aa19.81■□□□□ 0.76
Trim3-205ENSMUST00000147044 Cdk5rap2Q8K389 1822 aa19.8■□□□□ 0.76
Trim3-205ENSMUST00000147044 Talpid3E9PV87 1520 aa19.8■□□□□ 0.76
Trim3-205ENSMUST00000147044 Arid4bA2CG63 1314 aaKnown RBP19.8■□□□□ 0.76
Trim3-205ENSMUST00000147044 Erbb3Q61526 1339 aa19.79■□□□□ 0.76
Trim3-205ENSMUST00000147044 Kiaa0556Q8C753 1610 aa19.78■□□□□ 0.76
Trim3-205ENSMUST00000147044 Hecw2Q6I6G8 1578 aa19.78■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms