RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 Mroh2aD3Z750 1679 aa10.81□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Rab3gap2Q8BMG7 1366 aa10.8□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Kif16bB1AVY7 1312 aa10.8□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Znf316Q6PGE4 1016 aa10.8□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Fmn2Q9JL04 1578 aa10.8□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Amer1Q7TS75 1132 aa10.79□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Pprc1Q6NZN1 1644 aa10.79□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Rrbp1Q99PL5 1605 aaKnown RBP10.79□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Gm6268A2A3U9 297 aa10.79□□□□□ -0.68
Bdnf-202ENSMUST00000111042 NgefQ8CHT1 710 aa10.79□□□□□ -0.68
Bdnf-202ENSMUST00000111042 4930567H17RikQ3V0K5 233 aa10.78□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Tsen2Q6P7W5 460 aa10.78□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Ccdc30Q8BVF4 654 aa10.78□□□□□ -0.68
Bdnf-202ENSMUST00000111042 GsdmaQ9EST1 446 aa10.78□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Pak3Q61036 559 aa10.78□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Hsp90ab1P11499 724 aaKnown RBP10.78□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Ylpm1Q9R0I7 1386 aaKnown RBP10.78□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Ksr2Q3UVC0 959 aa10.78□□□□□ -0.68
Bdnf-202ENSMUST00000111042 Birc3O08863 600 aa10.77□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Cfap74Q3UY96 1578 aa10.77□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Txndc2Q6P902 515 aa10.77□□□□□ -0.69
Bdnf-202ENSMUST00000111042 EspnQ9ET47 871 aa10.77□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Setd1bQ8CFT2 1985 aa10.76□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Lamc1P02468 1607 aaKnown RBP10.76□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Setbp1Q9Z180 1582 aa10.76□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Psme1P97371 249 aa10.76□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Fam208aQ69ZR9 1610 aaKnown RBP10.75□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Ralbp1Q62172 648 aa10.75□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Ipo9Q91YE6 1041 aa10.75□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Prkrip1Q9CWV6 186 aaKnown RBP10.75□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Supt6hQ62383 1726 aaKnown RBP10.75□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Plin1Q8CGN5 517 aa10.75□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Kif14L0N7N1 1674 aaKnown RBP10.75□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Q9D9H8 365 aa10.75□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Dnmt1P13864 1620 aaKnown RBP10.74□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Ccdc27Q3V036 639 aa10.74□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Senp3Q9EP97 568 aaKnown RBP10.73□□□□□ -0.69
Bdnf-202ENSMUST00000111042 OvosQ3UU35 1456 aa10.73□□□□□ -0.69
Bdnf-202ENSMUST00000111042 ChgaP26339 463 aaKnown RBP10.73□□□□□ -0.69
Bdnf-202ENSMUST00000111042 NudcO35685 332 aaKnown RBP10.72□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Znf330Q922H9 316 aa10.72□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Eif4g3Q80XI3 1579 aaKnown RBP10.71□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Afap1Q80YS6 731 aa10.71□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Rsph4aQ8BYM7 716 aa10.71□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Plekhh1Q80TI1 1356 aa10.71□□□□□ -0.69
Bdnf-202ENSMUST00000111042 1700019A02RikA0A087WPV9 146 aa10.71□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Cluap1Q8R3P7 413 aa10.71□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Atp2b2Q9R0K7 1198 aa10.71□□□□□ -0.69
Bdnf-202ENSMUST00000111042 Apaf1O88879 1249 aa10.7□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Ppm1gQ61074 542 aa10.7□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Tmco5bQ80X59 307 aa10.7□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Ccar1Q8CH18 1146 aaKnown RBP10.7□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Znf608Q56A10 1511 aa10.7□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Hsp90aa1P07901 733 aaKnown RBP10.7□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Mbd5B1AYB6 1498 aa10.7□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Gsto1O09131 240 aa10.69□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Pank1Q8K4K6 548 aa10.69□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Edc4Q3UJB9 1406 aaKnown RBP10.69□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Abcc6Q9R1S7 1498 aa10.69□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Ttll13A4Q9F6 804 aa10.69□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Kank1E9Q238 1360 aa10.69□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Gapvd1Q6PAR5 1458 aa10.68□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Fgd1P52734 960 aa10.68□□□□□ -0.7
Bdnf-202ENSMUST00000111042 U2surpQ6NV83 1029 aaKnown RBP10.68□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Mast1Q9R1L5 1570 aa10.68□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Tarbp1E9Q368 1579 aa10.68□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Dot1lQ6XZL8 1540 aa10.68□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Gm156Q58A37 223 aa10.67□□□□□ -0.7
Bdnf-202ENSMUST00000111042 DiexfQ8BTT6 772 aaKnown RBP10.67□□□□□ -0.7
Bdnf-202ENSMUST00000111042 MyclP10166 368 aa10.67□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Slc52a2Q9D8F3 450 aa10.67□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Irx6Q9ER75 438 aa10.67□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Iqcf3Q9D498 203 aa10.66□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Ppip5k1A2ARP1 1436 aa10.66□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Cald1E9QA15 768 aaKnown RBP10.66□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Trim58Q5NCC9 485 aa10.66□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Dnai1Q8C0M8 701 aa10.66□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Zmym4A2A791 1549 aaKnown RBP10.66□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Trpm2Q91YD4 1506 aa10.66□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Sox12Q04890 314 aa10.65□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Ccdc60Q8C4J0 545 aa10.65□□□□□ -0.7
Bdnf-202ENSMUST00000111042 Ipo8Q7TMY7 1010 aa10.64□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Liat1Q810M6 228 aa10.64□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Cdk19Q8BWD8 501 aa10.64□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Zranb1Q7M760 708 aa10.63□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Usp54Q8BL06 1588 aaKnown RBP10.63□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Kif1bQ60575 1816 aaKnown RBP10.63□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Rnf17Q99MV7 1640 aa10.62□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Kif21bQ9QXL1 1668 aa10.62□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Atxn3Q9CVD2 355 aa10.62□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Erbb3Q61526 1339 aa10.62□□□□□ -0.71
Bdnf-202ENSMUST00000111042 AatkQ80YE4 1365 aa10.62□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Map7O88735 730 aa10.62□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Sbno1Q689Z5 1390 aa10.61□□□□□ -0.71
Bdnf-202ENSMUST00000111042 G3bp1P97855 465 aaKnown RBP10.61□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Dusp27Q148W8 1138 aa10.61□□□□□ -0.71
Bdnf-202ENSMUST00000111042 FanciQ8K368 1330 aa10.61□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Tspyl2Q7TQI8 677 aa10.6□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Pibf1E9Q6K3 756 aa10.6□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Ptch1Q61115 1434 aa10.59□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms