RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Mug2P28666 1451 aa14.3□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Rad21Q61550 635 aaKnown RBP14.3□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 AglF8VPN4 1532 aa14.29□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Clstn2Q9ER65 966 aa14.29□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Hsp90aa1P07901 733 aaKnown RBP14.28□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Nos1Q9Z0J4 1429 aa14.28□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Naip6Q9JIB6 1403 aa14.28□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Chrna2Q91X60 512 aa14.28□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Cd109Q8R422 1442 aa14.27□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 DaxxO35613 739 aa14.27□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 4933416C03RikQ3V063 378 aa14.27□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 NeflP08551 543 aa14.26□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 ShprhQ7TPQ3 1674 aa14.26□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Abca17E9PX95 1733 aa14.26□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Kdm5cP41230 1554 aa14.25□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Myom3A2ABU4 1439 aa14.25□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 PtprgQ05909 1442 aa14.25□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 DroshaQ5HZJ0 1373 aaKnown RBP14.25□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Yeats2Q3TUF7 1407 aa14.24□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 DekQ7TNV0 380 aaKnown RBP14.24□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Dip2cE9PWR4 1557 aa14.24□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Erich6D3Z6S9 713 aa14.24□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Kif1bQ60575 1816 aaKnown RBP14.23□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Atp7aQ64430 1491 aa14.23□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Arid3aQ62431 601 aa14.23□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Znf518aB2RRF6 1478 aaKnown RBP14.22□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Cdk13Q69ZA1 1511 aaKnown RBP14.21□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Rpgrip1lQ8CG73 1264 aa14.21□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Irx6Q9ER75 438 aa14.21□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Fndc1E9Q043 1732 aa14.21□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Erbb3Q61526 1339 aa14.21□□□□□ -0.13
Prpf40b-202ENSMUST00000118287 Atp10aO54827 1508 aa14.21□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 4930567H17RikQ3V0K5 233 aa14.21□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Iqcf3Q9D498 203 aa14.21□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 RereQ80TZ9 1558 aa14.21□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Rock2P70336 1388 aa14.2□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 B4galnt3Q6L8S8 986 aa14.2□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Cul9Q80TT8 1865 aa14.2□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 RalgapbQ8BQZ4 1484 aa14.2□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Dnajc5gQ8C632 165 aa14.19□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Gli2Q0VGT2 1544 aa14.19□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Myo5cE9Q1F5 1742 aa14.19□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Cpsf1Q9EPU4 1441 aaKnown RBP14.18□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 AcrbpQ3V140 540 aa14.18□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Robo2Q7TPD3 1470 aa14.17□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Zfp444Q3TDV8 331 aaKnown RBP14.17□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Dot1lQ6XZL8 1540 aa14.17□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Polr3aB2RXC6 1390 aa14.17□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Kiaa0556Q8C753 1610 aa14.17□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Q7TT23 1179 aa14.17□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Cfap65Q3V0B4 1847 aa14.17□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Abca6Q8K441 1624 aa14.16□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Dnajc5P60904 198 aa14.16□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Dbr1Q923B1 550 aa14.16□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Tarbp1E9Q368 1579 aa14.16□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Ythdc1E9Q5K9 736 aaKnown RBP14.16□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Ccdc9Q8VC31 543 aaKnown RBP14.16□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 AdgbG3UZ78 1657 aa14.15□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Hecw2Q6I6G8 1578 aa14.15□□□□□ -0.14
Prpf40b-202ENSMUST00000118287 Synj2Q9D2G5 1434 aa14.14□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Sall3Q62255 1320 aa14.14□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 CanxP35564 591 aaKnown RBP14.14□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Dnttip2Q8R2M2 758 aaKnown RBP14.14□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Armcx1Q9CX83 456 aa14.14□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Zscan21Q07231 555 aa14.14□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Kcnn1Q9EQR3 537 aa14.14□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Cdc42bpgQ80UW5 1551 aa14.14□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Znf692Q3U381 531 aa14.13□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Skap1Q3UUV5 355 aa14.13□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Nsd2Q8BVE8 1365 aa14.13□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Ttll13A4Q9F6 804 aa14.13□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Ttc21bQ0HA38 1315 aa14.13□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Rock1P70335 1354 aa14.12□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Topbp1Q6ZQF0 1515 aa14.12□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Iqgap1Q9JKF1 1657 aaKnown RBP14.12□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Prex1Q69ZK0 1650 aa14.12□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Mak16Q8BGS0 296 aaKnown RBP14.12□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Pcdh10E9PXQ7 1057 aa14.11□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Stk24Q99KH8 431 aa14.11□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Edc4Q3UJB9 1406 aaKnown RBP14.11□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Ylpm1Q9R0I7 1386 aaKnown RBP14.11□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Kank1E9Q238 1360 aa14.09□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Prkrip1Q9CWV6 186 aaKnown RBP14.09□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Apbb1Q9QXJ1 710 aa14.09□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Qser1A2BIE1 1698 aa14.09□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Brd2Q7JJ13 798 aaKnown RBP14.09□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 Plch2A2AP18 1501 aa14.09□□□□□ -0.15
Prpf40b-202ENSMUST00000118287 DmtnQ9WV69 405 aa14.08□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 Mroh3A0A1D5RM54 893 aa14.08□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 Afap1Q80YS6 731 aa14.08□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 Ifit1bl1D3Z6F0 470 aa14.07□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 AnkarA2RT91 1465 aa14.07□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 Sart3Q9JLI8 962 aaKnown RBP14.06□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 Tmem131lQ3U3D7 1597 aa14.06□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 Chmp4bQ9D8B3 224 aaKnown RBP14.06□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 Esx1O88933 382 aa14.06□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 Pank3Q8R2W9 370 aa14.06□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 Uggt2E9Q4X2 1504 aa14.04□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 CrbnQ8C7D2 445 aa14.04□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 NpatQ8BMA5 1420 aa14.03□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms