RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Dnttip2Q8R2M2 758 aaKnown RBP22.73■■□□□ 1.23
Sort1-203ENSMUST00000135636 Gsto1O09131 240 aa22.73■■□□□ 1.23
Sort1-203ENSMUST00000135636 Mphosph10Q810V0 681 aaKnown RBP22.73■■□□□ 1.23
Sort1-203ENSMUST00000135636 Samd1D3YXK1 519 aa22.73■■□□□ 1.23
Sort1-203ENSMUST00000135636 Mbd3Q9Z2D8 285 aaKnown RBP22.73■■□□□ 1.23
Sort1-203ENSMUST00000135636 EspnQ9ET47 871 aa22.73■■□□□ 1.23
Sort1-203ENSMUST00000135636 GsdmaQ9EST1 446 aa22.72■■□□□ 1.23
Sort1-203ENSMUST00000135636 MpripP97434 1024 aa22.72■■□□□ 1.23
Sort1-203ENSMUST00000135636 Jph4Q80WT0 628 aa22.72■■□□□ 1.23
Sort1-203ENSMUST00000135636 Strn4P58404 760 aa22.71■■□□□ 1.23
Sort1-203ENSMUST00000135636 Tdrd9Q14BI7 1383 aa22.71■■□□□ 1.23
Sort1-203ENSMUST00000135636 Gtf2f1Q3THK3 508 aaKnown RBP22.7■■□□□ 1.22
Sort1-203ENSMUST00000135636 Cfdp1O88271 295 aaKnown RBP22.69■■□□□ 1.22
Sort1-203ENSMUST00000135636 Gsdma3Q5Y4Y6 464 aa22.69■■□□□ 1.22
Sort1-203ENSMUST00000135636 Polr3gQ6NXY9 223 aa22.69■■□□□ 1.22
Sort1-203ENSMUST00000135636 March6Q6ZQ89 909 aa22.69■■□□□ 1.22
Sort1-203ENSMUST00000135636 NexnQ7TPW1 607 aa22.69■■□□□ 1.22
Sort1-203ENSMUST00000135636 G3bp1P97855 465 aaKnown RBP22.69■■□□□ 1.22
Sort1-203ENSMUST00000135636 Mapk8ip1Q9WVI9 707 aa22.68■■□□□ 1.22
Sort1-203ENSMUST00000135636 Dhx29Q6PGC1 1365 aaKnown RBP22.68■■□□□ 1.22
Sort1-203ENSMUST00000135636 Drc7Q6V3W6 876 aa22.67■■□□□ 1.22
Sort1-203ENSMUST00000135636 Rab11fip3Q8CHD8 1047 aa22.67■■□□□ 1.22
Sort1-203ENSMUST00000135636 Stk3Q9JI10 497 aa22.67■■□□□ 1.22
Sort1-203ENSMUST00000135636 Arhgap5P97393 1501 aa22.66■■□□□ 1.22
Sort1-203ENSMUST00000135636 Gm21663A0A0G2JE01 267 aa22.66■■□□□ 1.22
Sort1-203ENSMUST00000135636 Gm7361D3Z6R1 267 aa22.66■■□□□ 1.22
Sort1-203ENSMUST00000135636 5031410I06RikE9Q4E0 267 aa22.66■■□□□ 1.22
Sort1-203ENSMUST00000135636 Gm1979E9QAN3 267 aa22.66■■□□□ 1.22
Sort1-203ENSMUST00000135636 Gm5862K7N5V5 267 aa22.66■■□□□ 1.22
Sort1-203ENSMUST00000135636 Gm10220K7N660 267 aa22.66■■□□□ 1.22
Sort1-203ENSMUST00000135636 Fkbp4P30416 458 aa22.66■■□□□ 1.22
Sort1-203ENSMUST00000135636 Egfem1Q8C088 590 aa22.66■■□□□ 1.22
Sort1-203ENSMUST00000135636 AU015836B2RUM3 263 aa22.65■■□□□ 1.22
Sort1-203ENSMUST00000135636 Hmox1P14901 289 aa22.65■■□□□ 1.22
Sort1-203ENSMUST00000135636 Gm21680A0A0G2JGR8 267 aa22.65■■□□□ 1.22
Sort1-203ENSMUST00000135636 Usp47Q8BY87 1376 aa22.65■■□□□ 1.22
Sort1-203ENSMUST00000135636 Tpm2P58774 284 aa22.64■■□□□ 1.22
Sort1-203ENSMUST00000135636 Cald1E9QA15 768 aaKnown RBP22.64■■□□□ 1.21
Sort1-203ENSMUST00000135636 Atp2b2Q9R0K7 1198 aa22.64■■□□□ 1.21
Sort1-203ENSMUST00000135636 Tpm3P21107 285 aaKnown RBP22.63■■□□□ 1.21
Sort1-203ENSMUST00000135636 UacaQ8CGB3 1411 aa22.63■■□□□ 1.21
Sort1-203ENSMUST00000135636 Gabpb2P81069 414 aa22.63■■□□□ 1.21
Sort1-203ENSMUST00000135636 Arid3aQ62431 601 aa22.62■■□□□ 1.21
Sort1-203ENSMUST00000135636 Synj1Q8CHC4 1574 aa22.62■■□□□ 1.21
Sort1-203ENSMUST00000135636 Ipo8Q7TMY7 1010 aa22.62■■□□□ 1.21
Sort1-203ENSMUST00000135636 Sycp2Q9CUU3 1500 aa22.62■■□□□ 1.21
Sort1-203ENSMUST00000135636 Dennd6aQ8BH65 605 aa22.62■■□□□ 1.21
Sort1-203ENSMUST00000135636 Ric3Q8BPM6 367 aa22.61■■□□□ 1.21
Sort1-203ENSMUST00000135636 Map3k5O35099 1380 aa22.61■■□□□ 1.21
Sort1-203ENSMUST00000135636 CftrP26361 1476 aa22.61■■□□□ 1.21
Sort1-203ENSMUST00000135636 Erich4Q3UNU4 136 aa22.61■■□□□ 1.21
Sort1-203ENSMUST00000135636 Ncoa2Q61026 1462 aa22.6■■□□□ 1.21
Sort1-203ENSMUST00000135636 Slc5a4bQ91ZP4 660 aa22.6■■□□□ 1.21
Sort1-203ENSMUST00000135636 TefQ9JLC6 301 aa22.6■■□□□ 1.21
Sort1-203ENSMUST00000135636 Fam50bQ9WTJ8 334 aa22.6■■□□□ 1.21
Sort1-203ENSMUST00000135636 Urb2E9Q7L1 1524 aaKnown RBP22.6■■□□□ 1.21
Sort1-203ENSMUST00000135636 Larp1bA0A0A6YXJ7 370 aaKnown RBP22.59■■□□□ 1.21
Sort1-203ENSMUST00000135636 A0A0U1RNP2 1173 aa22.59■■□□□ 1.21
Sort1-203ENSMUST00000135636 LrpprcQ6PB66 1392 aaKnown RBP22.59■■□□□ 1.21
Sort1-203ENSMUST00000135636 Cplx1P63040 134 aa22.58■■□□□ 1.21
Sort1-203ENSMUST00000135636 Rapgef2Q8CHG7 1496 aa22.57■■□□□ 1.2
Sort1-203ENSMUST00000135636 Carmil1Q6EDY6 1374 aa22.57■■□□□ 1.2
Sort1-203ENSMUST00000135636 Stard8Q8K031 1019 aa22.56■■□□□ 1.2
Sort1-203ENSMUST00000135636 Dnai1Q8C0M8 701 aa22.56■■□□□ 1.2
Sort1-203ENSMUST00000135636 Phactr2B1AVP0 632 aa22.55■■□□□ 1.2
Sort1-203ENSMUST00000135636 Washc4Q3UMB9 1173 aa22.55■■□□□ 1.2
Sort1-203ENSMUST00000135636 ApobrQ8VBT6 942 aa22.55■■□□□ 1.2
Sort1-203ENSMUST00000135636 Ppp4r3bQ922R5 820 aa22.54■■□□□ 1.2
Sort1-203ENSMUST00000135636 Me1P06801 572 aa22.54■■□□□ 1.2
Sort1-203ENSMUST00000135636 Sv2bQ8BG39 683 aa22.54■■□□□ 1.2
Sort1-203ENSMUST00000135636 Sf3a1Q8K4Z5 791 aaKnown RBP22.52■■□□□ 1.2
Sort1-203ENSMUST00000135636 UvssaQ9D479 717 aa22.52■■□□□ 1.2
Sort1-203ENSMUST00000135636 Fmnl2A2APV2 1086 aa22.51■■□□□ 1.19
Sort1-203ENSMUST00000135636 Rec8Q8C5S7 591 aa22.51■■□□□ 1.19
Sort1-203ENSMUST00000135636 Ttc19Q8CC21 365 aa22.51■■□□□ 1.19
Sort1-203ENSMUST00000135636 Pde4bB1AWC9 736 aa22.51■■□□□ 1.19
Sort1-203ENSMUST00000135636 Fam184bQ0KK56 942 aa22.51■■□□□ 1.19
Sort1-203ENSMUST00000135636 Sycp1Q62209 993 aa22.5■■□□□ 1.19
Sort1-203ENSMUST00000135636 Puf60Q3UEB3 564 aaKnown RBP22.5■■□□□ 1.19
Sort1-203ENSMUST00000135636 Agtpbp1Q641K1 1218 aa22.5■■□□□ 1.19
Sort1-203ENSMUST00000135636 EappQ5BU09 281 aa22.5■■□□□ 1.19
Sort1-203ENSMUST00000135636 SlkO54988 1233 aa22.5■■□□□ 1.19
Sort1-203ENSMUST00000135636 Hnrnpul1Q8VDM6 859 aaKnown RBP22.5■■□□□ 1.19
Sort1-203ENSMUST00000135636 Esx1O88933 382 aa22.49■■□□□ 1.19
Sort1-203ENSMUST00000135636 Nap1l3Q794H2 544 aa22.49■■□□□ 1.19
Sort1-203ENSMUST00000135636 Kcnh8P59111 1102 aa22.49■■□□□ 1.19
Sort1-203ENSMUST00000135636 Kiaa0754Q69ZZ9 979 aa22.49■■□□□ 1.19
Sort1-203ENSMUST00000135636 Cplx2P84086 134 aa22.49■■□□□ 1.19
Sort1-203ENSMUST00000135636 Cabp2Q9JLK4 216 aa22.48■■□□□ 1.19
Sort1-203ENSMUST00000135636 HnrnpmQ9D0E1 729 aaKnown RBP22.48■■□□□ 1.19
Sort1-203ENSMUST00000135636 Themis2Q91YX0 663 aa22.47■■□□□ 1.19
Sort1-203ENSMUST00000135636 Smarca4Q3TKT4 1613 aaKnown RBP22.47■■□□□ 1.19
Sort1-203ENSMUST00000135636 Calcoco2A2A6M5 331 aa22.47■■□□□ 1.19
Sort1-203ENSMUST00000135636 PtmsQ9D0J8 101 aaKnown RBP22.47■■□□□ 1.19
Sort1-203ENSMUST00000135636 Nol12Q8BG17 217 aa22.47■■□□□ 1.19
Sort1-203ENSMUST00000135636 GnpatP98192 678 aa22.46■■□□□ 1.19
Sort1-203ENSMUST00000135636 Gnl3lQ6PGG6 577 aaKnown RBP22.46■■□□□ 1.19
Sort1-203ENSMUST00000135636 Rfx1P48377 963 aa22.46■■□□□ 1.19
Sort1-203ENSMUST00000135636 VeztQ3ZK22 780 aa22.45■■□□□ 1.18
Sort1-203ENSMUST00000135636 Sel1lQ9Z2G6 790 aa22.45■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms