RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Col17a1Q07563 1470 aa16.56■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Abca8aQ8K442 1620 aa16.56■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Erich6D3Z6S9 713 aa16.56■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Cdc42bpgQ80UW5 1551 aa16.54■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Ptch1Q61115 1434 aa16.54■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Ccdc27Q3V036 639 aa16.54■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Prdm2A2A7B5 1709 aaKnown RBP16.53■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Kiaa0556Q8C753 1610 aa16.53■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Gli2Q0VGT2 1544 aa16.53■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Depdc5P61460 1591 aa16.53■□□□□ 0.24
Vamp1-203ENSMUST00000100942 Clasp1Q80TV8 1535 aaKnown RBP16.52■□□□□ 0.24
Vamp1-203ENSMUST00000100942 NrdcQ8BHG1 1161 aa16.51■□□□□ 0.23
Vamp1-203ENSMUST00000100942 AdgbG3UZ78 1657 aa16.51■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Cep152A2AUM9 1736 aaKnown RBP16.51■□□□□ 0.23
Vamp1-203ENSMUST00000100942 RereQ80TZ9 1558 aa16.51■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Dip2cE9PWR4 1557 aa16.5■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Trpm1Q2TV84 1622 aa16.5■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Ehbp1l1Q99MS7 1716 aa16.5■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Zbtb4Q5F293 982 aa16.5■□□□□ 0.23
Vamp1-203ENSMUST00000100942 ErbinQ80TH2 1402 aa16.5■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Cul9Q80TT8 1865 aa16.49■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Pola1P33609 1465 aa16.49■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Adgrb3Q80ZF8 1522 aa16.48■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Adgrl3Q80TS3 1537 aa16.47■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Akap12Q9WTQ5 1684 aa16.47■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Rims1Q99NE5 1463 aa16.46■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Kdm2aP59997 1161 aa16.46■□□□□ 0.23
Vamp1-203ENSMUST00000100942 PrxO55103 1391 aa16.46■□□□□ 0.23
Vamp1-203ENSMUST00000100942 AatkQ80YE4 1365 aa16.46■□□□□ 0.23
Vamp1-203ENSMUST00000100942 Kcnh8P59111 1102 aa16.45■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Gtf3c3Q3TMP1 882 aa16.45■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Stk24Q99KH8 431 aa16.45■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Cdk5rap2Q8K389 1822 aa16.45■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Myo3aQ8K3H5 1613 aa16.44■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Fgd1P52734 960 aa16.44■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Srcin1Q9QWI6 1250 aa16.44■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Itsn2Q9Z0R6 1659 aa16.44■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Ino80Q6ZPV2 1559 aa16.44■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Efcab6Q6P1E8 1516 aa16.44■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Tecpr2Q3UH45 1423 aa16.43■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Sbno1Q689Z5 1390 aa16.43■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Pank3Q8R2W9 370 aa16.43■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Myom2Q14BI5 1463 aa16.41■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Sipa1l1Q8C0T5 1782 aa16.4■□□□□ 0.22
Vamp1-203ENSMUST00000100942 Gm20521D3Z5F7 333 aa16.39■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Inpp5dQ9ES52 1191 aa16.39■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Rpgrip1lQ8CG73 1264 aa16.38■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Yeats2Q3TUF7 1407 aa16.38■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Irx3P81067 507 aa16.37■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Liat1Q810M6 228 aa16.37■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Ttc37F8VPK0 1563 aa16.37■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Talpid3E9PV87 1520 aa16.37■□□□□ 0.21
Vamp1-203ENSMUST00000100942 DnmbpQ6TXD4 1580 aa16.37■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Tmf1B9EKI3 1091 aa16.37■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Gm16486A0A1D5RMD1 1434 aa16.36■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Adamts7Q68SA9 1657 aa16.36■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Nphp4P59240 1425 aa16.36■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Zscan10Q3URR7 782 aa16.36■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Zmym4A2A791 1549 aaKnown RBP16.35■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Os9Q8K2C7 672 aa16.35■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Knl1Q66JQ7 1612 aa16.35■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Srpk2O54781 681 aaKnown RBP16.35■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Fan1Q69ZT1 1020 aa16.35■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Cfap65Q3V0B4 1847 aa16.34■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Stard8Q8K031 1019 aa16.34■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Plxnc1Q9QZC2 1574 aa16.33■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Slc4a1apE9PX68 744 aa16.33■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Gtf2e1Q9D0D5 440 aa16.33■□□□□ 0.21
Vamp1-203ENSMUST00000100942 Hecw2Q6I6G8 1578 aa16.33■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Uggt1Q6P5E4 1551 aa16.33■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Usp40Q8BWR4 1235 aa16.33■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Egfem1Q8C088 590 aa16.33■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Anp32bQ9EST5 272 aaKnown RBP16.33■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Mroh1E0CZ22 1640 aa16.32■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Q7TT23 1179 aa16.32■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Ofd1Q80Z25 1017 aa16.32■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Arid4bA2CG63 1314 aaKnown RBP16.32■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Hsp90aa1P07901 733 aaKnown RBP16.32■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Synj2Q9D2G5 1434 aa16.31■□□□□ 0.2
Vamp1-203ENSMUST00000100942 AU022751B1B0V2 589 aa16.31■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Tex14Q7M6U3 1450 aa16.31■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Ipo9Q91YE6 1041 aa16.31■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Zscan21Q07231 555 aa16.3■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Fam184bQ0KK56 942 aa16.3■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Myom1Q62234 1667 aaKnown RBP16.3■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Kdm5aQ3UXZ9 1690 aa16.3■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Puf60Q3UEB3 564 aaKnown RBP16.28■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Ift172Q6VH22 1749 aa16.28■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Ppp1r18Q8BQ30 594 aa16.27■□□□□ 0.2
Vamp1-203ENSMUST00000100942 Plcd4Q8K3R3 807 aa16.26■□□□□ 0.19
Vamp1-203ENSMUST00000100942 Skint5A7XUY5 1461 aa16.26■□□□□ 0.19
Vamp1-203ENSMUST00000100942 4933416C03RikQ3V063 378 aa16.25■□□□□ 0.19
Vamp1-203ENSMUST00000100942 ChgaP26339 463 aaKnown RBP16.24■□□□□ 0.19
Vamp1-203ENSMUST00000100942 Pknox2Q8BG99 474 aa16.24■□□□□ 0.19
Vamp1-203ENSMUST00000100942 Ppp2r1aQ76MZ3 589 aa16.24■□□□□ 0.19
Vamp1-203ENSMUST00000100942 Lrrc7Q80TE7 1490 aa16.23■□□□□ 0.19
Vamp1-203ENSMUST00000100942 Ahdc1Q6PAL7 1594 aaKnown RBP16.23■□□□□ 0.19
Vamp1-203ENSMUST00000100942 PalldQ9ET54 1408 aa16.23■□□□□ 0.19
Vamp1-203ENSMUST00000100942 L3mbtl2P59178 703 aa16.22■□□□□ 0.19
Vamp1-203ENSMUST00000100942 Mak16Q8BGS0 296 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms