RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Zfp444Q3TDV8 331 aaKnown RBP9.8□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Hmgn5Q9JL35 406 aa9.8□□□□□ -0.84
Scn8a-204ENSMUST00000108909 ScribQ80U72 1612 aa9.8□□□□□ -0.84
Scn8a-204ENSMUST00000108909 CalrP14211 416 aaKnown RBP9.8□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Ssh1Q76I79 1042 aa9.8□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Frmd3Q8BHD4 595 aa9.8□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Q9D2X8 372 aa9.8□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Rpgrip1lQ8CG73 1264 aa9.8□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Spag9Q58A65 1321 aaKnown RBP9.79□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Dusp27Q148W8 1138 aa9.78□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Atl3Q91YH5 541 aa9.78□□□□□ -0.84
Scn8a-204ENSMUST00000108909 G3bp1P97855 465 aaKnown RBP9.78□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Triml2E9PW10 424 aa9.78□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Cdkn1cP49919 348 aa9.78□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Plekhh1Q80TI1 1356 aa9.78□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Kif20aP97329 887 aa9.78□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Hnrnpul1Q8VDM6 859 aaKnown RBP9.78□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Nol10Q5RJG1 687 aaKnown RBP9.77□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Ankrd36D3Z4K0 1415 aa9.77□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Smc3Q9CW03 1217 aaKnown RBP9.77□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Mns1Q61884 491 aa9.77□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Rsph6aQ8CDR2 708 aa9.77□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Fez1Q8K0X8 392 aa9.77□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Ak9G3UYQ4 1894 aa9.77□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Nek4Q9Z1J2 792 aa9.77□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Chmp3Q9CQ10 224 aa9.76□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Gcom1E9PZ54 550 aa9.76□□□□□ -0.85
Scn8a-204ENSMUST00000108909 MyzapQ3UIJ9 466 aa9.76□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Ppp2r3aB2RXC8 1150 aa9.76□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Slc4a2P13808 1237 aaKnown RBP9.76□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Rpap1Q80TE0 1409 aa9.76□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Gpatch3Q8BIY1 525 aa9.76□□□□□ -0.85
Scn8a-204ENSMUST00000108909 NaspQ99MD9 773 aaKnown RBP9.76□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Rufy1Q8BIJ7 712 aa9.76□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Hmox1P14901 289 aa9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Zhx1P70121 873 aa9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Rec8Q8C5S7 591 aa9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Gm21969J3QJZ1 289 aa9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Nutm1Q8BHP2 1126 aa9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Synj1Q8CHC4 1574 aa9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Ercc6F8VPZ5 1481 aa9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Olfml1Q8BSH2 233 aa9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Gtf3c5Q8R2T8 520 aa9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Ccnb3Q810T2 1396 aa9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 PnisrA2AJT4 805 aaKnown RBP9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Zscan10Q3URR7 782 aa9.75□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Trim55G3X8Y1 545 aa9.74□□□□□ -0.85
Scn8a-204ENSMUST00000108909 1700010I14RikQ7TPG0 532 aa9.74□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Isy1Q69ZQ2 285 aaKnown RBP9.74□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Tceal9Q9DD24 104 aa9.74□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Fam184bQ0KK56 942 aa9.74□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Wdr78E9PYY5 807 aa9.74□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Babam1Q3UI43 333 aa9.74□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Sptbn5F6UCX4 1208 aa9.74□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Def6Q8C2K1 630 aa9.73□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Tpm4Q6IRU2 248 aa9.73□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Ipo7Q9EPL8 1038 aaKnown RBP9.73□□□□□ -0.85
Scn8a-204ENSMUST00000108909 UacaQ8CGB3 1411 aa9.73□□□□□ -0.85
Scn8a-204ENSMUST00000108909 CastP51125 788 aa9.73□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Fmnl2A2APV2 1086 aa9.73□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Hook1Q8BIL5 728 aa9.73□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Vgll3P85442 326 aa9.73□□□□□ -0.85
Scn8a-204ENSMUST00000108909 SkilQ60665 675 aa9.72□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Cetn4Q8K4K1 168 aa9.72□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Usp48Q3V0C5 1052 aa9.72□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Cbx1P83917 185 aaKnown RBP9.72□□□□□ -0.85
Scn8a-204ENSMUST00000108909 PdcQ9QW08 244 aa9.72□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Kif7B7ZNG0 1348 aa9.71□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Nectin2P32507 530 aa9.71□□□□□ -0.85
Scn8a-204ENSMUST00000108909 Krt82Q99M74 516 aa9.71□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Ncapd3Q6ZQK0 1506 aa9.71□□□□□ -0.86
Scn8a-204ENSMUST00000108909 GsdmaQ9EST1 446 aa9.71□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Fan1Q69ZT1 1020 aa9.71□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Srek1Q8BZX4 494 aaKnown RBP9.7□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Cplx1P63040 134 aa9.7□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Nop14Q8R3N1 860 aaKnown RBP9.7□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Ubxn4Q8VCH8 506 aa9.7□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Ccdc47Q9D024 483 aaKnown RBP9.7□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Sox12Q04890 314 aa9.7□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Trim30cD3YVI9 513 aa9.69□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Syce3B5KM66 88 aa9.69□□□□□ -0.86
Scn8a-204ENSMUST00000108909 AampJ3QN89 436 aa9.69□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Ddx11Q6AXC6 880 aa9.69□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Zkscan1Q8BGS3 561 aaKnown RBP9.69□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Smarca2Q6DIC0 1577 aa9.69□□□□□ -0.86
Scn8a-204ENSMUST00000108909 AcrbpQ3V140 540 aa9.69□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Ift57Q8BXG3 429 aa9.69□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Cep112Q5PR68 954 aa9.68□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Q8C5K5 320 aa9.68□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Stk31Q99MW1 1018 aa9.68□□□□□ -0.86
Scn8a-204ENSMUST00000108909 NcapgE9PWG6 1004 aa9.68□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Gps2Q921N8 327 aa9.68□□□□□ -0.86
Scn8a-204ENSMUST00000108909 CenpjQ569L8 1344 aa9.68□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Cog6Q8R3I3 657 aa9.68□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Dnai2A2AC93 623 aa9.68□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Gprasp1Q5U4C1 1347 aa9.68□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Cttnbp2B9EJA2 1648 aa9.68□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Ric3Q8BPM6 367 aa9.67□□□□□ -0.86
Scn8a-204ENSMUST00000108909 BbxQ8VBW5 907 aa9.67□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Cux1P53564 1515 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms