RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Supt16hQ920B9 1047 aa14.67□□□□□ -0.06
Ift88-201ENSMUST00000122063 Cnga1P29974 684 aa14.66□□□□□ -0.06
Ift88-201ENSMUST00000122063 Abca6Q8K441 1624 aa14.65□□□□□ -0.06
Ift88-201ENSMUST00000122063 Gtf2e1Q9D0D5 440 aa14.65□□□□□ -0.06
Ift88-201ENSMUST00000122063 Fam184bQ0KK56 942 aa14.64□□□□□ -0.07
Ift88-201ENSMUST00000122063 Usp40Q8BWR4 1235 aa14.64□□□□□ -0.07
Ift88-201ENSMUST00000122063 Esx1O88933 382 aa14.64□□□□□ -0.07
Ift88-201ENSMUST00000122063 Nos1Q9Z0J4 1429 aa14.64□□□□□ -0.07
Ift88-201ENSMUST00000122063 Pabpn1Q8CCS6 302 aaKnown RBP14.63□□□□□ -0.07
Ift88-201ENSMUST00000122063 Nlrp6Q91WS2 869 aa14.63□□□□□ -0.07
Ift88-201ENSMUST00000122063 Tubgcp6G5E8P0 1769 aa14.63□□□□□ -0.07
Ift88-201ENSMUST00000122063 CrbnQ8C7D2 445 aa14.62□□□□□ -0.07
Ift88-201ENSMUST00000122063 OvosQ3UU35 1456 aa14.62□□□□□ -0.07
Ift88-201ENSMUST00000122063 Znf518aB2RRF6 1478 aaKnown RBP14.61□□□□□ -0.07
Ift88-201ENSMUST00000122063 NeflP08551 543 aa14.61□□□□□ -0.07
Ift88-201ENSMUST00000122063 Ptch1Q61115 1434 aa14.6□□□□□ -0.07
Ift88-201ENSMUST00000122063 Ppp2r1aQ76MZ3 589 aa14.6□□□□□ -0.07
Ift88-201ENSMUST00000122063 Dcaf11Q91VU6 549 aa14.6□□□□□ -0.07
Ift88-201ENSMUST00000122063 Plch2A2AP18 1501 aa14.6□□□□□ -0.07
Ift88-201ENSMUST00000122063 Erbb3Q61526 1339 aa14.6□□□□□ -0.07
Ift88-201ENSMUST00000122063 Zmym4A2A791 1549 aaKnown RBP14.59□□□□□ -0.07
Ift88-201ENSMUST00000122063 Uggt2E9Q4X2 1504 aa14.59□□□□□ -0.07
Ift88-201ENSMUST00000122063 Kif7B7ZNG0 1348 aa14.58□□□□□ -0.08
Ift88-201ENSMUST00000122063 Atp1b4Q99ME6 356 aa14.58□□□□□ -0.08
Ift88-201ENSMUST00000122063 AnkarA2RT91 1465 aa14.58□□□□□ -0.08
Ift88-201ENSMUST00000122063 Gm16486A0A1D5RMD1 1434 aa14.58□□□□□ -0.08
Ift88-201ENSMUST00000122063 Gli2Q0VGT2 1544 aa14.57□□□□□ -0.08
Ift88-201ENSMUST00000122063 Fndc1E9Q043 1732 aa14.57□□□□□ -0.08
Ift88-201ENSMUST00000122063 Iqgap3F8VQ29 1632 aa14.56□□□□□ -0.08
Ift88-201ENSMUST00000122063 Myo3aQ8K3H5 1613 aa14.56□□□□□ -0.08
Ift88-201ENSMUST00000122063 Sbno1Q689Z5 1390 aa14.56□□□□□ -0.08
Ift88-201ENSMUST00000122063 Rab3gap2Q8BMG7 1366 aa14.56□□□□□ -0.08
Ift88-201ENSMUST00000122063 Prex1Q69ZK0 1650 aa14.56□□□□□ -0.08
Ift88-201ENSMUST00000122063 Puf60Q3UEB3 564 aaKnown RBP14.56□□□□□ -0.08
Ift88-201ENSMUST00000122063 Stag3O70576 1240 aa14.56□□□□□ -0.08
Ift88-201ENSMUST00000122063 AatkQ80YE4 1365 aa14.55□□□□□ -0.08
Ift88-201ENSMUST00000122063 Myt1Q8CFC2 1127 aa14.55□□□□□ -0.08
Ift88-201ENSMUST00000122063 Neurod2Q62414 383 aa14.54□□□□□ -0.08
Ift88-201ENSMUST00000122063 Tex14Q7M6U3 1450 aa14.54□□□□□ -0.08
Ift88-201ENSMUST00000122063 Upf2A2AT37 1269 aaKnown RBP14.54□□□□□ -0.08
Ift88-201ENSMUST00000122063 Pak3Q61036 559 aa14.54□□□□□ -0.08
Ift88-201ENSMUST00000122063 Apbb1Q9QXJ1 710 aa14.54□□□□□ -0.08
Ift88-201ENSMUST00000122063 Col17a1Q07563 1470 aa14.53□□□□□ -0.08
Ift88-201ENSMUST00000122063 Kank1E9Q238 1360 aa14.53□□□□□ -0.08
Ift88-201ENSMUST00000122063 Kif16bB1AVY7 1312 aa14.53□□□□□ -0.08
Ift88-201ENSMUST00000122063 Pola1P33609 1465 aa14.52□□□□□ -0.08
Ift88-201ENSMUST00000122063 Gm156Q58A37 223 aa14.52□□□□□ -0.09
Ift88-201ENSMUST00000122063 Itsn2Q9Z0R6 1659 aa14.52□□□□□ -0.09
Ift88-201ENSMUST00000122063 Stk26Q99JT2 416 aa14.51□□□□□ -0.09
Ift88-201ENSMUST00000122063 Cep152A2AUM9 1736 aaKnown RBP14.51□□□□□ -0.09
Ift88-201ENSMUST00000122063 Ak9G3UYQ4 1894 aa14.5□□□□□ -0.09
Ift88-201ENSMUST00000122063 Stard8Q8K031 1019 aa14.5□□□□□ -0.09
Ift88-201ENSMUST00000122063 Speer4f1Q9D5Q6 258 aa14.5□□□□□ -0.09
Ift88-201ENSMUST00000122063 Tmem131lQ3U3D7 1597 aa14.49□□□□□ -0.09
Ift88-201ENSMUST00000122063 Abca8aQ8K442 1620 aa14.49□□□□□ -0.09
Ift88-201ENSMUST00000122063 Liat1Q810M6 228 aa14.49□□□□□ -0.09
Ift88-201ENSMUST00000122063 Kdm5aQ3UXZ9 1690 aa14.48□□□□□ -0.09
Ift88-201ENSMUST00000122063 Adgrb3Q80ZF8 1522 aa14.48□□□□□ -0.09
Ift88-201ENSMUST00000122063 IqubQ8CDK3 788 aa14.47□□□□□ -0.09
Ift88-201ENSMUST00000122063 Rims1Q99NE5 1463 aa14.47□□□□□ -0.09
Ift88-201ENSMUST00000122063 Nphp4P59240 1425 aa14.46□□□□□ -0.09
Ift88-201ENSMUST00000122063 Cfap65Q3V0B4 1847 aa14.46□□□□□ -0.09
Ift88-201ENSMUST00000122063 Cdk5rap2Q8K389 1822 aa14.46□□□□□ -0.09
Ift88-201ENSMUST00000122063 Topbp1Q6ZQF0 1515 aa14.46□□□□□ -0.09
Ift88-201ENSMUST00000122063 Ppp1r18Q8BQ30 594 aa14.46□□□□□ -0.09
Ift88-201ENSMUST00000122063 Tcerg1Q8CGF7 1100 aaKnown RBP14.46□□□□□ -0.09
Ift88-201ENSMUST00000122063 Ehbp1l1Q99MS7 1716 aa14.46□□□□□ -0.1
Ift88-201ENSMUST00000122063 Arid4bA2CG63 1314 aaKnown RBP14.46□□□□□ -0.1
Ift88-201ENSMUST00000122063 Depdc5P61460 1591 aa14.45□□□□□ -0.1
Ift88-201ENSMUST00000122063 Atp10aO54827 1508 aa14.45□□□□□ -0.1
Ift88-201ENSMUST00000122063 Dip2cE9PWR4 1557 aa14.44□□□□□ -0.1
Ift88-201ENSMUST00000122063 Golga2Q921M4 999 aa14.44□□□□□ -0.1
Ift88-201ENSMUST00000122063 AU022751B1B0V2 589 aa14.44□□□□□ -0.1
Ift88-201ENSMUST00000122063 Yeats2Q3TUF7 1407 aa14.44□□□□□ -0.1
Ift88-201ENSMUST00000122063 Exosc9Q9JHI7 438 aaKnown RBP14.43□□□□□ -0.1
Ift88-201ENSMUST00000122063 Zranb1Q7M760 708 aa14.42□□□□□ -0.1
Ift88-201ENSMUST00000122063 Efcab6Q6P1E8 1516 aa14.41□□□□□ -0.1
Ift88-201ENSMUST00000122063 Cdc42bpgQ80UW5 1551 aa14.41□□□□□ -0.1
Ift88-201ENSMUST00000122063 Lrrc7Q80TE7 1490 aa14.41□□□□□ -0.1
Ift88-201ENSMUST00000122063 Rwdd1Q9CQK7 243 aa14.41□□□□□ -0.1
Ift88-201ENSMUST00000122063 Myom2Q14BI5 1463 aa14.41□□□□□ -0.1
Ift88-201ENSMUST00000122063 RereQ80TZ9 1558 aa14.41□□□□□ -0.1
Ift88-201ENSMUST00000122063 Shq1Q7TMX5 569 aa14.4□□□□□ -0.1
Ift88-201ENSMUST00000122063 Talpid3E9PV87 1520 aa14.4□□□□□ -0.1
Ift88-201ENSMUST00000122063 B4galnt3Q6L8S8 986 aa14.4□□□□□ -0.1
Ift88-201ENSMUST00000122063 Ccdc30Q8BVF4 654 aa14.4□□□□□ -0.1
Ift88-201ENSMUST00000122063 Polr3glQ8R0C0 218 aa14.4□□□□□ -0.1
Ift88-201ENSMUST00000122063 Mink1Q9JM52 1308 aa14.4□□□□□ -0.1
Ift88-201ENSMUST00000122063 AdgbG3UZ78 1657 aa14.4□□□□□ -0.1
Ift88-201ENSMUST00000122063 Prkrip1Q9CWV6 186 aaKnown RBP14.39□□□□□ -0.11
Ift88-201ENSMUST00000122063 Rtl5Q5DTT4 599 aa14.39□□□□□ -0.11
Ift88-201ENSMUST00000122063 Ecm2Q5FW85 670 aa14.39□□□□□ -0.11
Ift88-201ENSMUST00000122063 Atf7ipQ7TT18 1306 aa14.38□□□□□ -0.11
Ift88-201ENSMUST00000122063 Plekhh1Q80TI1 1356 aa14.38□□□□□ -0.11
Ift88-201ENSMUST00000122063 PalldQ9ET54 1408 aa14.38□□□□□ -0.11
Ift88-201ENSMUST00000122063 Clasp1Q80TV8 1535 aaKnown RBP14.38□□□□□ -0.11
Ift88-201ENSMUST00000122063 Uggt1Q6P5E4 1551 aa14.38□□□□□ -0.11
Ift88-201ENSMUST00000122063 Prdm2A2A7B5 1709 aaKnown RBP14.38□□□□□ -0.11
Ift88-201ENSMUST00000122063 CenpjQ569L8 1344 aa14.38□□□□□ -0.11
Ift88-201ENSMUST00000122063 AglF8VPN4 1532 aa14.37□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms