RNA–Protein interactions for RNA: ENSMUST00000111046.8

Bdnf-206, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,819 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-206ENSMUST00000111046 Mug2P28666 1451 aa11.42□□□□□ -0.58
Bdnf-206ENSMUST00000111046 Safb2Q80YR5 991 aaKnown RBP11.41□□□□□ -0.58
Bdnf-206ENSMUST00000111046 Sall3Q62255 1320 aa11.41□□□□□ -0.58
Bdnf-206ENSMUST00000111046 PrxO55103 1391 aa11.41□□□□□ -0.58
Bdnf-206ENSMUST00000111046 Robo2Q7TPD3 1470 aa11.41□□□□□ -0.58
Bdnf-206ENSMUST00000111046 Mbd5B1AYB6 1498 aa11.4□□□□□ -0.58
Bdnf-206ENSMUST00000111046 Puf60Q3UEB3 564 aaKnown RBP11.4□□□□□ -0.58
Bdnf-206ENSMUST00000111046 B4galnt3Q6L8S8 986 aa11.4□□□□□ -0.58
Bdnf-206ENSMUST00000111046 Zfp444Q3TDV8 331 aaKnown RBP11.4□□□□□ -0.58
Bdnf-206ENSMUST00000111046 Dbr1Q923B1 550 aa11.4□□□□□ -0.58
Bdnf-206ENSMUST00000111046 Mapk8ip3Q9ESN9 1337 aa11.4□□□□□ -0.59
Bdnf-206ENSMUST00000111046 AI481877A2ALV5 1481 aa11.4□□□□□ -0.59
Bdnf-206ENSMUST00000111046 DaxxO35613 739 aa11.39□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Zfyve16Q80U44 1528 aa11.39□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Adgrl2Q8JZZ7 1487 aa11.39□□□□□ -0.59
Bdnf-206ENSMUST00000111046 ArxO35085 564 aa11.39□□□□□ -0.59
Bdnf-206ENSMUST00000111046 U2af1Q9D883 239 aaKnown RBP11.39□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Ppp2r1aQ76MZ3 589 aa11.38□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Trim30dE9PWL0 497 aa11.38□□□□□ -0.59
Bdnf-206ENSMUST00000111046 RalgapbQ8BQZ4 1484 aa11.38□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Ttc21bQ0HA38 1315 aa11.38□□□□□ -0.59
Bdnf-206ENSMUST00000111046 CenpjQ569L8 1344 aa11.38□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Dot1lQ6XZL8 1540 aa11.37□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Naip6Q9JIB6 1403 aa11.37□□□□□ -0.59
Bdnf-206ENSMUST00000111046 CanxP35564 591 aaKnown RBP11.37□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Ythdc2B2RR83 1445 aaKnown RBP11.37□□□□□ -0.59
Bdnf-206ENSMUST00000111046 PtprgQ05909 1442 aa11.37□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Chmp5Q9D7S9 219 aa11.36□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Cpsf1Q9EPU4 1441 aaKnown RBP11.36□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Amer1Q7TS75 1132 aa11.36□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Iqgap1Q9JKF1 1657 aaKnown RBP11.36□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Cfap74Q3UY96 1578 aa11.36□□□□□ -0.59
Bdnf-206ENSMUST00000111046 L3mbtl2P59178 703 aa11.35□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Utp14aQ640M1 767 aaKnown RBP11.35□□□□□ -0.59
Bdnf-206ENSMUST00000111046 ShprhQ7TPQ3 1674 aa11.35□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Tmem131lQ3U3D7 1597 aa11.35□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Rab3gap2Q8BMG7 1366 aa11.35□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Shq1Q7TMX5 569 aa11.35□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Cdk13Q69ZA1 1511 aaKnown RBP11.35□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Ylpm1Q9R0I7 1386 aaKnown RBP11.34□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Prdm2A2A7B5 1709 aaKnown RBP11.34□□□□□ -0.59
Bdnf-206ENSMUST00000111046 Rsph4aQ8BYM7 716 aa11.32□□□□□ -0.6
Bdnf-206ENSMUST00000111046 GsdmaQ9EST1 446 aa11.32□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Kif16bB1AVY7 1312 aa11.32□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Fndc1E9Q043 1732 aa11.32□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Mink1Q9JM52 1308 aa11.31□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Tsen2Q6P7W5 460 aa11.31□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Kcnh8P59111 1102 aa11.31□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Ralbp1Q62172 648 aa11.31□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Ccdc30Q8BVF4 654 aa11.31□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Armcx1Q9CX83 456 aa11.31□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Myo5cE9Q1F5 1742 aa11.31□□□□□ -0.6
Bdnf-206ENSMUST00000111046 EspnQ9ET47 871 aa11.3□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Cep170Q6A065 1588 aa11.3□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Hsp90ab1P11499 724 aaKnown RBP11.3□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Ecm2Q5FW85 670 aa11.3□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Gm6268A2A3U9 297 aa11.3□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Ksr2Q3UVC0 959 aa11.29□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Txndc2Q6P902 515 aa11.29□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Prkrip1Q9CWV6 186 aaKnown RBP11.29□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Tubgcp6G5E8P0 1769 aa11.29□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Birc3O08863 600 aa11.29□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Psme1P97371 249 aa11.29□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Znf316Q6PGE4 1016 aa11.28□□□□□ -0.6
Bdnf-206ENSMUST00000111046 NudcO35685 332 aaKnown RBP11.28□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Ccdc27Q3V036 639 aa11.28□□□□□ -0.6
Bdnf-206ENSMUST00000111046 4930567H17RikQ3V0K5 233 aa11.28□□□□□ -0.6
Bdnf-206ENSMUST00000111046 NgefQ8CHT1 710 aa11.28□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Ipo9Q91YE6 1041 aa11.28□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Gapvd1Q6PAR5 1458 aa11.28□□□□□ -0.6
Bdnf-206ENSMUST00000111046 Tarbp1E9Q368 1579 aa11.27□□□□□ -0.61
Bdnf-206ENSMUST00000111046 OvosQ3UU35 1456 aa11.27□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Usp54Q8BL06 1588 aaKnown RBP11.27□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Adamts13Q769J6 1426 aa11.27□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Kiaa0556Q8C753 1610 aa11.26□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Ppm1gQ61074 542 aa11.26□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Pak3Q61036 559 aa11.26□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Q9D9H8 365 aa11.26□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Plekhh1Q80TI1 1356 aa11.25□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Kdm5cP41230 1554 aa11.24□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Ccar1Q8CH18 1146 aaKnown RBP11.24□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Cul9Q80TT8 1865 aa11.24□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Gsto1O09131 240 aa11.23□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Atp2b2Q9R0K7 1198 aa11.23□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Slc52a2Q9D8F3 450 aa11.23□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Nos1Q9Z0J4 1429 aa11.23□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Trpm1Q2TV84 1622 aa11.23□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Hsp90aa1P07901 733 aaKnown RBP11.23□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Plin1Q8CGN5 517 aa11.23□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Topbp1Q6ZQF0 1515 aa11.23□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Afap1Q80YS6 731 aa11.22□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Iqcf3Q9D498 203 aa11.22□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Ppip5k1A2ARP1 1436 aa11.22□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Edc4Q3UJB9 1406 aaKnown RBP11.22□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Fgd1P52734 960 aa11.21□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Ak9G3UYQ4 1894 aa11.21□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Kank1E9Q238 1360 aa11.21□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Tmco5bQ80X59 307 aa11.21□□□□□ -0.61
Bdnf-206ENSMUST00000111046 Col17a1Q07563 1470 aa11.21□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Abcc6Q9R1S7 1498 aa11.21□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms